RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 CYP4X1Q8N118 509 aa10.12□□□□□ -0.79
SCFD1-205ENST00000469043 KRI1Q8N9T8 703 aaKnown RBP10.11□□□□□ -0.79
SCFD1-205ENST00000469043 ZNF775Q96BV0 537 aaPredicted RBP10.1□□□□□ -0.79
SCFD1-205ENST00000469043 USB1Q9BQ65 265 aaKnown RBP10.1□□□□□ -0.79
SCFD1-205ENST00000469043 CLCN1P35523 988 aa10.09□□□□□ -0.79
SCFD1-205ENST00000469043 AAASQ9NRG9 546 aa10.09□□□□□ -0.79
SCFD1-205ENST00000469043 MMP16P51512 607 aa10.08□□□□□ -0.8
SCFD1-205ENST00000469043 CCDC102AQ96A19 550 aa10.08□□□□□ -0.8
SCFD1-205ENST00000469043 GPCPD1Q9NPB8 672 aa10.08□□□□□ -0.8
SCFD1-205ENST00000469043 TOR4AQ9NXH8 423 aa10.08□□□□□ -0.8
SCFD1-205ENST00000469043 TTC24A2A3L6 582 aaPredicted RBP10.06□□□□□ -0.8
SCFD1-205ENST00000469043 ST8SIA5O15466 376 aa10.06□□□□□ -0.8
SCFD1-205ENST00000469043 POTECB2RU33 542 aa10.05□□□□□ -0.8
SCFD1-205ENST00000469043 CRIPAKQ8N1N5 446 aa10.05□□□□□ -0.8
SCFD1-205ENST00000469043 HOXA2O43364 376 aa10.04□□□□□ -0.8
SCFD1-205ENST00000469043 DXOO77932 396 aaKnown RBP10.04□□□□□ -0.8
SCFD1-205ENST00000469043 AVPP01185 164 aa10.04□□□□□ -0.8
SCFD1-205ENST00000469043 TRIM32Q13049 653 aa10.04□□□□□ -0.8
SCFD1-205ENST00000469043 NUTM1Q86Y26 1132 aa10.04□□□□□ -0.8
SCFD1-205ENST00000469043 CCDC24Q8N4L8 307 aa10.04□□□□□ -0.8
SCFD1-205ENST00000469043 WNT7AO00755 349 aa10.03□□□□□ -0.8
SCFD1-205ENST00000469043 AXIN1O15169 862 aa10.03□□□□□ -0.8
SCFD1-205ENST00000469043 CTC1Q2NKJ3 1217 aa10.03□□□□□ -0.8
SCFD1-205ENST00000469043 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.03□□□□□ -0.8
SCFD1-205ENST00000469043 FAM217BQ9NTX9 383 aaPredicted RBP10.03□□□□□ -0.8
SCFD1-205ENST00000469043 SNIP1Q8TAD8 396 aaKnown RBP10.02□□□□□ -0.81
SCFD1-205ENST00000469043 HLA-CQ95604 372 aa10.01□□□□□ -0.81
SCFD1-205ENST00000469043 SMCPP49901 116 aaPredicted RBP9.99□□□□□ -0.81
SCFD1-205ENST00000469043 REPIN1Q9BWE0 567 aaKnown RBP9.99□□□□□ -0.81
SCFD1-205ENST00000469043 MRGPRX2Q96LB1 330 aa9.98□□□□□ -0.81
SCFD1-205ENST00000469043 JUNDP17535 347 aa9.97□□□□□ -0.81
SCFD1-205ENST00000469043 GUCA2AQ02747 115 aa9.97□□□□□ -0.81
SCFD1-205ENST00000469043 SSTR3P32745 418 aaPredicted RBP9.96□□□□□ -0.82
SCFD1-205ENST00000469043 RETREG3Q86VR2 466 aa9.96□□□□□ -0.82
SCFD1-205ENST00000469043 DACH1Q9UI36 760 aa9.96□□□□□ -0.82
SCFD1-205ENST00000469043 C11orf95C9JLR9 678 aaPredicted RBP9.95□□□□□ -0.82
SCFD1-205ENST00000469043 FDX1P10109 184 aa9.95□□□□□ -0.82
SCFD1-205ENST00000469043 SMPD1P17405 629 aa9.95□□□□□ -0.82
SCFD1-205ENST00000469043 WNT7BP56706 349 aa9.95□□□□□ -0.82
SCFD1-205ENST00000469043 RC3H1Q5TC82 1133 aaKnown RBP9.95□□□□□ -0.82
SCFD1-205ENST00000469043 SYMPKQ92797 1274 aaKnown RBP9.95□□□□□ -0.82
SCFD1-205ENST00000469043 C6orf229H3BNL8 230 aa9.93□□□□□ -0.82
SCFD1-205ENST00000469043 BARGINQ6ZT62 677 aa9.93□□□□□ -0.82
SCFD1-205ENST00000469043 NUDT12Q9BQG2 462 aa9.93□□□□□ -0.82
SCFD1-205ENST00000469043 GMPR2Q9P2T1 348 aaKnown RBP9.93□□□□□ -0.82
SCFD1-205ENST00000469043 J3QL48 77 aa9.92□□□□□ -0.82
SCFD1-205ENST00000469043 TTLL12Q14166 644 aaPredicted RBP9.92□□□□□ -0.82
SCFD1-205ENST00000469043 TREML4Q6UXN2 200 aa9.92□□□□□ -0.82
SCFD1-205ENST00000469043 ZMYND10O75800 440 aa9.9□□□□□ -0.82
SCFD1-205ENST00000469043 SPIRE2Q8WWL2 714 aa9.9□□□□□ -0.82
SCFD1-205ENST00000469043 PCDHGC3Q9UN70 934 aa9.9□□□□□ -0.82
SCFD1-205ENST00000469043 SKOR1P84550 965 aa9.89□□□□□ -0.83
SCFD1-205ENST00000469043 MS4A1P11836 297 aa9.88□□□□□ -0.83
SCFD1-205ENST00000469043 SENP2Q9HC62 589 aa9.88□□□□□ -0.83
SCFD1-205ENST00000469043 ATP13A2Q9NQ11 1180 aa9.88□□□□□ -0.83
SCFD1-205ENST00000469043 ALDH1A1P00352 501 aa9.87□□□□□ -0.83
SCFD1-205ENST00000469043 AMHR2Q16671 573 aa9.87□□□□□ -0.83
SCFD1-205ENST00000469043 PTCRAQ6ISU1 281 aaPredicted RBP9.87□□□□□ -0.83
SCFD1-205ENST00000469043 ZC3H15Q8WU90 426 aaKnown RBP9.87□□□□□ -0.83
SCFD1-205ENST00000469043 HPS1Q92902 700 aa9.87□□□□□ -0.83
SCFD1-205ENST00000469043 SPDYE5A6NIY4 337 aa9.86□□□□□ -0.83
SCFD1-205ENST00000469043 CCNYL3P0C7X3 344 aa9.86□□□□□ -0.83
SCFD1-205ENST00000469043 NDUFV2P19404 249 aa9.86□□□□□ -0.83
SCFD1-205ENST00000469043 EHBP1Q8NDI1 1231 aa9.86□□□□□ -0.83
SCFD1-205ENST00000469043 MOXD2PA6NHM9 499 aa9.85□□□□□ -0.83
SCFD1-205ENST00000469043 DIXDC1Q155Q3 683 aa9.85□□□□□ -0.83
SCFD1-205ENST00000469043 GIGYF2Q6Y7W6 1299 aaKnown RBP9.85□□□□□ -0.83
SCFD1-205ENST00000469043 MTMR2Q13614 643 aa9.84□□□□□ -0.83
SCFD1-205ENST00000469043 PTPRNQ16849 979 aa9.84□□□□□ -0.83
SCFD1-205ENST00000469043 BEGAINQ9BUH8 593 aa9.84□□□□□ -0.83
SCFD1-205ENST00000469043 EVA1BQ9NVM1 165 aa9.84□□□□□ -0.83
SCFD1-205ENST00000469043 WFS1O76024 890 aa9.83□□□□□ -0.84
SCFD1-205ENST00000469043 PRR7Q8TB68 274 aa9.83□□□□□ -0.84
SCFD1-205ENST00000469043 KIFC2Q96AC6 838 aa9.83□□□□□ -0.84
SCFD1-205ENST00000469043 WASF2Q9Y6W5 498 aa9.83□□□□□ -0.84
SCFD1-205ENST00000469043 SIAH2O43255 324 aa9.82□□□□□ -0.84
SCFD1-205ENST00000469043 GJA5P36382 358 aa9.81□□□□□ -0.84
SCFD1-205ENST00000469043 KCNH2Q12809 1159 aa9.81□□□□□ -0.84
SCFD1-205ENST00000469043 LCE2AQ5TA79 106 aaPredicted RBP9.81□□□□□ -0.84
SCFD1-205ENST00000469043 DESI1Q6ICB0 168 aa9.81□□□□□ -0.84
SCFD1-205ENST00000469043 TRIM47Q96LD4 638 aa9.81□□□□□ -0.84
SCFD1-205ENST00000469043 UNC93B1Q9H1C4 597 aa9.81□□□□□ -0.84
SCFD1-205ENST00000469043 SNRPBP14678 240 aaKnown RBP9.8□□□□□ -0.84
SCFD1-205ENST00000469043 SH3BP2P78314 561 aa9.8□□□□□ -0.84
SCFD1-205ENST00000469043 BAP1Q92560 729 aa9.79□□□□□ -0.84
SCFD1-205ENST00000469043 TBC1D2Q9BYX2 928 aa9.79□□□□□ -0.84
SCFD1-205ENST00000469043 AK7Q96M32 723 aa9.78□□□□□ -0.84
SCFD1-205ENST00000469043 PLEKHG3A1L390 1219 aa9.76□□□□□ -0.85
SCFD1-205ENST00000469043 TRIM66O15016 1216 aa9.76□□□□□ -0.85
SCFD1-205ENST00000469043 CAPN5O15484 640 aaPredicted RBP9.76□□□□□ -0.85
SCFD1-205ENST00000469043 VARSP26640 1264 aaKnown RBP9.76□□□□□ -0.85
SCFD1-205ENST00000469043 CTHP32929 405 aa9.76□□□□□ -0.85
SCFD1-205ENST00000469043 NFX1Q12986 1120 aaKnown RBP9.76□□□□□ -0.85
SCFD1-205ENST00000469043 LINC01559Q495D7 138 aa9.76□□□□□ -0.85
SCFD1-205ENST00000469043 RSBN1LQ6PCB5 846 aaPredicted RBP9.76□□□□□ -0.85
SCFD1-205ENST00000469043 PARP9Q8IXQ6 854 aa9.75□□□□□ -0.85
SCFD1-205ENST00000469043 ZNF511Q8NB15 262 aa9.75□□□□□ -0.85
SCFD1-205ENST00000469043 TERTO14746 1132 aaKnown RBP9.74□□□□□ -0.85
SCFD1-205ENST00000469043 SPTLC1O15269 473 aa9.74□□□□□ -0.85
SCFD1-205ENST00000469043 LYPD8Q6UX82 237 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms