RNA–Protein interactions for RNA: ENST00000470171.5

FDPS-208, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-208ENST00000470171 MED1Q15648 1581 aaPredicted RBP22.26■■□□□ 1.15
FDPS-208ENST00000470171 KNDC1Q76NI1 1749 aa22.26■■□□□ 1.15
FDPS-208ENST00000470171 EIF3AQ14152 1382 aaKnown RBP22.25■■□□□ 1.15
FDPS-208ENST00000470171 NPHP3Q7Z494 1330 aa22.25■■□□□ 1.15
FDPS-208ENST00000470171 ADGRB1O14514 1584 aa22.25■■□□□ 1.15
FDPS-208ENST00000470171 ESCO1Q5FWF5 840 aa22.23■■□□□ 1.15
FDPS-208ENST00000470171 SOS2Q07890 1332 aaPredicted RBP22.23■■□□□ 1.15
FDPS-208ENST00000470171 NALCNQ8IZF0 1738 aa22.23■■□□□ 1.15
FDPS-208ENST00000470171 TRAK1Q9UPV9 953 aa22.22■■□□□ 1.15
FDPS-208ENST00000470171 PHLPP1O60346 1717 aa22.22■■□□□ 1.15
FDPS-208ENST00000470171 PLEKHH1Q9ULM0 1364 aa22.22■■□□□ 1.15
FDPS-208ENST00000470171 ORAI2Q96SN7 254 aa22.21■■□□□ 1.15
FDPS-208ENST00000470171 COL16A1Q07092 1604 aaPredicted RBP22.2■■□□□ 1.15
FDPS-208ENST00000470171 L3MBTL2Q969R5 705 aa22.2■■□□□ 1.14
FDPS-208ENST00000470171 ANKARQ7Z5J8 1434 aa22.17■■□□□ 1.14
FDPS-208ENST00000470171 PSME1Q06323 249 aa22.15■■□□□ 1.14
FDPS-208ENST00000470171 NEUROD1Q13562 356 aa22.15■■□□□ 1.14
FDPS-208ENST00000470171 SIN3AQ96ST3 1273 aa22.15■■□□□ 1.14
FDPS-208ENST00000470171 WASLO00401 505 aaPredicted RBP22.14■■□□□ 1.13
FDPS-208ENST00000470171 NHSL1Q5SYE7 1610 aa22.13■■□□□ 1.13
FDPS-208ENST00000470171 MEX3CQ5U5Q3 659 aaKnown RBP22.13■■□□□ 1.13
FDPS-208ENST00000470171 PHF8Q9UPP1 1060 aa22.13■■□□□ 1.13
FDPS-208ENST00000470171 KIAA1210Q9ULL0 1709 aa22.12■■□□□ 1.13
FDPS-208ENST00000470171 FOXO3O43524 673 aa22.12■■□□□ 1.13
FDPS-208ENST00000470171 SAFB2Q14151 953 aaKnown RBP eCLIP22.12■■□□□ 1.13
FDPS-208ENST00000470171 ZNF772Q68DY9 489 aaPredicted RBP22.12■■□□□ 1.13
FDPS-208ENST00000470171 ILDR2Q71H61 639 aa22.11■■□□□ 1.13
FDPS-208ENST00000470171 PNPLA6Q8IY17 1366 aa22.11■■□□□ 1.13
FDPS-208ENST00000470171 SOCS7O14512 581 aa22.1■■□□□ 1.13
FDPS-208ENST00000470171 ADGRB2O60241 1585 aa22.1■■□□□ 1.13
FDPS-208ENST00000470171 SHPRHQ149N8 1683 aa22.1■■□□□ 1.13
FDPS-208ENST00000470171 CLSPNQ9HAW4 1339 aa22.09■■□□□ 1.13
FDPS-208ENST00000470171 TONSLQ96HA7 1378 aa22.09■■□□□ 1.13
FDPS-208ENST00000470171 NUTM2FA1L443 756 aa22.08■■□□□ 1.13
FDPS-208ENST00000470171 NBPF1Q3BBV0 1214 aa22.08■■□□□ 1.13
FDPS-208ENST00000470171 DDX17Q92841 729 aaKnown RBP22.08■■□□□ 1.13
FDPS-208ENST00000470171 MINK1Q8N4C8 1332 aaPredicted RBP22.07■■□□□ 1.12
FDPS-208ENST00000470171 KRT28Q7Z3Y7 464 aa22.06■■□□□ 1.12
FDPS-208ENST00000470171 RGS17Q9UGC6 210 aaPredicted RBP22.06■■□□□ 1.12
FDPS-208ENST00000470171 TIMELESSQ9UNS1 1208 aa22.06■■□□□ 1.12
FDPS-208ENST00000470171 CENPJQ9HC77 1338 aaPredicted RBP22.06■■□□□ 1.12
FDPS-208ENST00000470171 SBNO1A3KN83 1393 aa22.05■■□□□ 1.12
FDPS-208ENST00000470171 FMN2Q9NZ56 1722 aa22.05■■□□□ 1.12
FDPS-208ENST00000470171 PXDNQ92626 1479 aa22.04■■□□□ 1.12
FDPS-208ENST00000470171 NUTM2BA6NNL0 878 aaPredicted RBP22.04■■□□□ 1.12
FDPS-208ENST00000470171 NUTM2EB1AL46 878 aaPredicted RBP22.04■■□□□ 1.12
FDPS-208ENST00000470171 NUTM2AQ8IVF1 878 aaPredicted RBP22.04■■□□□ 1.12
FDPS-208ENST00000470171 HIRIP3Q9BW71 556 aaPredicted RBP22.04■■□□□ 1.12
FDPS-208ENST00000470171 KIF1AQ12756 1690 aa22.04■■□□□ 1.12
FDPS-208ENST00000470171 ROCK2O75116 1388 aaKnown RBP22.03■■□□□ 1.12
FDPS-208ENST00000470171 GPRASP1Q5JY77 1395 aa22.03■■□□□ 1.12
FDPS-208ENST00000470171 SPATA31A3Q5VYP0 1347 aa22.03■■□□□ 1.12
FDPS-208ENST00000470171 TULP4Q9NRJ4 1543 aa22.02■■□□□ 1.12
FDPS-208ENST00000470171 SLC24A1O60721 1099 aa22.02■■□□□ 1.12
FDPS-208ENST00000470171 CCDC61Q9Y6R9 512 aa22.02■■□□□ 1.12
FDPS-208ENST00000470171 ARHGEF10O15013 1369 aa22.01■■□□□ 1.11
FDPS-208ENST00000470171 CDK19Q9BWU1 502 aa22.01■■□□□ 1.11
FDPS-208ENST00000470171 LRP6O75581 1613 aa22■■□□□ 1.11
FDPS-208ENST00000470171 NUDT16Q96DE0 195 aaKnown RBP22■■□□□ 1.11
FDPS-208ENST00000470171 NGDNQ8NEJ9 315 aaKnown RBP21.98■■□□□ 1.11
FDPS-208ENST00000470171 PLEKHG3A1L390 1219 aa21.97■■□□□ 1.11
FDPS-208ENST00000470171 POTEAQ6S8J7 498 aa21.96■■□□□ 1.11
FDPS-208ENST00000470171 PMFBP1Q8TBY8 1022 aa21.96■■□□□ 1.11
FDPS-208ENST00000470171 NGLY1Q96IV0 654 aa21.96■■□□□ 1.11
FDPS-208ENST00000470171 EVC2Q86UK5 1308 aa21.96■■□□□ 1.11
FDPS-208ENST00000470171 PRR36Q9H6K5 1346 aa21.96■■□□□ 1.11
FDPS-208ENST00000470171 TNS3Q68CZ2 1445 aa21.96■■□□□ 1.11
FDPS-208ENST00000470171 XPCQ01831 940 aaPredicted RBP21.95■■□□□ 1.1
FDPS-208ENST00000470171 C8orf37Q96NL8 207 aa21.95■■□□□ 1.1
FDPS-208ENST00000470171 FNBP4Q8N3X1 1017 aaPredicted RBP21.94■■□□□ 1.1
FDPS-208ENST00000470171 CARD11Q9BXL7 1154 aa21.94■■□□□ 1.1
FDPS-208ENST00000470171 AFF2P51816 1311 aa21.94■■□□□ 1.1
FDPS-208ENST00000470171 BRD4O60885 1362 aaPredicted RBP21.94■■□□□ 1.1
FDPS-208ENST00000470171 COL22A1Q8NFW1 1626 aaPredicted RBP21.94■■□□□ 1.1
FDPS-208ENST00000470171 SRPK2P78362 688 aaKnown RBP21.93■■□□□ 1.1
FDPS-208ENST00000470171 NBPF8Q3BBV2 869 aa21.93■■□□□ 1.1
FDPS-208ENST00000470171 ARHGEF28Q8N1W1 1705 aaKnown RBP21.93■■□□□ 1.1
FDPS-208ENST00000470171 SBNO2Q9Y2G9 1366 aa21.92■■□□□ 1.1
FDPS-208ENST00000470171 ADAMTS2O95450 1211 aa21.92■■□□□ 1.1
FDPS-208ENST00000470171 RXRBP28702 533 aa21.92■■□□□ 1.1
FDPS-208ENST00000470171 ATP7BP35670 1465 aa21.91■■□□□ 1.1
FDPS-208ENST00000470171 POLR3AO14802 1390 aaPredicted RBP21.91■■□□□ 1.1
FDPS-208ENST00000470171 PCGF6Q9BYE7 350 aa21.91■■□□□ 1.1
FDPS-208ENST00000470171 HAP1P54257 671 aaPredicted RBP21.9■■□□□ 1.1
FDPS-208ENST00000470171 TRPC5Q9UL62 973 aaPredicted RBP21.89■■□□□ 1.09
FDPS-208ENST00000470171 TRPM1Q7Z4N2 1603 aa21.88■■□□□ 1.09
FDPS-208ENST00000470171 RBM6P78332 1123 aaKnown RBP21.88■■□□□ 1.09
FDPS-208ENST00000470171 LMOD2Q6P5Q4 547 aa21.88■■□□□ 1.09
FDPS-208ENST00000470171 PUS7Q96PZ0 661 aaKnown RBP21.88■■□□□ 1.09
FDPS-208ENST00000470171 QTRT2Q9H974 415 aaKnown RBP21.88■■□□□ 1.09
FDPS-208ENST00000470171 USP21Q9UK80 565 aa21.88■■□□□ 1.09
FDPS-208ENST00000470171 RALGAPBQ86X10 1494 aa21.88■■□□□ 1.09
FDPS-208ENST00000470171 CDK12Q9NYV4 1490 aaPredicted RBP21.87■■□□□ 1.09
FDPS-208ENST00000470171 USP32Q8NFA0 1604 aa21.87■■□□□ 1.09
FDPS-208ENST00000470171 ZNF692Q9BU19 519 aaPredicted RBP21.86■■□□□ 1.09
FDPS-208ENST00000470171 ACEP12821 1306 aa21.85■■□□□ 1.09
FDPS-208ENST00000470171 ATAD2Q6PL18 1390 aa21.85■■□□□ 1.09
FDPS-208ENST00000470171 CABP2Q9NPB3 220 aa21.84■■□□□ 1.09
FDPS-208ENST00000470171 PAK3O75914 559 aaPredicted RBP21.83■■□□□ 1.09
FDPS-208ENST00000470171 PPIP5K1Q6PFW1 1433 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms