RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 KDM2AQ9Y2K7 1162 aa26.69■■□□□ 1.86
PHGDH-204ENST00000469443 PLEKHH1Q9ULM0 1364 aa26.69■■□□□ 1.86
PHGDH-204ENST00000469443 SIRT1Q96EB6 747 aa26.68■■□□□ 1.86
PHGDH-204ENST00000469443 SOCS7O14512 581 aa26.67■■□□□ 1.86
PHGDH-204ENST00000469443 FMN2Q9NZ56 1722 aa26.67■■□□□ 1.86
PHGDH-204ENST00000469443 ADGRB1O14514 1584 aa26.67■■□□□ 1.86
PHGDH-204ENST00000469443 SPATA31A6Q5VVP1 1343 aa26.66■■□□□ 1.86
PHGDH-204ENST00000469443 ORAI2Q96SN7 254 aa26.65■■□□□ 1.86
PHGDH-204ENST00000469443 DLC1Q96QB1 1528 aa26.65■■□□□ 1.86
PHGDH-204ENST00000469443 RGS17Q9UGC6 210 aaPredicted RBP26.64■■□□□ 1.86
PHGDH-204ENST00000469443 DDX17Q92841 729 aaKnown RBP26.63■■□□□ 1.85
PHGDH-204ENST00000469443 LRP6O75581 1613 aa26.62■■□□□ 1.85
PHGDH-204ENST00000469443 LRRC59Q96AG4 307 aaKnown RBP26.62■■□□□ 1.85
PHGDH-204ENST00000469443 RGPD8O14715 1765 aaPredicted RBP26.61■■□□□ 1.85
PHGDH-204ENST00000469443 KIAA1210Q9ULL0 1709 aa26.58■■□□□ 1.85
PHGDH-204ENST00000469443 ESCO1Q5FWF5 840 aa26.57■■□□□ 1.84
PHGDH-204ENST00000469443 PRAM1Q96QH2 718 aa26.57■■□□□ 1.84
PHGDH-204ENST00000469443 SOS2Q07890 1332 aaPredicted RBP26.56■■□□□ 1.84
PHGDH-204ENST00000469443 KIF1AQ12756 1690 aa26.56■■□□□ 1.84
PHGDH-204ENST00000469443 PNPLA6Q8IY17 1366 aa26.55■■□□□ 1.84
PHGDH-204ENST00000469443 ARHGEF28Q8N1W1 1705 aaKnown RBP26.54■■□□□ 1.84
PHGDH-204ENST00000469443 NUTM2FA1L443 756 aa26.54■■□□□ 1.84
PHGDH-204ENST00000469443 POGKQ9P215 609 aa26.54■■□□□ 1.84
PHGDH-204ENST00000469443 TRAK1Q9UPV9 953 aa26.54■■□□□ 1.84
PHGDH-204ENST00000469443 ADGRB2O60241 1585 aa26.54■■□□□ 1.84
PHGDH-204ENST00000469443 SAFB2Q14151 953 aaKnown RBP eCLIP26.53■■□□□ 1.84
PHGDH-204ENST00000469443 MEX3CQ5U5Q3 659 aaKnown RBP26.53■■□□□ 1.84
PHGDH-204ENST00000469443 NPHP3Q7Z494 1330 aa26.52■■□□□ 1.84
PHGDH-204ENST00000469443 NUTM2BA6NNL0 878 aaPredicted RBP26.51■■□□□ 1.83
PHGDH-204ENST00000469443 NUTM2EB1AL46 878 aaPredicted RBP26.51■■□□□ 1.83
PHGDH-204ENST00000469443 POTEAQ6S8J7 498 aa26.51■■□□□ 1.83
PHGDH-204ENST00000469443 NUTM2AQ8IVF1 878 aaPredicted RBP26.51■■□□□ 1.83
PHGDH-204ENST00000469443 PXDNQ92626 1479 aa26.5■■□□□ 1.83
PHGDH-204ENST00000469443 COL22A1Q8NFW1 1626 aaPredicted RBP26.49■■□□□ 1.83
PHGDH-204ENST00000469443 USP32Q8NFA0 1604 aa26.47■■□□□ 1.83
PHGDH-204ENST00000469443 FOXO3O43524 673 aa26.47■■□□□ 1.83
PHGDH-204ENST00000469443 TRIM26Q12899 539 aaPredicted RBP26.44■■□□□ 1.82
PHGDH-204ENST00000469443 ANKARQ7Z5J8 1434 aa26.43■■□□□ 1.82
PHGDH-204ENST00000469443 SIN3AQ96ST3 1273 aa26.43■■□□□ 1.82
PHGDH-204ENST00000469443 MINK1Q8N4C8 1332 aaPredicted RBP26.42■■□□□ 1.82
PHGDH-204ENST00000469443 XPCQ01831 940 aaPredicted RBP26.42■■□□□ 1.82
PHGDH-204ENST00000469443 ZNF772Q68DY9 489 aaPredicted RBP26.42■■□□□ 1.82
PHGDH-204ENST00000469443 HIRIP3Q9BW71 556 aaPredicted RBP26.41■■□□□ 1.82
PHGDH-204ENST00000469443 PHF8Q9UPP1 1060 aa26.41■■□□□ 1.82
PHGDH-204ENST00000469443 L3MBTL2Q969R5 705 aa26.4■■□□□ 1.82
PHGDH-204ENST00000469443 MARF1Q9Y4F3 1742 aaKnown RBP26.39■■□□□ 1.82
PHGDH-204ENST00000469443 EIF3AQ14152 1382 aaKnown RBP26.39■■□□□ 1.82
PHGDH-204ENST00000469443 TULP4Q9NRJ4 1543 aa26.39■■□□□ 1.81
PHGDH-204ENST00000469443 AFF2P51816 1311 aa26.38■■□□□ 1.81
PHGDH-204ENST00000469443 ITSN1Q15811 1721 aa26.37■■□□□ 1.81
PHGDH-204ENST00000469443 NEUROD1Q13562 356 aa26.37■■□□□ 1.81
PHGDH-204ENST00000469443 NBPF1Q3BBV0 1214 aa26.37■■□□□ 1.81
PHGDH-204ENST00000469443 WASLO00401 505 aaPredicted RBP26.36■■□□□ 1.81
PHGDH-204ENST00000469443 KRT28Q7Z3Y7 464 aa26.36■■□□□ 1.81
PHGDH-204ENST00000469443 TRPM1Q7Z4N2 1603 aa26.36■■□□□ 1.81
PHGDH-204ENST00000469443 C8orf37Q96NL8 207 aa26.35■■□□□ 1.81
PHGDH-204ENST00000469443 ADAMTS2O95450 1211 aa26.34■■□□□ 1.81
PHGDH-204ENST00000469443 SPATA31A3Q5VYP0 1347 aa26.34■■□□□ 1.81
PHGDH-204ENST00000469443 PSME1Q06323 249 aa26.32■■□□□ 1.8
PHGDH-204ENST00000469443 PRR36Q9H6K5 1346 aa26.32■■□□□ 1.8
PHGDH-204ENST00000469443 PMFBP1Q8TBY8 1022 aa26.31■■□□□ 1.8
PHGDH-204ENST00000469443 TNS3Q68CZ2 1445 aa26.31■■□□□ 1.8
PHGDH-204ENST00000469443 TRPM3Q9HCF6 1732 aaPredicted RBP26.3■■□□□ 1.8
PHGDH-204ENST00000469443 NGLY1Q96IV0 654 aa26.29■■□□□ 1.8
PHGDH-204ENST00000469443 SBNO1A3KN83 1393 aa26.29■■□□□ 1.8
PHGDH-204ENST00000469443 QRICH2Q9H0J4 1663 aa26.28■■□□□ 1.8
PHGDH-204ENST00000469443 ATP7BP35670 1465 aa26.28■■□□□ 1.8
PHGDH-204ENST00000469443 ABCA3Q99758 1704 aa26.26■■□□□ 1.79
PHGDH-204ENST00000469443 TOPAZ1Q8N9V7 1692 aa26.26■■□□□ 1.79
PHGDH-204ENST00000469443 RXRBP28702 533 aa26.25■■□□□ 1.79
PHGDH-204ENST00000469443 ALS2Q96Q42 1657 aa26.25■■□□□ 1.79
PHGDH-204ENST00000469443 CENPJQ9HC77 1338 aaPredicted RBP26.24■■□□□ 1.79
PHGDH-204ENST00000469443 NUDT16Q96DE0 195 aaKnown RBP26.24■■□□□ 1.79
PHGDH-204ENST00000469443 CDK19Q9BWU1 502 aa26.23■■□□□ 1.79
PHGDH-204ENST00000469443 QTRT2Q9H974 415 aaKnown RBP26.23■■□□□ 1.79
PHGDH-204ENST00000469443 CDK12Q9NYV4 1490 aaPredicted RBP26.23■■□□□ 1.79
PHGDH-204ENST00000469443 ARHGEF10O15013 1369 aa26.22■■□□□ 1.79
PHGDH-204ENST00000469443 GPRASP1Q5JY77 1395 aa26.22■■□□□ 1.79
PHGDH-204ENST00000469443 FNBP4Q8N3X1 1017 aaPredicted RBP26.22■■□□□ 1.79
PHGDH-204ENST00000469443 USP21Q9UK80 565 aa26.21■■□□□ 1.79
PHGDH-204ENST00000469443 NGDNQ8NEJ9 315 aaKnown RBP26.2■■□□□ 1.78
PHGDH-204ENST00000469443 ROCK2O75116 1388 aaKnown RBP26.2■■□□□ 1.78
PHGDH-204ENST00000469443 LMOD2Q6P5Q4 547 aa26.19■■□□□ 1.78
PHGDH-204ENST00000469443 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.19■■□□□ 1.78
PHGDH-204ENST00000469443 RBM6P78332 1123 aaKnown RBP26.18■■□□□ 1.78
PHGDH-204ENST00000469443 TONSLQ96HA7 1378 aa26.18■■□□□ 1.78
PHGDH-204ENST00000469443 NBPF8Q3BBV2 869 aa26.16■■□□□ 1.78
PHGDH-204ENST00000469443 HAP1P54257 671 aaPredicted RBP26.15■■□□□ 1.78
PHGDH-204ENST00000469443 CABLES1Q8TDN4 633 aa26.15■■□□□ 1.78
PHGDH-204ENST00000469443 TRPC5Q9UL62 973 aaPredicted RBP26.15■■□□□ 1.78
PHGDH-204ENST00000469443 CCDC61Q9Y6R9 512 aa26.15■■□□□ 1.78
PHGDH-204ENST00000469443 ATRNO75882 1429 aa26.14■■□□□ 1.78
PHGDH-204ENST00000469443 CRYBG1Q9Y4K1 1723 aa26.14■■□□□ 1.78
PHGDH-204ENST00000469443 BCL9LQ86UU0 1499 aa26.14■■□□□ 1.78
PHGDH-204ENST00000469443 PLCH1Q4KWH8 1693 aa26.14■■□□□ 1.78
PHGDH-204ENST00000469443 NWD2Q9ULI1 1742 aa26.13■■□□□ 1.77
PHGDH-204ENST00000469443 POLR3AO14802 1390 aaPredicted RBP26.12■■□□□ 1.77
PHGDH-204ENST00000469443 PLEKHG5O94827 1062 aa26.12■■□□□ 1.77
PHGDH-204ENST00000469443 SRPK2P78362 688 aaKnown RBP26.12■■□□□ 1.77
PHGDH-204ENST00000469443 SLIT2O94813 1529 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms