RNA–Protein interactions for RNA: ENST00000468965.2

SCAP-210, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-210ENST00000468965 EIF3AQ14152 1382 aaKnown RBP18.54■□□□□ 0.56
SCAP-210ENST00000468965 CENPJQ9HC77 1338 aaPredicted RBP18.53■□□□□ 0.56
SCAP-210ENST00000468965 CDC42BPGQ6DT37 1551 aa18.51■□□□□ 0.55
SCAP-210ENST00000468965 FMN2Q9NZ56 1722 aa18.5■□□□□ 0.55
SCAP-210ENST00000468965 ST20-MTHFSA0A0A6YYL1 179 aa18.5■□□□□ 0.55
SCAP-210ENST00000468965 IQSEC2Q5JU85 1478 aa18.5■□□□□ 0.55
SCAP-210ENST00000468965 MINK1Q8N4C8 1332 aaPredicted RBP18.49■□□□□ 0.55
SCAP-210ENST00000468965 HSPA5P11021 654 aaKnown RBP18.49■□□□□ 0.55
SCAP-210ENST00000468965 CERKQ8TCT0 537 aa18.49■□□□□ 0.55
SCAP-210ENST00000468965 RGPD8O14715 1765 aaPredicted RBP18.48■□□□□ 0.55
SCAP-210ENST00000468965 SBNO2Q9Y2G9 1366 aa18.48■□□□□ 0.55
SCAP-210ENST00000468965 EIF4G2P78344 907 aaKnown RBP eCLIP18.48■□□□□ 0.55
SCAP-210ENST00000468965 C14orf37Q86TY3 774 aa18.48■□□□□ 0.55
SCAP-210ENST00000468965 TULP4Q9NRJ4 1543 aa18.48■□□□□ 0.55
SCAP-210ENST00000468965 MSH6P52701 1360 aa18.47■□□□□ 0.55
SCAP-210ENST00000468965 TESK2Q96S53 571 aa18.47■□□□□ 0.55
SCAP-210ENST00000468965 HIRIP3Q9BW71 556 aaPredicted RBP18.47■□□□□ 0.55
SCAP-210ENST00000468965 C19orf44Q9H6X5 657 aa18.47■□□□□ 0.55
SCAP-210ENST00000468965 DCCP43146 1447 aa18.47■□□□□ 0.55
SCAP-210ENST00000468965 USP32Q8NFA0 1604 aa18.45■□□□□ 0.54
SCAP-210ENST00000468965 MST1RQ04912 1400 aa18.41■□□□□ 0.54
SCAP-210ENST00000468965 WASLO00401 505 aaPredicted RBP18.41■□□□□ 0.54
SCAP-210ENST00000468965 ATF3P18847 181 aa18.4■□□□□ 0.54
SCAP-210ENST00000468965 CADPS2Q86UW7 1296 aa18.4■□□□□ 0.54
SCAP-210ENST00000468965 TOPAZ1Q8N9V7 1692 aa18.4■□□□□ 0.54
SCAP-210ENST00000468965 DISP3Q9P2K9 1392 aa18.4■□□□□ 0.54
SCAP-210ENST00000468965 CDK19Q9BWU1 502 aa18.39■□□□□ 0.53
SCAP-210ENST00000468965 EVC2Q86UK5 1308 aa18.39■□□□□ 0.53
SCAP-210ENST00000468965 ATP7BP35670 1465 aa18.39■□□□□ 0.53
SCAP-210ENST00000468965 ITSN1Q15811 1721 aa18.38■□□□□ 0.53
SCAP-210ENST00000468965 NUTM2FA1L443 756 aa18.38■□□□□ 0.53
SCAP-210ENST00000468965 PRR36Q9H6K5 1346 aa18.38■□□□□ 0.53
SCAP-210ENST00000468965 C1orf167Q5SNV9 1468 aa18.38■□□□□ 0.53
SCAP-210ENST00000468965 ANKARQ7Z5J8 1434 aa18.37■□□□□ 0.53
SCAP-210ENST00000468965 TMF1P82094 1093 aa18.35■□□□□ 0.53
SCAP-210ENST00000468965 CABP2Q9NPB3 220 aa18.35■□□□□ 0.53
SCAP-210ENST00000468965 SRPK2P78362 688 aaKnown RBP18.34■□□□□ 0.53
SCAP-210ENST00000468965 SLAIN2Q9P270 581 aa18.34■□□□□ 0.53
SCAP-210ENST00000468965 ROBO1Q9Y6N7 1651 aa18.34■□□□□ 0.53
SCAP-210ENST00000468965 C11orf95C9JLR9 678 aaPredicted RBP18.33■□□□□ 0.52
SCAP-210ENST00000468965 UBAP1LF5GYI3 381 aa18.33■□□□□ 0.52
SCAP-210ENST00000468965 SLC24A1O60721 1099 aa18.33■□□□□ 0.52
SCAP-210ENST00000468965 TOM1O60784 492 aa18.33■□□□□ 0.52
SCAP-210ENST00000468965 NUDT16Q96DE0 195 aaKnown RBP18.33■□□□□ 0.52
SCAP-210ENST00000468965 MYOM1P52179 1685 aa18.33■□□□□ 0.52
SCAP-210ENST00000468965 KIF1AQ12756 1690 aa18.31■□□□□ 0.52
SCAP-210ENST00000468965 ORAI2Q96SN7 254 aa18.31■□□□□ 0.52
SCAP-210ENST00000468965 ATAD2Q6PL18 1390 aa18.3■□□□□ 0.52
SCAP-210ENST00000468965 PUS7Q96PZ0 661 aaKnown RBP18.3■□□□□ 0.52
SCAP-210ENST00000468965 BRINP3Q76B58 766 aa18.29■□□□□ 0.52
SCAP-210ENST00000468965 NHSL1Q5SYE7 1610 aa18.29■□□□□ 0.52
SCAP-210ENST00000468965 AKAP12Q02952 1782 aa18.29■□□□□ 0.52
SCAP-210ENST00000468965 PPIP5K1Q6PFW1 1433 aa18.28■□□□□ 0.52
SCAP-210ENST00000468965 KIF7Q2M1P5 1343 aa18.27■□□□□ 0.52
SCAP-210ENST00000468965 PIP4K2BP78356 416 aa18.27■□□□□ 0.52
SCAP-210ENST00000468965 ESCO1Q5FWF5 840 aa18.27■□□□□ 0.52
SCAP-210ENST00000468965 CCDC61Q9Y6R9 512 aa18.27■□□□□ 0.52
SCAP-210ENST00000468965 CDCA8Q53HL2 280 aa18.26■□□□□ 0.51
SCAP-210ENST00000468965 PHF8Q9UPP1 1060 aa18.26■□□□□ 0.51
SCAP-210ENST00000468965 PMFBP1Q8TBY8 1022 aa18.25■□□□□ 0.51
SCAP-210ENST00000468965 CCDC7Q96M83 1385 aa18.25■□□□□ 0.51
SCAP-210ENST00000468965 WASHC2AQ641Q2 1341 aa18.24■□□□□ 0.51
SCAP-210ENST00000468965 AHDC1Q5TGY3 1603 aaPredicted RBP18.24■□□□□ 0.51
SCAP-210ENST00000468965 PLEKHG3A1L390 1219 aa18.24■□□□□ 0.51
SCAP-210ENST00000468965 CABP1Q9NZU7 370 aa18.24■□□□□ 0.51
SCAP-210ENST00000468965 CD163L1Q9NR16 1453 aa18.24■□□□□ 0.51
SCAP-210ENST00000468965 SCAF1Q9H7N4 1312 aaKnown RBP18.23■□□□□ 0.51
SCAP-210ENST00000468965 MON2Q7Z3U7 1717 aa18.23■□□□□ 0.51
SCAP-210ENST00000468965 POLR3AO14802 1390 aaPredicted RBP18.23■□□□□ 0.51
SCAP-210ENST00000468965 POLR3GLQ9BT43 218 aa18.23■□□□□ 0.51
SCAP-210ENST00000468965 SLC12A5Q9H2X9 1139 aa18.23■□□□□ 0.51
SCAP-210ENST00000468965 PHLPP1O60346 1717 aa18.23■□□□□ 0.51
SCAP-210ENST00000468965 DDX17Q92841 729 aaKnown RBP18.22■□□□□ 0.51
SCAP-210ENST00000468965 TRPM3Q9HCF6 1732 aaPredicted RBP18.22■□□□□ 0.51
SCAP-210ENST00000468965 NINLQ9Y2I6 1382 aa18.21■□□□□ 0.51
SCAP-210ENST00000468965 TMC1Q8TDI8 760 aa18.21■□□□□ 0.51
SCAP-210ENST00000468965 ACEP12821 1306 aa18.21■□□□□ 0.51
SCAP-210ENST00000468965 PXDNQ92626 1479 aa18.2■□□□□ 0.5
SCAP-210ENST00000468965 FOXO3O43524 673 aa18.2■□□□□ 0.5
SCAP-210ENST00000468965 CPSF1Q10570 1443 aaKnown RBP18.2■□□□□ 0.5
SCAP-210ENST00000468965 NRKQ7Z2Y5 1582 aa18.2■□□□□ 0.5
SCAP-210ENST00000468965 COL16A1Q07092 1604 aaPredicted RBP18.2■□□□□ 0.5
SCAP-210ENST00000468965 NGDNQ8NEJ9 315 aaKnown RBP18.18■□□□□ 0.5
SCAP-210ENST00000468965 FBXO41Q8TF61 875 aa18.18■□□□□ 0.5
SCAP-210ENST00000468965 NPHP3Q7Z494 1330 aa18.18■□□□□ 0.5
SCAP-210ENST00000468965 A0A1W2PP64 1363 aa18.17■□□□□ 0.5
SCAP-210ENST00000468965 XPCQ01831 940 aaPredicted RBP18.17■□□□□ 0.5
SCAP-210ENST00000468965 ANKRD36BQ8N2N9 1353 aa18.17■□□□□ 0.5
SCAP-210ENST00000468965 USP6P35125 1406 aa18.16■□□□□ 0.5
SCAP-210ENST00000468965 SOS2Q07890 1332 aaPredicted RBP18.16■□□□□ 0.5
SCAP-210ENST00000468965 ALS2Q96Q42 1657 aa18.15■□□□□ 0.5
SCAP-210ENST00000468965 ZNF316A6NFI3 1004 aaPredicted RBP18.15■□□□□ 0.5
SCAP-210ENST00000468965 KRT28Q7Z3Y7 464 aa18.15■□□□□ 0.5
SCAP-210ENST00000468965 SSH2Q76I76 1423 aa18.15■□□□□ 0.5
SCAP-210ENST00000468965 PSME1Q06323 249 aa18.14■□□□□ 0.49
SCAP-210ENST00000468965 KTN1Q86UP2 1357 aaKnown RBP18.14■□□□□ 0.49
SCAP-210ENST00000468965 TERF2IPQ9NYB0 399 aa18.13■□□□□ 0.49
SCAP-210ENST00000468965 HDGFL2Q7Z4V5 671 aaPredicted RBP18.12■□□□□ 0.49
SCAP-210ENST00000468965 ZNF692Q9BU19 519 aaPredicted RBP18.12■□□□□ 0.49
SCAP-210ENST00000468965 HSPA1LP34931 641 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms