RNA–Protein interactions for RNA: ENST00000471117.5

FDPS-209, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 3

Gene FDPS, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-209ENST00000471117 RPRD2Q5VT52 1461 aaKnown RBP11.95□□□□□ -0.5
FDPS-209ENST00000471117 EN1Q05925 392 aaPredicted RBP11.95□□□□□ -0.5
FDPS-209ENST00000471117 ARHGAP31Q2M1Z3 1444 aa11.94□□□□□ -0.5
FDPS-209ENST00000471117 TRPM2O94759 1503 aa11.93□□□□□ -0.5
FDPS-209ENST00000471117 CCDC144AA2RUR9 1427 aa11.93□□□□□ -0.5
FDPS-209ENST00000471117 MST1RQ04912 1400 aa11.93□□□□□ -0.5
FDPS-209ENST00000471117 PTCH1Q13635 1447 aa11.93□□□□□ -0.5
FDPS-209ENST00000471117 GLI3P10071 1580 aa11.92□□□□□ -0.5
FDPS-209ENST00000471117 PPP1R1BQ9UD71 204 aaPredicted RBP11.92□□□□□ -0.5
FDPS-209ENST00000471117 KIF1BO60333 1816 aa11.91□□□□□ -0.5
FDPS-209ENST00000471117 MYO5BQ9ULV0 1848 aa11.91□□□□□ -0.5
FDPS-209ENST00000471117 RALGAPBQ86X10 1494 aa11.91□□□□□ -0.5
FDPS-209ENST00000471117 SEPT12Q8IYM1 358 aa11.91□□□□□ -0.5
FDPS-209ENST00000471117 MARF1Q9Y4F3 1742 aaKnown RBP11.91□□□□□ -0.5
FDPS-209ENST00000471117 L3MBTL2Q969R5 705 aa11.9□□□□□ -0.5
FDPS-209ENST00000471117 CLTCL1P53675 1640 aa11.89□□□□□ -0.51
FDPS-209ENST00000471117 TBX22Q9Y458 520 aa11.89□□□□□ -0.51
FDPS-209ENST00000471117 CHD4Q14839 1912 aa11.89□□□□□ -0.51
FDPS-209ENST00000471117 PLEKHG1Q9ULL1 1385 aa11.89□□□□□ -0.51
FDPS-209ENST00000471117 NOS1P29475 1434 aa11.87□□□□□ -0.51
FDPS-209ENST00000471117 ADGRB3O60242 1522 aa11.87□□□□□ -0.51
FDPS-209ENST00000471117 KRT27Q7Z3Y8 459 aa11.87□□□□□ -0.51
FDPS-209ENST00000471117 DIEXFQ68CQ4 756 aaKnown RBP11.86□□□□□ -0.51
FDPS-209ENST00000471117 AMOTL2Q9Y2J4 779 aa11.86□□□□□ -0.51
FDPS-209ENST00000471117 CEP350Q5VT06 3117 aa11.86□□□□□ -0.51
FDPS-209ENST00000471117 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.86□□□□□ -0.51
FDPS-209ENST00000471117 DCCP43146 1447 aa11.86□□□□□ -0.51
FDPS-209ENST00000471117 EZH2Q15910 746 aaKnown RBP11.85□□□□□ -0.51
FDPS-209ENST00000471117 UNC5CLQ8IV45 518 aa11.85□□□□□ -0.51
FDPS-209ENST00000471117 ZFYVE9O95405 1425 aa11.84□□□□□ -0.51
FDPS-209ENST00000471117 RIMS2Q9UQ26 1411 aa11.84□□□□□ -0.51
FDPS-209ENST00000471117 RGPD1P0DJD0 1748 aa11.83□□□□□ -0.52
FDPS-209ENST00000471117 COL22A1Q8NFW1 1626 aaPredicted RBP11.83□□□□□ -0.52
FDPS-209ENST00000471117 NINLQ9Y2I6 1382 aa11.83□□□□□ -0.52
FDPS-209ENST00000471117 SLC52A1Q9NWF4 448 aa11.83□□□□□ -0.52
FDPS-209ENST00000471117 SPATA31E1Q6ZUB1 1445 aa11.83□□□□□ -0.52
FDPS-209ENST00000471117 ADAMTS13Q76LX8 1427 aa11.83□□□□□ -0.52
FDPS-209ENST00000471117 PTPRUQ92729 1446 aa11.83□□□□□ -0.52
FDPS-209ENST00000471117 SOS2Q07890 1332 aaPredicted RBP11.83□□□□□ -0.52
FDPS-209ENST00000471117 A0A0G2JS52 829 aa11.82□□□□□ -0.52
FDPS-209ENST00000471117 GIGYF1O75420 1035 aaPredicted RBP11.82□□□□□ -0.52
FDPS-209ENST00000471117 CAPN15O75808 1086 aa11.82□□□□□ -0.52
FDPS-209ENST00000471117 MYT1Q01538 1121 aa11.82□□□□□ -0.52
FDPS-209ENST00000471117 FAM182BQ5T319 152 aa11.82□□□□□ -0.52
FDPS-209ENST00000471117 CCDC9Q9Y3X0 531 aaKnown RBP11.82□□□□□ -0.52
FDPS-209ENST00000471117 MYOM2P54296 1465 aa11.82□□□□□ -0.52
FDPS-209ENST00000471117 CHGAP10645 457 aaKnown RBP11.81□□□□□ -0.52
FDPS-209ENST00000471117 NBPF8Q3BBV2 869 aa11.81□□□□□ -0.52
FDPS-209ENST00000471117 RGL3Q3MIN7 710 aa11.81□□□□□ -0.52
FDPS-209ENST00000471117 SPON1Q9HCB6 807 aa11.81□□□□□ -0.52
FDPS-209ENST00000471117 ORAI2Q96SN7 254 aa11.8□□□□□ -0.52
FDPS-209ENST00000471117 TMEM131LA2VDJ0 1609 aa11.79□□□□□ -0.52
FDPS-209ENST00000471117 LAMC1P11047 1609 aa11.79□□□□□ -0.52
FDPS-209ENST00000471117 HDGFP51858 240 aaKnown RBP11.79□□□□□ -0.52
FDPS-209ENST00000471117 DCAF11Q8TEB1 546 aa11.79□□□□□ -0.52
FDPS-209ENST00000471117 IFT172Q9UG01 1749 aa11.79□□□□□ -0.52
FDPS-209ENST00000471117 PIK3R4Q99570 1358 aa11.79□□□□□ -0.52
FDPS-209ENST00000471117 TNS1Q9HBL0 1735 aaKnown RBP11.78□□□□□ -0.52
FDPS-209ENST00000471117 PPLO60437 1756 aa11.78□□□□□ -0.52
FDPS-209ENST00000471117 KCNQ2O43526 872 aa11.78□□□□□ -0.52
FDPS-209ENST00000471117 ZNF326Q5BKZ1 582 aaKnown RBP11.78□□□□□ -0.52
FDPS-209ENST00000471117 STAC3Q96MF2 364 aa11.78□□□□□ -0.52
FDPS-209ENST00000471117 KDM2AQ9Y2K7 1162 aa11.78□□□□□ -0.52
FDPS-209ENST00000471117 ADGRL3Q9HAR2 1447 aa11.77□□□□□ -0.52
FDPS-209ENST00000471117 C1orf167Q5SNV9 1468 aa11.77□□□□□ -0.52
FDPS-209ENST00000471117 SLIT2O94813 1529 aa11.77□□□□□ -0.52
FDPS-209ENST00000471117 RPGRIP1LQ68CZ1 1315 aa11.77□□□□□ -0.53
FDPS-209ENST00000471117 NALCNQ8IZF0 1738 aa11.77□□□□□ -0.53
FDPS-209ENST00000471117 ONECUT3O60422 494 aaPredicted RBP11.76□□□□□ -0.53
FDPS-209ENST00000471117 CAMKK2Q96RR4 588 aa11.76□□□□□ -0.53
FDPS-209ENST00000471117 HIRIP3Q9BW71 556 aaPredicted RBP11.76□□□□□ -0.53
FDPS-209ENST00000471117 SLC34A2O95436 690 aa11.75□□□□□ -0.53
FDPS-209ENST00000471117 XPCQ01831 940 aaPredicted RBP11.75□□□□□ -0.53
FDPS-209ENST00000471117 XRN1Q8IZH2 1706 aaKnown RBP11.74□□□□□ -0.53
FDPS-209ENST00000471117 HSPA5P11021 654 aaKnown RBP11.74□□□□□ -0.53
FDPS-209ENST00000471117 VPS72Q15906 364 aa11.74□□□□□ -0.53
FDPS-209ENST00000471117 PRAG1Q86YV5 1406 aa11.74□□□□□ -0.53
FDPS-209ENST00000471117 DISP2A7MBM2 1401 aa11.73□□□□□ -0.53
FDPS-209ENST00000471117 EIF4G2P78344 907 aaKnown RBP eCLIP11.73□□□□□ -0.53
FDPS-209ENST00000471117 NEXMIFQ5QGS0 1516 aa11.73□□□□□ -0.53
FDPS-209ENST00000471117 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.73□□□□□ -0.53
FDPS-209ENST00000471117 NUP188Q5SRE5 1749 aa11.72□□□□□ -0.53
FDPS-209ENST00000471117 TRPM1Q7Z4N2 1603 aa11.72□□□□□ -0.53
FDPS-209ENST00000471117 FAM98CQ17RN3 349 aaKnown RBP11.72□□□□□ -0.53
FDPS-209ENST00000471117 KIAA1210Q9ULL0 1709 aa11.72□□□□□ -0.53
FDPS-209ENST00000471117 PLEKHG5O94827 1062 aa11.71□□□□□ -0.53
FDPS-209ENST00000471117 TRIM37O94972 964 aa11.71□□□□□ -0.53
FDPS-209ENST00000471117 NBPF14Q5TI25 921 aa11.71□□□□□ -0.53
FDPS-209ENST00000471117 VGFO15240 615 aaPredicted RBP11.7□□□□□ -0.54
FDPS-209ENST00000471117 APBA3O96018 575 aa11.7□□□□□ -0.54
FDPS-209ENST00000471117 NRKQ7Z2Y5 1582 aa11.7□□□□□ -0.54
FDPS-209ENST00000471117 NRXN1Q9ULB1 1477 aa11.7□□□□□ -0.54
FDPS-209ENST00000471117 PLCH1Q4KWH8 1693 aa11.69□□□□□ -0.54
FDPS-209ENST00000471117 RREB1Q92766 1687 aa11.69□□□□□ -0.54
FDPS-209ENST00000471117 MYOM1P52179 1685 aa11.68□□□□□ -0.54
FDPS-209ENST00000471117 ADGRF5Q8IZF2 1346 aa11.68□□□□□ -0.54
FDPS-209ENST00000471117 DDX10Q13206 875 aaKnown RBP11.68□□□□□ -0.54
FDPS-209ENST00000471117 MIER1Q8N108 512 aa11.68□□□□□ -0.54
FDPS-209ENST00000471117 NRXN3Q9Y4C0 1643 aa11.68□□□□□ -0.54
FDPS-209ENST00000471117 ROCK2O75116 1388 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms