RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 TCP11L2Q8N4U5 519 aa18.59■□□□□ 0.57
LIMS2-213ENST00000469300 CCDC61Q9Y6R9 512 aa18.59■□□□□ 0.57
LIMS2-213ENST00000469300 CRBNQ96SW2 442 aa18.58■□□□□ 0.56
LIMS2-213ENST00000469300 ADAMTS8Q9UP79 889 aa18.58■□□□□ 0.56
LIMS2-213ENST00000469300 CSPP1Q1MSJ5 1256 aa18.57■□□□□ 0.56
LIMS2-213ENST00000469300 SYAP1Q96A49 352 aaPredicted RBP18.57■□□□□ 0.56
LIMS2-213ENST00000469300 HSP90B1P14625 803 aaKnown RBP18.57■□□□□ 0.56
LIMS2-213ENST00000469300 THOC2Q8NI27 1593 aaKnown RBP18.57■□□□□ 0.56
LIMS2-213ENST00000469300 TATP17735 454 aaPredicted RBP18.57■□□□□ 0.56
LIMS2-213ENST00000469300 MSH5O43196 834 aa18.56■□□□□ 0.56
LIMS2-213ENST00000469300 TULP1O00294 542 aaPredicted RBP18.56■□□□□ 0.56
LIMS2-213ENST00000469300 G3BP1Q13283 466 aaKnown RBP eCLIP18.56■□□□□ 0.56
LIMS2-213ENST00000469300 EXOC6Q8TAG9 804 aa18.56■□□□□ 0.56
LIMS2-213ENST00000469300 PRKAR2BP31323 418 aa18.56■□□□□ 0.56
LIMS2-213ENST00000469300 DHX29Q7Z478 1369 aaKnown RBP18.55■□□□□ 0.56
LIMS2-213ENST00000469300 PNISRQ8TF01 805 aaKnown RBP18.55■□□□□ 0.56
LIMS2-213ENST00000469300 FAM161AQ3B820 660 aa18.55■□□□□ 0.56
LIMS2-213ENST00000469300 IFIT2P09913 472 aaKnown RBP18.54■□□□□ 0.56
LIMS2-213ENST00000469300 DIAPH3Q9NSV4 1193 aa18.54■□□□□ 0.56
LIMS2-213ENST00000469300 CCDC30Q5VVM6 783 aa18.54■□□□□ 0.56
LIMS2-213ENST00000469300 RILPL2Q969X0 211 aa18.54■□□□□ 0.56
LIMS2-213ENST00000469300 TOMM22Q9NS69 142 aa18.54■□□□□ 0.56
LIMS2-213ENST00000469300 REC8O95072 547 aa18.53■□□□□ 0.56
LIMS2-213ENST00000469300 MSNP26038 577 aaKnown RBP18.53■□□□□ 0.56
LIMS2-213ENST00000469300 RIC3Q7Z5B4 369 aa18.53■□□□□ 0.56
LIMS2-213ENST00000469300 NOL10Q9BSC4 688 aaKnown RBP18.53■□□□□ 0.56
LIMS2-213ENST00000469300 RSPH6AQ9H0K4 717 aa18.53■□□□□ 0.56
LIMS2-213ENST00000469300 NECTIN2Q92692 538 aa18.52■□□□□ 0.56
LIMS2-213ENST00000469300 TEX14Q8IWB6 1497 aa18.51■□□□□ 0.55
LIMS2-213ENST00000469300 GNAI3P08754 354 aa18.51■□□□□ 0.55
LIMS2-213ENST00000469300 CT47B1P0C2W7 299 aaPredicted RBP18.51■□□□□ 0.55
LIMS2-213ENST00000469300 AMOTL1Q8IY63 956 aa18.51■□□□□ 0.55
LIMS2-213ENST00000469300 WWC1Q8IX03 1113 aa18.51■□□□□ 0.55
LIMS2-213ENST00000469300 KCNH5Q8NCM2 988 aa18.5■□□□□ 0.55
LIMS2-213ENST00000469300 NUDT16Q96DE0 195 aaKnown RBP18.5■□□□□ 0.55
LIMS2-213ENST00000469300 PLCH2O75038 1416 aa18.49■□□□□ 0.55
LIMS2-213ENST00000469300 HMGB2P26583 209 aaKnown RBP18.49■□□□□ 0.55
LIMS2-213ENST00000469300 CPLX2Q6PUV4 134 aaKnown RBP18.49■□□□□ 0.55
LIMS2-213ENST00000469300 SLKQ9H2G2 1235 aaPredicted RBP18.49■□□□□ 0.55
LIMS2-213ENST00000469300 SPG7Q9UQ90 795 aa18.49■□□□□ 0.55
LIMS2-213ENST00000469300 ZKSCAN1P17029 563 aaPredicted RBP18.48■□□□□ 0.55
LIMS2-213ENST00000469300 GPATCH8Q9UKJ3 1502 aaKnown RBP18.48■□□□□ 0.55
LIMS2-213ENST00000469300 ERC2O15083 957 aa18.48■□□□□ 0.55
LIMS2-213ENST00000469300 VSIG10Q8N0Z9 540 aa18.48■□□□□ 0.55
LIMS2-213ENST00000469300 UBTFL1P0CB47 393 aaPredicted RBP18.48■□□□□ 0.55
LIMS2-213ENST00000469300 HSP90AA2PQ14568 343 aaPredicted RBP18.48■□□□□ 0.55
LIMS2-213ENST00000469300 SULT6B1Q6IMI4 303 aa18.48■□□□□ 0.55
LIMS2-213ENST00000469300 IPO9Q96P70 1041 aaKnown RBP18.48■□□□□ 0.55
LIMS2-213ENST00000469300 IDI1Q13907 227 aa18.47■□□□□ 0.55
LIMS2-213ENST00000469300 PRDM11Q9NQV5 511 aa18.47■□□□□ 0.55
LIMS2-213ENST00000469300 CCDC184Q52MB2 194 aa18.47■□□□□ 0.55
LIMS2-213ENST00000469300 ATP10BO94823 1461 aa18.47■□□□□ 0.55
LIMS2-213ENST00000469300 CHAF1AQ13111 956 aaPredicted RBP18.47■□□□□ 0.55
LIMS2-213ENST00000469300 VPS37DQ86XT2 251 aa18.47■□□□□ 0.55
LIMS2-213ENST00000469300 WDR63Q8IWG1 891 aa18.47■□□□□ 0.55
LIMS2-213ENST00000469300 RAPGEF6Q8TEU7 1601 aa18.46■□□□□ 0.55
LIMS2-213ENST00000469300 SYNE3Q6ZMZ3 975 aa18.46■□□□□ 0.55
LIMS2-213ENST00000469300 AMER1Q5JTC6 1135 aaPredicted RBP18.46■□□□□ 0.54
LIMS2-213ENST00000469300 FCHSD2O94868 740 aa18.45■□□□□ 0.54
LIMS2-213ENST00000469300 RNF20Q5VTR2 975 aa18.45■□□□□ 0.54
LIMS2-213ENST00000469300 TOM1L2Q6ZVM7 507 aa18.45■□□□□ 0.54
LIMS2-213ENST00000469300 ATP6V1DQ9Y5K8 247 aa18.45■□□□□ 0.54
LIMS2-213ENST00000469300 ASXL2Q76L83 1435 aa18.45■□□□□ 0.54
LIMS2-213ENST00000469300 SLC4A3P48751 1232 aa18.44■□□□□ 0.54
LIMS2-213ENST00000469300 STRN4Q9NRL3 753 aa18.44■□□□□ 0.54
LIMS2-213ENST00000469300 ZNF530Q6P9A1 599 aaPredicted RBP18.44■□□□□ 0.54
LIMS2-213ENST00000469300 PDE4AP27815 886 aa18.44■□□□□ 0.54
LIMS2-213ENST00000469300 UGGT2Q9NYU1 1516 aa18.44■□□□□ 0.54
LIMS2-213ENST00000469300 TPM4P67936 248 aa18.43■□□□□ 0.54
LIMS2-213ENST00000469300 TWISTNBQ3B726 338 aaPredicted RBP18.43■□□□□ 0.54
LIMS2-213ENST00000469300 ZNF428Q96B54 188 aa18.43■□□□□ 0.54
LIMS2-213ENST00000469300 AKAP17AQ02040 695 aaKnown RBP18.43■□□□□ 0.54
LIMS2-213ENST00000469300 AIMP1Q12904 312 aaKnown RBP18.43■□□□□ 0.54
LIMS2-213ENST00000469300 DMRT2Q9Y5R5 561 aa18.43■□□□□ 0.54
LIMS2-213ENST00000469300 PDE3AQ14432 1141 aa18.42■□□□□ 0.54
LIMS2-213ENST00000469300 USP35Q9P2H5 1018 aa18.42■□□□□ 0.54
LIMS2-213ENST00000469300 DRC7Q8IY82 874 aa18.42■□□□□ 0.54
LIMS2-213ENST00000469300 FAM135AQ9P2D6 1515 aa18.42■□□□□ 0.54
LIMS2-213ENST00000469300 KIF6Q6ZMV9 814 aa18.41■□□□□ 0.54
LIMS2-213ENST00000469300 EXOSC9Q06265 439 aaKnown RBP18.4■□□□□ 0.54
LIMS2-213ENST00000469300 RBM33Q96EV2 1170 aaKnown RBP18.4■□□□□ 0.54
LIMS2-213ENST00000469300 TRDNQ13061 729 aa18.4■□□□□ 0.54
LIMS2-213ENST00000469300 CABP4P57796 275 aa18.4■□□□□ 0.54
LIMS2-213ENST00000469300 FBXO31Q5XUX0 539 aaPredicted RBP18.4■□□□□ 0.54
LIMS2-213ENST00000469300 FAM184AQ8NB25 1140 aa18.4■□□□□ 0.54
LIMS2-213ENST00000469300 NSD3Q9BZ95 1437 aa18.4■□□□□ 0.54
LIMS2-213ENST00000469300 WDR7Q9Y4E6 1490 aa18.39■□□□□ 0.54
LIMS2-213ENST00000469300 HDGFL1Q5TGJ6 251 aa18.39■□□□□ 0.54
LIMS2-213ENST00000469300 INTS3Q68E01 1043 aaKnown RBP18.39■□□□□ 0.54
LIMS2-213ENST00000469300 AMOTL2Q9Y2J4 779 aa18.39■□□□□ 0.53
LIMS2-213ENST00000469300 KDM5BQ9UGL1 1544 aa18.39■□□□□ 0.53
LIMS2-213ENST00000469300 NINLQ9Y2I6 1382 aa18.39■□□□□ 0.53
LIMS2-213ENST00000469300 SF3A1Q15459 793 aaKnown RBP18.39■□□□□ 0.53
LIMS2-213ENST00000469300 ADAMTS12P58397 1594 aa18.39■□□□□ 0.53
LIMS2-213ENST00000469300 NUP153P49790 1475 aaKnown RBP18.39■□□□□ 0.53
LIMS2-213ENST00000469300 CLASRPQ8N2M8 674 aaKnown RBP18.38■□□□□ 0.53
LIMS2-213ENST00000469300 RASSF8Q8NHQ8 419 aa18.38■□□□□ 0.53
LIMS2-213ENST00000469300 TRIM34Q9BYJ4 488 aa18.38■□□□□ 0.53
LIMS2-213ENST00000469300 ZNF518AQ6AHZ1 1483 aa18.38■□□□□ 0.53
LIMS2-213ENST00000469300 PHF14O94880 888 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms