RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 BRPF1P55201 1214 aaPredicted RBP8.7□□□□□ -1.02
SMC4-208ENST00000467468 RSBN1LQ6PCB5 846 aaPredicted RBP8.7□□□□□ -1.02
SMC4-208ENST00000467468 SPDYE5A6NIY4 337 aa8.69□□□□□ -1.02
SMC4-208ENST00000467468 SPTLC1O15269 473 aa8.69□□□□□ -1.02
SMC4-208ENST00000467468 NDUFV2P19404 249 aa8.69□□□□□ -1.02
SMC4-208ENST00000467468 MYSM1Q5VVJ2 828 aa8.69□□□□□ -1.02
SMC4-208ENST00000467468 RIC3Q7Z5B4 369 aa8.69□□□□□ -1.02
SMC4-208ENST00000467468 RETREG3Q86VR2 466 aa8.69□□□□□ -1.02
SMC4-208ENST00000467468 ANKLE1Q8NAG6 615 aa8.68□□□□□ -1.02
SMC4-208ENST00000467468 FAM117AQ9C073 453 aa8.68□□□□□ -1.02
SMC4-208ENST00000467468 CLK2P49760 499 aaKnown RBP8.67□□□□□ -1.02
SMC4-208ENST00000467468 MTMR2Q13614 643 aa8.67□□□□□ -1.02
SMC4-208ENST00000467468 RNF223E7ERA6 249 aa8.66□□□□□ -1.02
SMC4-208ENST00000467468 TUSC1Q2TAM9 212 aa8.66□□□□□ -1.02
SMC4-208ENST00000467468 PRPF38BQ5VTL8 546 aaKnown RBP8.66□□□□□ -1.02
SMC4-208ENST00000467468 FAM160A2Q8N612 972 aaPredicted RBP8.66□□□□□ -1.02
SMC4-208ENST00000467468 ZBTB3Q9H5J0 574 aa8.66□□□□□ -1.02
SMC4-208ENST00000467468 PCDHGC3Q9UN70 934 aa8.66□□□□□ -1.02
SMC4-208ENST00000467468 SH3D19Q5HYK7 790 aa8.65□□□□□ -1.02
SMC4-208ENST00000467468 ATP1B4Q9UN42 357 aaPredicted RBP8.65□□□□□ -1.02
SMC4-208ENST00000467468 SKIV2LQ15477 1246 aaKnown RBP8.64□□□□□ -1.03
SMC4-208ENST00000467468 PRDM9Q9NQV7 894 aa8.64□□□□□ -1.03
SMC4-208ENST00000467468 PLEKHG3A1L390 1219 aa8.63□□□□□ -1.03
SMC4-208ENST00000467468 JUNDP17535 347 aa8.63□□□□□ -1.03
SMC4-208ENST00000467468 MMP16P51512 607 aa8.63□□□□□ -1.03
SMC4-208ENST00000467468 CSPP1Q1MSJ5 1256 aa8.63□□□□□ -1.03
SMC4-208ENST00000467468 SYMPKQ92797 1274 aaKnown RBP8.63□□□□□ -1.03
SMC4-208ENST00000467468 NUTM2BA6NNL0 878 aaPredicted RBP8.62□□□□□ -1.03
SMC4-208ENST00000467468 NUTM2EB1AL46 878 aaPredicted RBP8.62□□□□□ -1.03
SMC4-208ENST00000467468 DXOO77932 396 aaKnown RBP8.62□□□□□ -1.03
SMC4-208ENST00000467468 NUTM2DQ5VT03 806 aaPredicted RBP8.62□□□□□ -1.03
SMC4-208ENST00000467468 NUTM2AQ8IVF1 878 aaPredicted RBP8.62□□□□□ -1.03
SMC4-208ENST00000467468 PRKD2Q9BZL6 878 aa8.62□□□□□ -1.03
SMC4-208ENST00000467468 POLR3EQ9NVU0 708 aa8.62□□□□□ -1.03
SMC4-208ENST00000467468 LIMD1Q9UGP4 676 aa8.62□□□□□ -1.03
SMC4-208ENST00000467468 FCF1Q9Y324 198 aaKnown RBP8.62□□□□□ -1.03
SMC4-208ENST00000467468 V9GY48 417 aaPredicted RBP8.62□□□□□ -1.03
SMC4-208ENST00000467468 PPEF1O14829 653 aaPredicted RBP8.61□□□□□ -1.03
SMC4-208ENST00000467468 IL27Q8NEV9 243 aa8.61□□□□□ -1.03
SMC4-208ENST00000467468 PRR7Q8TB68 274 aa8.61□□□□□ -1.03
SMC4-208ENST00000467468 PCDHB15Q9Y5E8 787 aa8.61□□□□□ -1.03
SMC4-208ENST00000467468 HRCP23327 699 aa8.6□□□□□ -1.03
SMC4-208ENST00000467468 DESI1Q6ICB0 168 aa8.6□□□□□ -1.03
SMC4-208ENST00000467468 PCMTD1Q96MG8 357 aaPredicted RBP8.6□□□□□ -1.03
SMC4-208ENST00000467468 GOPCQ9HD26 462 aa8.6□□□□□ -1.03
SMC4-208ENST00000467468 ZBTB24O43167 697 aaPredicted RBP8.59□□□□□ -1.03
SMC4-208ENST00000467468 LILRB3O75022 631 aa8.58□□□□□ -1.04
SMC4-208ENST00000467468 SLC19A1P41440 591 aa8.58□□□□□ -1.04
SMC4-208ENST00000467468 HELBQ8NG08 1087 aaPredicted RBP8.58□□□□□ -1.04
SMC4-208ENST00000467468 CABLES1Q8TDN4 633 aa8.58□□□□□ -1.04
SMC4-208ENST00000467468 PTPRNQ16849 979 aa8.57□□□□□ -1.04
SMC4-208ENST00000467468 CCDC24Q8N4L8 307 aa8.57□□□□□ -1.04
SMC4-208ENST00000467468 NUDT12Q9BQG2 462 aa8.57□□□□□ -1.04
SMC4-208ENST00000467468 CCNYL3P0C7X3 344 aa8.56□□□□□ -1.04
SMC4-208ENST00000467468 RPIAP49247 311 aa8.56□□□□□ -1.04
SMC4-208ENST00000467468 QPCTQ16769 361 aa8.56□□□□□ -1.04
SMC4-208ENST00000467468 TSC1Q92574 1164 aa8.56□□□□□ -1.04
SMC4-208ENST00000467468 CFAP99D6REC4 459 aa8.55□□□□□ -1.04
SMC4-208ENST00000467468 CD2BP2O95400 341 aaKnown RBP8.54□□□□□ -1.04
SMC4-208ENST00000467468 PLA2G2CQ5R387 149 aa8.54□□□□□ -1.04
SMC4-208ENST00000467468 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.54□□□□□ -1.04
SMC4-208ENST00000467468 SPRYD7Q5W111 196 aa8.53□□□□□ -1.04
SMC4-208ENST00000467468 LIAT1Q6ZQX7 453 aa8.53□□□□□ -1.04
SMC4-208ENST00000467468 PROCA1Q8NCQ7 364 aaPredicted RBP8.53□□□□□ -1.04
SMC4-208ENST00000467468 RTL5Q5HYW3 569 aaPredicted RBP8.52□□□□□ -1.05
SMC4-208ENST00000467468 PPP2R2DQ66LE6 453 aa8.52□□□□□ -1.05
SMC4-208ENST00000467468 LYPD8Q6UX82 237 aa8.52□□□□□ -1.05
SMC4-208ENST00000467468 ZNF598Q86UK7 904 aaKnown RBP8.52□□□□□ -1.05
SMC4-208ENST00000467468 ZNF697Q5TEC3 545 aa8.51□□□□□ -1.05
SMC4-208ENST00000467468 TRIM32Q13049 653 aa8.5□□□□□ -1.05
SMC4-208ENST00000467468 EMID1Q96A84 441 aaPredicted RBP8.5□□□□□ -1.05
SMC4-208ENST00000467468 IRX2Q9BZI1 471 aaPredicted RBP8.5□□□□□ -1.05
SMC4-208ENST00000467468 EVA1BQ9NVM1 165 aa8.5□□□□□ -1.05
SMC4-208ENST00000467468 CTHP32929 405 aa8.49□□□□□ -1.05
SMC4-208ENST00000467468 KCNH2Q12809 1159 aa8.49□□□□□ -1.05
SMC4-208ENST00000467468 LAPTM4AQ15012 233 aa8.48□□□□□ -1.05
SMC4-208ENST00000467468 TMEM132AQ24JP5 1023 aa8.48□□□□□ -1.05
SMC4-208ENST00000467468 GTF3C3Q9Y5Q9 886 aa8.48□□□□□ -1.05
SMC4-208ENST00000467468 AP1G2O75843 785 aa8.47□□□□□ -1.05
SMC4-208ENST00000467468 RFC5P40937 340 aa8.47□□□□□ -1.05
SMC4-208ENST00000467468 TMEM259Q4ZIN3 620 aa8.47□□□□□ -1.05
SMC4-208ENST00000467468 WNT7BP56706 349 aa8.46□□□□□ -1.06
SMC4-208ENST00000467468 UNC93B1Q9H1C4 597 aa8.46□□□□□ -1.06
SMC4-208ENST00000467468 TIMELESSQ9UNS1 1208 aa8.46□□□□□ -1.06
SMC4-208ENST00000467468 PER1O15534 1290 aaPredicted RBP8.45□□□□□ -1.06
SMC4-208ENST00000467468 F12P00748 615 aaPredicted RBP8.45□□□□□ -1.06
SMC4-208ENST00000467468 ARMC2Q8NEN0 867 aa8.45□□□□□ -1.06
SMC4-208ENST00000467468 PDZRN3Q9UPQ7 1066 aa8.45□□□□□ -1.06
SMC4-208ENST00000467468 PRR20EP86478 221 aa8.44□□□□□ -1.06
SMC4-208ENST00000467468 PRR20CP86479 221 aa8.44□□□□□ -1.06
SMC4-208ENST00000467468 PRR20DP86480 221 aa8.44□□□□□ -1.06
SMC4-208ENST00000467468 PRR20BP86481 221 aa8.44□□□□□ -1.06
SMC4-208ENST00000467468 PRR20AP86496 221 aa8.44□□□□□ -1.06
SMC4-208ENST00000467468 CTDSPL2Q05D32 466 aa8.44□□□□□ -1.06
SMC4-208ENST00000467468 MAP10Q9P2G4 905 aa8.44□□□□□ -1.06
SMC4-208ENST00000467468 NRG2O14511 850 aaPredicted RBP8.43□□□□□ -1.06
SMC4-208ENST00000467468 GFRA3O60609 400 aa8.43□□□□□ -1.06
SMC4-208ENST00000467468 USP17L8P0C7I0 530 aa8.43□□□□□ -1.06
SMC4-208ENST00000467468 FOXC1Q12948 553 aa8.43□□□□□ -1.06
SMC4-208ENST00000467468 PTCRAQ6ISU1 281 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms