RNA–Protein interactions for RNA: ENST00000471047.1

CLK2-204, Transcript of CDC like kinase 2, humanhuman

TSL 3

Gene CLK2, Length 701 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-204ENST00000471047 QTRT2Q9H974 415 aaKnown RBP13.95□□□□□ -0.18
CLK2-204ENST00000471047 ADAMTS13Q76LX8 1427 aa13.94□□□□□ -0.18
CLK2-204ENST00000471047 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.94□□□□□ -0.18
CLK2-204ENST00000471047 ADGRF5Q8IZF2 1346 aa13.93□□□□□ -0.18
CLK2-204ENST00000471047 RBM6P78332 1123 aaKnown RBP13.93□□□□□ -0.18
CLK2-204ENST00000471047 PIK3C2GO75747 1445 aa13.92□□□□□ -0.18
CLK2-204ENST00000471047 EIF4G2P78344 907 aaKnown RBP eCLIP13.92□□□□□ -0.18
CLK2-204ENST00000471047 HSPA5P11021 654 aaKnown RBP13.91□□□□□ -0.18
CLK2-204ENST00000471047 DDX17Q92841 729 aaKnown RBP13.91□□□□□ -0.18
CLK2-204ENST00000471047 ROCK2O75116 1388 aaKnown RBP13.91□□□□□ -0.18
CLK2-204ENST00000471047 PTPRUQ92729 1446 aa13.9□□□□□ -0.18
CLK2-204ENST00000471047 ASXL1Q8IXJ9 1541 aa13.9□□□□□ -0.18
CLK2-204ENST00000471047 VGFO15240 615 aaPredicted RBP13.9□□□□□ -0.18
CLK2-204ENST00000471047 NBPF1Q3BBV0 1214 aa13.9□□□□□ -0.18
CLK2-204ENST00000471047 SETBP1Q9Y6X0 1596 aa13.89□□□□□ -0.19
CLK2-204ENST00000471047 PNPLA6Q8IY17 1366 aa13.89□□□□□ -0.19
CLK2-204ENST00000471047 HDGFP51858 240 aaKnown RBP13.89□□□□□ -0.19
CLK2-204ENST00000471047 CARD11Q9BXL7 1154 aa13.89□□□□□ -0.19
CLK2-204ENST00000471047 AMOTL2Q9Y2J4 779 aa13.89□□□□□ -0.19
CLK2-204ENST00000471047 USP47Q96K76 1375 aa13.88□□□□□ -0.19
CLK2-204ENST00000471047 ADAMTS2O95450 1211 aa13.88□□□□□ -0.19
CLK2-204ENST00000471047 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.88□□□□□ -0.19
CLK2-204ENST00000471047 EP400Q96L91 3159 aa13.87□□□□□ -0.19
CLK2-204ENST00000471047 ATAD2Q6PL18 1390 aa13.87□□□□□ -0.19
CLK2-204ENST00000471047 PIK3R4Q99570 1358 aa13.87□□□□□ -0.19
CLK2-204ENST00000471047 LRRC59Q96AG4 307 aaKnown RBP13.87□□□□□ -0.19
CLK2-204ENST00000471047 ZRANB1Q9UGI0 708 aa13.87□□□□□ -0.19
CLK2-204ENST00000471047 MST1RQ04912 1400 aa13.87□□□□□ -0.19
CLK2-204ENST00000471047 CFAP70Q5T0N1 1121 aa13.86□□□□□ -0.19
CLK2-204ENST00000471047 NGLY1Q96IV0 654 aa13.86□□□□□ -0.19
CLK2-204ENST00000471047 C14orf93Q9H972 538 aaKnown RBP13.86□□□□□ -0.19
CLK2-204ENST00000471047 ADGRB1O14514 1584 aa13.86□□□□□ -0.19
CLK2-204ENST00000471047 DCCP43146 1447 aa13.85□□□□□ -0.19
CLK2-204ENST00000471047 HIRIP3Q9BW71 556 aaPredicted RBP13.85□□□□□ -0.19
CLK2-204ENST00000471047 NHSL1Q5SYE7 1610 aa13.82□□□□□ -0.2
CLK2-204ENST00000471047 NRXN3Q9Y4C0 1643 aa13.82□□□□□ -0.2
CLK2-204ENST00000471047 USP21Q9UK80 565 aa13.82□□□□□ -0.2
CLK2-204ENST00000471047 ST20-MTHFSA0A0A6YYL1 179 aa13.8□□□□□ -0.2
CLK2-204ENST00000471047 C11orf95C9JLR9 678 aaPredicted RBP13.79□□□□□ -0.2
CLK2-204ENST00000471047 TRPC5Q9UL62 973 aaPredicted RBP13.79□□□□□ -0.2
CLK2-204ENST00000471047 WASHC2AQ641Q2 1341 aa13.79□□□□□ -0.2
CLK2-204ENST00000471047 DIEXFQ68CQ4 756 aaKnown RBP13.78□□□□□ -0.2
CLK2-204ENST00000471047 TESK2Q96S53 571 aa13.78□□□□□ -0.2
CLK2-204ENST00000471047 METP08581 1390 aa13.78□□□□□ -0.2
CLK2-204ENST00000471047 ATRNO75882 1429 aa13.78□□□□□ -0.2
CLK2-204ENST00000471047 ADGRL3Q9HAR2 1447 aa13.78□□□□□ -0.2
CLK2-204ENST00000471047 XRN1Q8IZH2 1706 aaKnown RBP13.78□□□□□ -0.2
CLK2-204ENST00000471047 FNBP4Q8N3X1 1017 aaPredicted RBP13.77□□□□□ -0.21
CLK2-204ENST00000471047 CCDC7Q96M83 1385 aa13.77□□□□□ -0.21
CLK2-204ENST00000471047 EIF3AQ14152 1382 aaKnown RBP13.76□□□□□ -0.21
CLK2-204ENST00000471047 ARHGEF28Q8N1W1 1705 aaKnown RBP13.76□□□□□ -0.21
CLK2-204ENST00000471047 C1orf167Q5SNV9 1468 aa13.75□□□□□ -0.21
CLK2-204ENST00000471047 TMEM132EQ6IEE7 984 aa13.75□□□□□ -0.21
CLK2-204ENST00000471047 ORAI2Q96SN7 254 aa13.75□□□□□ -0.21
CLK2-204ENST00000471047 SBNO2Q9Y2G9 1366 aa13.74□□□□□ -0.21
CLK2-204ENST00000471047 SOS2Q07890 1332 aaPredicted RBP13.74□□□□□ -0.21
CLK2-204ENST00000471047 KIF7Q2M1P5 1343 aa13.74□□□□□ -0.21
CLK2-204ENST00000471047 PTCH1Q13635 1447 aa13.73□□□□□ -0.21
CLK2-204ENST00000471047 YTHDC2Q9H6S0 1430 aaKnown RBP13.73□□□□□ -0.21
CLK2-204ENST00000471047 CCDC125Q86Z20 511 aa13.73□□□□□ -0.21
CLK2-204ENST00000471047 DLC1Q96QB1 1528 aa13.72□□□□□ -0.21
CLK2-204ENST00000471047 LRPPRCP42704 1394 aaKnown RBP13.71□□□□□ -0.21
CLK2-204ENST00000471047 KNDC1Q76NI1 1749 aa13.71□□□□□ -0.21
CLK2-204ENST00000471047 SLC24A1O60721 1099 aa13.71□□□□□ -0.21
CLK2-204ENST00000471047 DDX10Q13206 875 aaKnown RBP13.71□□□□□ -0.21
CLK2-204ENST00000471047 DEFB132Q7Z7B7 95 aa13.71□□□□□ -0.21
CLK2-204ENST00000471047 TRAK1Q9UPV9 953 aa13.71□□□□□ -0.21
CLK2-204ENST00000471047 BCL9LQ86UU0 1499 aa13.71□□□□□ -0.21
CLK2-204ENST00000471047 QRICH2Q9H0J4 1663 aa13.71□□□□□ -0.21
CLK2-204ENST00000471047 NALCNQ8IZF0 1738 aa13.7□□□□□ -0.22
CLK2-204ENST00000471047 ABCC11Q96J66 1382 aa13.7□□□□□ -0.22
CLK2-204ENST00000471047 CENPJQ9HC77 1338 aaPredicted RBP13.69□□□□□ -0.22
CLK2-204ENST00000471047 GJD4Q96KN9 370 aaPredicted RBP13.69□□□□□ -0.22
CLK2-204ENST00000471047 TECPR2O15040 1411 aa13.69□□□□□ -0.22
CLK2-204ENST00000471047 TMF1P82094 1093 aa13.68□□□□□ -0.22
CLK2-204ENST00000471047 BLMP54132 1417 aaPredicted RBP13.67□□□□□ -0.22
CLK2-204ENST00000471047 ROBO2Q9HCK4 1378 aa13.67□□□□□ -0.22
CLK2-204ENST00000471047 SIRT1Q96EB6 747 aa13.66□□□□□ -0.22
CLK2-204ENST00000471047 XPCQ01831 940 aaPredicted RBP13.65□□□□□ -0.22
CLK2-204ENST00000471047 STK26Q9P289 416 aa13.65□□□□□ -0.22
CLK2-204ENST00000471047 COL22A1Q8NFW1 1626 aaPredicted RBP13.64□□□□□ -0.23
CLK2-204ENST00000471047 PSDA5PKW4 1024 aaPredicted RBP13.64□□□□□ -0.23
CLK2-204ENST00000471047 CDCA8Q53HL2 280 aa13.64□□□□□ -0.23
CLK2-204ENST00000471047 TULP4Q9NRJ4 1543 aa13.64□□□□□ -0.23
CLK2-204ENST00000471047 MYOM1P52179 1685 aa13.63□□□□□ -0.23
CLK2-204ENST00000471047 PRAM1Q96QH2 718 aa13.63□□□□□ -0.23
CLK2-204ENST00000471047 GLI3P10071 1580 aa13.62□□□□□ -0.23
CLK2-204ENST00000471047 LRP5O75197 1615 aa13.62□□□□□ -0.23
CLK2-204ENST00000471047 UNC5CLQ8IV45 518 aa13.62□□□□□ -0.23
CLK2-204ENST00000471047 PUS7Q96PZ0 661 aaKnown RBP13.62□□□□□ -0.23
CLK2-204ENST00000471047 PXDNQ92626 1479 aa13.61□□□□□ -0.23
CLK2-204ENST00000471047 ESCO1Q5FWF5 840 aa13.61□□□□□ -0.23
CLK2-204ENST00000471047 NPHP3Q7Z494 1330 aa13.61□□□□□ -0.23
CLK2-204ENST00000471047 PLEKHH1Q9ULM0 1364 aa13.6□□□□□ -0.23
CLK2-204ENST00000471047 FOXO3O43524 673 aa13.6□□□□□ -0.23
CLK2-204ENST00000471047 SF3B2Q13435 895 aaKnown RBP13.6□□□□□ -0.23
CLK2-204ENST00000471047 SEPT12Q8IYM1 358 aa13.6□□□□□ -0.23
CLK2-204ENST00000471047 MIER1Q8N108 512 aa13.6□□□□□ -0.23
CLK2-204ENST00000471047 SLIT2O94813 1529 aa13.59□□□□□ -0.23
CLK2-204ENST00000471047 WAPLQ7Z5K2 1190 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms