RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 ARHGEF28Q8N1W1 1705 aaKnown RBP14.04□□□□□ -0.16
PMF1-204ENST00000466489 UBAP1LF5GYI3 381 aa14.03□□□□□ -0.16
PMF1-204ENST00000466489 CADPS2Q86UW7 1296 aa14.03□□□□□ -0.16
PMF1-204ENST00000466489 DCCP43146 1447 aa14.03□□□□□ -0.16
PMF1-204ENST00000466489 NALCNQ8IZF0 1738 aa14.03□□□□□ -0.16
PMF1-204ENST00000466489 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.03□□□□□ -0.16
PMF1-204ENST00000466489 TRAK1Q9UPV9 953 aa14.02□□□□□ -0.17
PMF1-204ENST00000466489 RBM33Q96EV2 1170 aaKnown RBP14.01□□□□□ -0.17
PMF1-204ENST00000466489 NBPF1Q3BBV0 1214 aa14□□□□□ -0.17
PMF1-204ENST00000466489 PRAM1Q96QH2 718 aa14□□□□□ -0.17
PMF1-204ENST00000466489 CARD11Q9BXL7 1154 aa14□□□□□ -0.17
PMF1-204ENST00000466489 CDC42BPGQ6DT37 1551 aa14□□□□□ -0.17
PMF1-204ENST00000466489 NBPF8Q3BBV2 869 aa13.99□□□□□ -0.17
PMF1-204ENST00000466489 GPRASP1Q5JY77 1395 aa13.98□□□□□ -0.17
PMF1-204ENST00000466489 WAPLQ7Z5K2 1190 aa13.98□□□□□ -0.17
PMF1-204ENST00000466489 SAFB2Q14151 953 aaKnown RBP eCLIP13.97□□□□□ -0.17
PMF1-204ENST00000466489 QRICH2Q9H0J4 1663 aa13.97□□□□□ -0.17
PMF1-204ENST00000466489 ADGRB2O60241 1585 aa13.96□□□□□ -0.17
PMF1-204ENST00000466489 CENPJQ9HC77 1338 aaPredicted RBP13.96□□□□□ -0.17
PMF1-204ENST00000466489 PLEKHH1Q9ULM0 1364 aa13.96□□□□□ -0.18
PMF1-204ENST00000466489 PIP4K2BP78356 416 aa13.95□□□□□ -0.18
PMF1-204ENST00000466489 FMN2Q9NZ56 1722 aa13.94□□□□□ -0.18
PMF1-204ENST00000466489 SLAIN2Q9P270 581 aa13.94□□□□□ -0.18
PMF1-204ENST00000466489 GTF3C3Q9Y5Q9 886 aa13.94□□□□□ -0.18
PMF1-204ENST00000466489 SOCS7O14512 581 aa13.93□□□□□ -0.18
PMF1-204ENST00000466489 SLC24A1O60721 1099 aa13.93□□□□□ -0.18
PMF1-204ENST00000466489 ROBO1Q9Y6N7 1651 aa13.93□□□□□ -0.18
PMF1-204ENST00000466489 MINK1Q8N4C8 1332 aaPredicted RBP13.92□□□□□ -0.18
PMF1-204ENST00000466489 ITSN1Q15811 1721 aa13.92□□□□□ -0.18
PMF1-204ENST00000466489 MST1RQ04912 1400 aa13.91□□□□□ -0.18
PMF1-204ENST00000466489 HIRIP3Q9BW71 556 aaPredicted RBP13.9□□□□□ -0.18
PMF1-204ENST00000466489 USP47Q96K76 1375 aa13.9□□□□□ -0.18
PMF1-204ENST00000466489 ANKARQ7Z5J8 1434 aa13.9□□□□□ -0.19
PMF1-204ENST00000466489 KIF1AQ12756 1690 aa13.89□□□□□ -0.19
PMF1-204ENST00000466489 C1orf167Q5SNV9 1468 aa13.89□□□□□ -0.19
PMF1-204ENST00000466489 WASLO00401 505 aaPredicted RBP13.89□□□□□ -0.19
PMF1-204ENST00000466489 TULP4Q9NRJ4 1543 aa13.89□□□□□ -0.19
PMF1-204ENST00000466489 EVC2Q86UK5 1308 aa13.89□□□□□ -0.19
PMF1-204ENST00000466489 SBNO2Q9Y2G9 1366 aa13.88□□□□□ -0.19
PMF1-204ENST00000466489 RGPD8O14715 1765 aaPredicted RBP13.88□□□□□ -0.19
PMF1-204ENST00000466489 DISP3Q9P2K9 1392 aa13.87□□□□□ -0.19
PMF1-204ENST00000466489 SRPK2P78362 688 aaKnown RBP13.87□□□□□ -0.19
PMF1-204ENST00000466489 PHLPP1O60346 1717 aa13.87□□□□□ -0.19
PMF1-204ENST00000466489 ESCO1Q5FWF5 840 aa13.86□□□□□ -0.19
PMF1-204ENST00000466489 NUTM2FA1L443 756 aa13.85□□□□□ -0.19
PMF1-204ENST00000466489 EIF4G2P78344 907 aaKnown RBP eCLIP13.85□□□□□ -0.19
PMF1-204ENST00000466489 CDK19Q9BWU1 502 aa13.85□□□□□ -0.19
PMF1-204ENST00000466489 NHSL1Q5SYE7 1610 aa13.85□□□□□ -0.19
PMF1-204ENST00000466489 AHDC1Q5TGY3 1603 aaPredicted RBP13.84□□□□□ -0.19
PMF1-204ENST00000466489 BRINP3Q76B58 766 aa13.84□□□□□ -0.19
PMF1-204ENST00000466489 ST20-MTHFSA0A0A6YYL1 179 aa13.83□□□□□ -0.2
PMF1-204ENST00000466489 CDCA8Q53HL2 280 aa13.83□□□□□ -0.2
PMF1-204ENST00000466489 MIER1Q8N108 512 aa13.83□□□□□ -0.2
PMF1-204ENST00000466489 NPHP3Q7Z494 1330 aa13.83□□□□□ -0.2
PMF1-204ENST00000466489 ATAD2Q6PL18 1390 aa13.83□□□□□ -0.2
PMF1-204ENST00000466489 USP32Q8NFA0 1604 aa13.82□□□□□ -0.2
PMF1-204ENST00000466489 ATP7BP35670 1465 aa13.82□□□□□ -0.2
PMF1-204ENST00000466489 TMF1P82094 1093 aa13.82□□□□□ -0.2
PMF1-204ENST00000466489 NUDT16Q96DE0 195 aaKnown RBP13.82□□□□□ -0.2
PMF1-204ENST00000466489 PHF8Q9UPP1 1060 aa13.82□□□□□ -0.2
PMF1-204ENST00000466489 TOPAZ1Q8N9V7 1692 aa13.82□□□□□ -0.2
PMF1-204ENST00000466489 ILDR2Q71H61 639 aa13.81□□□□□ -0.2
PMF1-204ENST00000466489 ORAI2Q96SN7 254 aa13.81□□□□□ -0.2
PMF1-204ENST00000466489 CCDC61Q9Y6R9 512 aa13.81□□□□□ -0.2
PMF1-204ENST00000466489 HSPA1LP34931 641 aa13.8□□□□□ -0.2
PMF1-204ENST00000466489 NGDNQ8NEJ9 315 aaKnown RBP13.8□□□□□ -0.2
PMF1-204ENST00000466489 PSME1Q06323 249 aa13.79□□□□□ -0.2
PMF1-204ENST00000466489 CABP2Q9NPB3 220 aa13.79□□□□□ -0.2
PMF1-204ENST00000466489 COL16A1Q07092 1604 aaPredicted RBP13.79□□□□□ -0.2
PMF1-204ENST00000466489 PUS7Q96PZ0 661 aaKnown RBP13.78□□□□□ -0.2
PMF1-204ENST00000466489 PPIP5K1Q6PFW1 1433 aa13.78□□□□□ -0.2
PMF1-204ENST00000466489 FOXO3O43524 673 aa13.77□□□□□ -0.21
PMF1-204ENST00000466489 LRRC59Q96AG4 307 aaKnown RBP13.77□□□□□ -0.21
PMF1-204ENST00000466489 TESK2Q96S53 571 aa13.77□□□□□ -0.21
PMF1-204ENST00000466489 PRR36Q9H6K5 1346 aa13.77□□□□□ -0.21
PMF1-204ENST00000466489 NINLQ9Y2I6 1382 aa13.77□□□□□ -0.21
PMF1-204ENST00000466489 HSPA5P11021 654 aaKnown RBP13.76□□□□□ -0.21
PMF1-204ENST00000466489 PMFBP1Q8TBY8 1022 aa13.76□□□□□ -0.21
PMF1-204ENST00000466489 JCADQ9P266 1359 aa13.75□□□□□ -0.21
PMF1-204ENST00000466489 SHPRHQ149N8 1683 aa13.75□□□□□ -0.21
PMF1-204ENST00000466489 SOS2Q07890 1332 aaPredicted RBP13.74□□□□□ -0.21
PMF1-204ENST00000466489 PLEKHG3A1L390 1219 aa13.74□□□□□ -0.21
PMF1-204ENST00000466489 KRT28Q7Z3Y7 464 aa13.74□□□□□ -0.21
PMF1-204ENST00000466489 TMC1Q8TDI8 760 aa13.74□□□□□ -0.21
PMF1-204ENST00000466489 PXDNQ92626 1479 aa13.74□□□□□ -0.21
PMF1-204ENST00000466489 POLR3AO14802 1390 aaPredicted RBP13.73□□□□□ -0.21
PMF1-204ENST00000466489 ACEP12821 1306 aa13.73□□□□□ -0.21
PMF1-204ENST00000466489 TERF2IPQ9NYB0 399 aa13.73□□□□□ -0.21
PMF1-204ENST00000466489 AKAP12Q02952 1782 aa13.73□□□□□ -0.21
PMF1-204ENST00000466489 SBNO1A3KN83 1393 aa13.72□□□□□ -0.21
PMF1-204ENST00000466489 BRD4O60885 1362 aaPredicted RBP13.72□□□□□ -0.21
PMF1-204ENST00000466489 HDGFL2Q7Z4V5 671 aaPredicted RBP13.72□□□□□ -0.21
PMF1-204ENST00000466489 DDX17Q92841 729 aaKnown RBP13.72□□□□□ -0.21
PMF1-204ENST00000466489 ZNF692Q9BU19 519 aaPredicted RBP13.72□□□□□ -0.21
PMF1-204ENST00000466489 CABP1Q9NZU7 370 aa13.72□□□□□ -0.21
PMF1-204ENST00000466489 TNS3Q68CZ2 1445 aa13.72□□□□□ -0.21
PMF1-204ENST00000466489 ARHGEF10O15013 1369 aa13.71□□□□□ -0.21
PMF1-204ENST00000466489 PAK3O75914 559 aaPredicted RBP13.71□□□□□ -0.21
PMF1-204ENST00000466489 XPCQ01831 940 aaPredicted RBP13.71□□□□□ -0.21
PMF1-204ENST00000466489 POLR3GLQ9BT43 218 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms