RNA–Protein interactions for RNA: ENST00000470965.1

HDAC10-208, Transcript of histone deacetylase 10, human

TSL 5

Gene HDAC10, Length 810 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC10-208	ENST00000470965	POGK	Q9P215	609 aa		28.56	■■■□□ 2.16
HDAC10-208	ENST00000470965	TIMELESS	Q9UNS1	1208 aa		28.56	■■■□□ 2.16
HDAC10-208	ENST00000470965	CDC42BPG	Q6DT37	1551 aa		28.55	■■■□□ 2.16
HDAC10-208	ENST00000470965	CCER1	Q8TC90	406 aa	Predicted RBP	28.55	■■■□□ 2.16
HDAC10-208	ENST00000470965	NBPF1	Q3BBV0	1214 aa		28.54	■■■□□ 2.16
HDAC10-208	ENST00000470965	ROBO1	Q9Y6N7	1651 aa		28.52	■■■□□ 2.16
HDAC10-208	ENST00000470965	HSPA1L	P34931	641 aa		28.52	■■■□□ 2.16
HDAC10-208	ENST00000470965	TRPM1	Q7Z4N2	1603 aa		28.5	■■■□□ 2.15
HDAC10-208	ENST00000470965	NBPF8	Q3BBV2	869 aa		28.49	■■■□□ 2.15
HDAC10-208	ENST00000470965	ROCK2	O75116	1388 aa	Known RBP	28.49	■■■□□ 2.15
HDAC10-208	ENST00000470965	C1orf167	Q5SNV9	1468 aa		28.48	■■■□□ 2.15
HDAC10-208	ENST00000470965	SAFB2	Q14151	953 aa	Known RBP eCLIP	28.46	■■■□□ 2.15
HDAC10-208	ENST00000470965	BRINP3	Q76B58	766 aa		28.46	■■■□□ 2.15
HDAC10-208	ENST00000470965	GPRASP1	Q5JY77	1395 aa		28.46	■■■□□ 2.15
HDAC10-208	ENST00000470965	ARHGEF28	Q8N1W1	1705 aa	Known RBP	28.45	■■■□□ 2.14
HDAC10-208	ENST00000470965	ADGRB2	O60241	1585 aa		28.45	■■■□□ 2.14
HDAC10-208	ENST00000470965	RALGAPB	Q86X10	1494 aa		28.43	■■■□□ 2.14
HDAC10-208	ENST00000470965	AHDC1	Q5TGY3	1603 aa	Predicted RBP	28.4	■■■□□ 2.14
HDAC10-208	ENST00000470965	EIF3A	Q14152	1382 aa	Known RBP	28.4	■■■□□ 2.14
HDAC10-208	ENST00000470965	MINK1	Q8N4C8	1332 aa	Predicted RBP	28.39	■■■□□ 2.13
HDAC10-208	ENST00000470965	FMN2	Q9NZ56	1722 aa		28.38	■■■□□ 2.13
HDAC10-208	ENST00000470965	CENPJ	Q9HC77	1338 aa	Predicted RBP	28.38	■■■□□ 2.13
HDAC10-208	ENST00000470965	ANKAR	Q7Z5J8	1434 aa		28.36	■■■□□ 2.13
HDAC10-208	ENST00000470965	CARD11	Q9BXL7	1154 aa		28.36	■■■□□ 2.13
HDAC10-208	ENST00000470965	WASL	O00401	505 aa	Predicted RBP	28.35	■■■□□ 2.13
HDAC10-208	ENST00000470965	ORAI2	Q96SN7	254 aa		28.35	■■■□□ 2.13
HDAC10-208	ENST00000470965	ESCO1	Q5FWF5	840 aa		28.34	■■■□□ 2.13
HDAC10-208	ENST00000470965	HIRIP3	Q9BW71	556 aa	Predicted RBP	28.34	■■■□□ 2.13
HDAC10-208	ENST00000470965	PHLPP1	O60346	1717 aa		28.33	■■■□□ 2.13
HDAC10-208	ENST00000470965	NUTM2F	A1L443	756 aa		28.31	■■■□□ 2.12
HDAC10-208	ENST00000470965	NHSL1	Q5SYE7	1610 aa		28.31	■■■□□ 2.12
HDAC10-208	ENST00000470965	COL16A1	Q07092	1604 aa	Predicted RBP	28.3	■■■□□ 2.12
HDAC10-208	ENST00000470965	TULP4	Q9NRJ4	1543 aa		28.3	■■■□□ 2.12
HDAC10-208	ENST00000470965	NPHP3	Q7Z494	1330 aa		28.29	■■■□□ 2.12
HDAC10-208	ENST00000470965	JCAD	Q9P266	1359 aa		28.27	■■■□□ 2.12
HDAC10-208	ENST00000470965	KIF1A	Q12756	1690 aa		28.26	■■■□□ 2.11
HDAC10-208	ENST00000470965	SOS2	Q07890	1332 aa	Predicted RBP	28.25	■■■□□ 2.11
HDAC10-208	ENST00000470965	LRRC59	Q96AG4	307 aa	Known RBP	28.25	■■■□□ 2.11
HDAC10-208	ENST00000470965	PHF8	Q9UPP1	1060 aa		28.25	■■■□□ 2.11
HDAC10-208	ENST00000470965	SBNO2	Q9Y2G9	1366 aa		28.24	■■■□□ 2.11
HDAC10-208	ENST00000470965	CDK19	Q9BWU1	502 aa		28.24	■■■□□ 2.11
HDAC10-208	ENST00000470965	QRICH2	Q9H0J4	1663 aa		28.23	■■■□□ 2.11
HDAC10-208	ENST00000470965	PRR36	Q9H6K5	1346 aa		28.22	■■■□□ 2.11
HDAC10-208	ENST00000470965	DDX17	Q92841	729 aa	Known RBP	28.22	■■■□□ 2.11
HDAC10-208	ENST00000470965	USP32	Q8NFA0	1604 aa		28.21	■■■□□ 2.11
HDAC10-208	ENST00000470965	FOXO3	O43524	673 aa		28.21	■■■□□ 2.11
HDAC10-208	ENST00000470965	ATP7B	P35670	1465 aa		28.21	■■■□□ 2.11
HDAC10-208	ENST00000470965	EVC2	Q86UK5	1308 aa		28.2	■■■□□ 2.11
HDAC10-208	ENST00000470965	NUDT16	Q96DE0	195 aa	Known RBP	28.2	■■■□□ 2.1
HDAC10-208	ENST00000470965	PXDN	Q92626	1479 aa		28.17	■■■□□ 2.1
HDAC10-208	ENST00000470965	SLC24A1	O60721	1099 aa		28.17	■■■□□ 2.1
HDAC10-208	ENST00000470965	SRPK2	P78362	688 aa	Known RBP	28.17	■■■□□ 2.1
HDAC10-208	ENST00000470965	CCDC61	Q9Y6R9	512 aa		28.17	■■■□□ 2.1
HDAC10-208	ENST00000470965	SPATA31A6	Q5VVP1	1343 aa		28.17	■■■□□ 2.1
HDAC10-208	ENST00000470965	RGPD8	O14715	1765 aa	Predicted RBP	28.14	■■■□□ 2.1
HDAC10-208	ENST00000470965	SHPRH	Q149N8	1683 aa		28.14	■■■□□ 2.1
HDAC10-208	ENST00000470965	PSME1	Q06323	249 aa		28.14	■■■□□ 2.1
HDAC10-208	ENST00000470965	ITSN1	Q15811	1721 aa		28.13	■■■□□ 2.09
HDAC10-208	ENST00000470965	PMFBP1	Q8TBY8	1022 aa		28.13	■■■□□ 2.09
HDAC10-208	ENST00000470965	KRT28	Q7Z3Y7	464 aa		28.12	■■■□□ 2.09
HDAC10-208	ENST00000470965	PNPLA6	Q8IY17	1366 aa		28.11	■■■□□ 2.09
HDAC10-208	ENST00000470965	USP47	Q96K76	1375 aa		28.11	■■■□□ 2.09
HDAC10-208	ENST00000470965	CABP2	Q9NPB3	220 aa		28.11	■■■□□ 2.09
HDAC10-208	ENST00000470965	MED1	Q15648	1581 aa	Predicted RBP	28.11	■■■□□ 2.09
HDAC10-208	ENST00000470965	PLEKHG3	A1L390	1219 aa		28.1	■■■□□ 2.09
HDAC10-208	ENST00000470965	NGDN	Q8NEJ9	315 aa	Known RBP	28.1	■■■□□ 2.09
HDAC10-208	ENST00000470965	SBNO1	A3KN83	1393 aa		28.1	■■■□□ 2.09
HDAC10-208	ENST00000470965	ST20-MTHFS	A0A0A6YYL1	179 aa		28.09	■■■□□ 2.09
HDAC10-208	ENST00000470965	TOPAZ1	Q8N9V7	1692 aa		28.09	■■■□□ 2.09
HDAC10-208	ENST00000470965	XPC	Q01831	940 aa	Predicted RBP	28.08	■■■□□ 2.09
HDAC10-208	ENST00000470965	ATAD2	Q6PL18	1390 aa		28.08	■■■□□ 2.09
HDAC10-208	ENST00000470965	POLR3A	O14802	1390 aa	Predicted RBP	28.07	■■■□□ 2.08
HDAC10-208	ENST00000470965	PUS7	Q96PZ0	661 aa	Known RBP	28.06	■■■□□ 2.08
HDAC10-208	ENST00000470965	TESK2	Q96S53	571 aa		28.06	■■■□□ 2.08
HDAC10-208	ENST00000470965	SPATA31A3	Q5VYP0	1347 aa		28.06	■■■□□ 2.08
HDAC10-208	ENST00000470965	PPIP5K1	Q6PFW1	1433 aa		28.06	■■■□□ 2.08
HDAC10-208	ENST00000470965	TNS3	Q68CZ2	1445 aa		28.04	■■■□□ 2.08
HDAC10-208	ENST00000470965	DISP3	Q9P2K9	1392 aa		28.02	■■■□□ 2.08
HDAC10-208	ENST00000470965	ACE	P12821	1306 aa		28.02	■■■□□ 2.08
HDAC10-208	ENST00000470965	ARHGEF10	O15013	1369 aa		28.01	■■■□□ 2.07
HDAC10-208	ENST00000470965	COL22A1	Q8NFW1	1626 aa	Predicted RBP	28	■■■□□ 2.07
HDAC10-208	ENST00000470965	BRD4	O60885	1362 aa	Predicted RBP	27.99	■■■□□ 2.07
HDAC10-208	ENST00000470965	CABP1	Q9NZU7	370 aa		27.99	■■■□□ 2.07
HDAC10-208	ENST00000470965	PHF23	Q9BUL5	403 aa	Predicted RBP	27.98	■■■□□ 2.07
HDAC10-208	ENST00000470965	LRP6	O75581	1613 aa		27.98	■■■□□ 2.07
HDAC10-208	ENST00000470965	TMF1	P82094	1093 aa		27.97	■■■□□ 2.07
HDAC10-208	ENST00000470965	NUTM2B	A6NNL0	878 aa	Predicted RBP	27.96	■■■□□ 2.07
HDAC10-208	ENST00000470965	NUTM2E	B1AL46	878 aa	Predicted RBP	27.96	■■■□□ 2.07
HDAC10-208	ENST00000470965	NUTM2A	Q8IVF1	878 aa	Predicted RBP	27.96	■■■□□ 2.07
HDAC10-208	ENST00000470965	TRPM3	Q9HCF6	1732 aa	Predicted RBP	27.95	■■■□□ 2.07
HDAC10-208	ENST00000470965	EIF4G2	P78344	907 aa	Known RBP eCLIP	27.95	■■■□□ 2.06
HDAC10-208	ENST00000470965	MEX3C	Q5U5Q3	659 aa	Known RBP	27.95	■■■□□ 2.06
HDAC10-208	ENST00000470965	ZNF692	Q9BU19	519 aa	Predicted RBP	27.94	■■■□□ 2.06
HDAC10-208	ENST00000470965	CDCA8	Q53HL2	280 aa		27.93	■■■□□ 2.06
HDAC10-208	ENST00000470965	NINL	Q9Y2I6	1382 aa		27.92	■■■□□ 2.06
HDAC10-208	ENST00000470965	LMOD2	Q6P5Q4	547 aa		27.92	■■■□□ 2.06
HDAC10-208	ENST00000470965	PAK3	O75914	559 aa	Predicted RBP	27.91	■■■□□ 2.06
HDAC10-208	ENST00000470965	USP6	P35125	1406 aa		27.9	■■■□□ 2.06
HDAC10-208	ENST00000470965	ALS2	Q96Q42	1657 aa		27.89	■■■□□ 2.06
HDAC10-208	ENST00000470965	CPSF1	Q10570	1443 aa	Known RBP	27.88	■■■□□ 2.05

Retrieved 100 of 20,778 RNA–protein pairs in 38 ms