RNA–Protein interactions for RNA: ENST00000466396.5

CLTA-206, Transcript of clathrin light chain A, humanhuman

TSL 2 BASIC

Gene CLTA, Length 695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-206ENST00000466396 PRAM1Q96QH2 718 aa33.01■■■□□ 2.87
CLTA-206ENST00000466396 TONSLQ96HA7 1378 aa33■■■□□ 2.87
CLTA-206ENST00000466396 NBPF8Q3BBV2 869 aa32.99■■■□□ 2.87
CLTA-206ENST00000466396 TRPM1Q7Z4N2 1603 aa32.98■■■□□ 2.87
CLTA-206ENST00000466396 CDC42BPGQ6DT37 1551 aa32.97■■■□□ 2.87
CLTA-206ENST00000466396 ARHGEF28Q8N1W1 1705 aaKnown RBP32.96■■■□□ 2.87
CLTA-206ENST00000466396 CLSPNQ9HAW4 1339 aa32.95■■■□□ 2.86
CLTA-206ENST00000466396 SAFB2Q14151 953 aaKnown RBP eCLIP32.94■■■□□ 2.86
CLTA-206ENST00000466396 BRINP3Q76B58 766 aa32.93■■■□□ 2.86
CLTA-206ENST00000466396 C1orf167Q5SNV9 1468 aa32.93■■■□□ 2.86
CLTA-206ENST00000466396 POGKQ9P215 609 aa32.92■■■□□ 2.86
CLTA-206ENST00000466396 FMN2Q9NZ56 1722 aa32.87■■■□□ 2.85
CLTA-206ENST00000466396 CCER1Q8TC90 406 aaPredicted RBP32.86■■■□□ 2.85
CLTA-206ENST00000466396 ADGRB2O60241 1585 aa32.84■■■□□ 2.85
CLTA-206ENST00000466396 ORAI2Q96SN7 254 aa32.84■■■□□ 2.85
CLTA-206ENST00000466396 PHLPP1O60346 1717 aa32.84■■■□□ 2.85
CLTA-206ENST00000466396 AHDC1Q5TGY3 1603 aaPredicted RBP32.84■■■□□ 2.85
CLTA-206ENST00000466396 ROCK2O75116 1388 aaKnown RBP32.83■■■□□ 2.85
CLTA-206ENST00000466396 MINK1Q8N4C8 1332 aaPredicted RBP32.82■■■□□ 2.84
CLTA-206ENST00000466396 NUTM2FA1L443 756 aa32.82■■■□□ 2.84
CLTA-206ENST00000466396 HIRIP3Q9BW71 556 aaPredicted RBP32.81■■■□□ 2.84
CLTA-206ENST00000466396 GPRASP1Q5JY77 1395 aa32.81■■■□□ 2.84
CLTA-206ENST00000466396 COL16A1Q07092 1604 aaPredicted RBP32.8■■■□□ 2.84
CLTA-206ENST00000466396 NHSL1Q5SYE7 1610 aa32.8■■■□□ 2.84
CLTA-206ENST00000466396 RALGAPBQ86X10 1494 aa32.79■■■□□ 2.84
CLTA-206ENST00000466396 DDX17Q92841 729 aaKnown RBP32.78■■■□□ 2.84
CLTA-206ENST00000466396 RGPD8O14715 1765 aaPredicted RBP32.77■■■□□ 2.84
CLTA-206ENST00000466396 USP32Q8NFA0 1604 aa32.75■■■□□ 2.83
CLTA-206ENST00000466396 ESCO1Q5FWF5 840 aa32.74■■■□□ 2.83
CLTA-206ENST00000466396 TIMELESSQ9UNS1 1208 aa32.74■■■□□ 2.83
CLTA-206ENST00000466396 WASLO00401 505 aaPredicted RBP32.72■■■□□ 2.83
CLTA-206ENST00000466396 CENPJQ9HC77 1338 aaPredicted RBP32.72■■■□□ 2.83
CLTA-206ENST00000466396 QRICH2Q9H0J4 1663 aa32.69■■■□□ 2.82
CLTA-206ENST00000466396 PRR36Q9H6K5 1346 aa32.69■■■□□ 2.82
CLTA-206ENST00000466396 CARD11Q9BXL7 1154 aa32.68■■■□□ 2.82
CLTA-206ENST00000466396 ANKARQ7Z5J8 1434 aa32.68■■■□□ 2.82
CLTA-206ENST00000466396 TULP4Q9NRJ4 1543 aa32.67■■■□□ 2.82
CLTA-206ENST00000466396 SOS2Q07890 1332 aaPredicted RBP32.64■■■□□ 2.82
CLTA-206ENST00000466396 CDK19Q9BWU1 502 aa32.64■■■□□ 2.82
CLTA-206ENST00000466396 FOXO3O43524 673 aa32.63■■■□□ 2.81
CLTA-206ENST00000466396 KIF1AQ12756 1690 aa32.62■■■□□ 2.81
CLTA-206ENST00000466396 JCADQ9P266 1359 aa32.62■■■□□ 2.81
CLTA-206ENST00000466396 PHF8Q9UPP1 1060 aa32.61■■■□□ 2.81
CLTA-206ENST00000466396 PXDNQ92626 1479 aa32.61■■■□□ 2.81
CLTA-206ENST00000466396 EIF3AQ14152 1382 aaKnown RBP32.6■■■□□ 2.81
CLTA-206ENST00000466396 ATP7BP35670 1465 aa32.6■■■□□ 2.81
CLTA-206ENST00000466396 MED1Q15648 1581 aaPredicted RBP32.59■■■□□ 2.81
CLTA-206ENST00000466396 SHPRHQ149N8 1683 aa32.59■■■□□ 2.81
CLTA-206ENST00000466396 NPHP3Q7Z494 1330 aa32.58■■■□□ 2.81
CLTA-206ENST00000466396 XPCQ01831 940 aaPredicted RBP32.57■■■□□ 2.8
CLTA-206ENST00000466396 LRRC59Q96AG4 307 aaKnown RBP32.57■■■□□ 2.8
CLTA-206ENST00000466396 NUDT16Q96DE0 195 aaKnown RBP32.57■■■□□ 2.8
CLTA-206ENST00000466396 PMFBP1Q8TBY8 1022 aa32.55■■■□□ 2.8
CLTA-206ENST00000466396 TOPAZ1Q8N9V7 1692 aa32.53■■■□□ 2.8
CLTA-206ENST00000466396 CABP2Q9NPB3 220 aa32.52■■■□□ 2.8
CLTA-206ENST00000466396 PNPLA6Q8IY17 1366 aa32.52■■■□□ 2.8
CLTA-206ENST00000466396 ITSN1Q15811 1721 aa32.51■■■□□ 2.79
CLTA-206ENST00000466396 SBNO2Q9Y2G9 1366 aa32.49■■■□□ 2.79
CLTA-206ENST00000466396 KRT28Q7Z3Y7 464 aa32.49■■■□□ 2.79
CLTA-206ENST00000466396 SRPK2P78362 688 aaKnown RBP32.48■■■□□ 2.79
CLTA-206ENST00000466396 SPATA31A6Q5VVP1 1343 aa32.48■■■□□ 2.79
CLTA-206ENST00000466396 CCDC61Q9Y6R9 512 aa32.47■■■□□ 2.79
CLTA-206ENST00000466396 LRP6O75581 1613 aa32.47■■■□□ 2.79
CLTA-206ENST00000466396 EVC2Q86UK5 1308 aa32.47■■■□□ 2.79
CLTA-206ENST00000466396 DISP3Q9P2K9 1392 aa32.45■■■□□ 2.78
CLTA-206ENST00000466396 ST20-MTHFSA0A0A6YYL1 179 aa32.44■■■□□ 2.78
CLTA-206ENST00000466396 PSME1Q06323 249 aa32.43■■■□□ 2.78
CLTA-206ENST00000466396 TESK2Q96S53 571 aa32.43■■■□□ 2.78
CLTA-206ENST00000466396 SPATA31A3Q5VYP0 1347 aa32.43■■■□□ 2.78
CLTA-206ENST00000466396 PLEKHG3A1L390 1219 aa32.42■■■□□ 2.78
CLTA-206ENST00000466396 TRPM3Q9HCF6 1732 aaPredicted RBP32.42■■■□□ 2.78
CLTA-206ENST00000466396 USP47Q96K76 1375 aa32.42■■■□□ 2.78
CLTA-206ENST00000466396 COL22A1Q8NFW1 1626 aaPredicted RBP32.41■■■□□ 2.78
CLTA-206ENST00000466396 NGDNQ8NEJ9 315 aaKnown RBP32.4■■■□□ 2.78
CLTA-206ENST00000466396 POLR3AO14802 1390 aaPredicted RBP32.4■■■□□ 2.78
CLTA-206ENST00000466396 PPIP5K1Q6PFW1 1433 aa32.4■■■□□ 2.78
CLTA-206ENST00000466396 SBNO1A3KN83 1393 aa32.39■■■□□ 2.78
CLTA-206ENST00000466396 ACEP12821 1306 aa32.38■■■□□ 2.77
CLTA-206ENST00000466396 NUTM2BA6NNL0 878 aaPredicted RBP32.38■■■□□ 2.77
CLTA-206ENST00000466396 NUTM2EB1AL46 878 aaPredicted RBP32.38■■■□□ 2.77
CLTA-206ENST00000466396 NUTM2AQ8IVF1 878 aaPredicted RBP32.38■■■□□ 2.77
CLTA-206ENST00000466396 TNS3Q68CZ2 1445 aa32.36■■■□□ 2.77
CLTA-206ENST00000466396 CABP1Q9NZU7 370 aa32.35■■■□□ 2.77
CLTA-206ENST00000466396 RGS17Q9UGC6 210 aaPredicted RBP32.33■■■□□ 2.77
CLTA-206ENST00000466396 ALS2Q96Q42 1657 aa32.32■■■□□ 2.76
CLTA-206ENST00000466396 ATAD2Q6PL18 1390 aa32.29■■■□□ 2.76
CLTA-206ENST00000466396 PHF23Q9BUL5 403 aaPredicted RBP32.28■■■□□ 2.76
CLTA-206ENST00000466396 ARHGEF10O15013 1369 aa32.25■■■□□ 2.75
CLTA-206ENST00000466396 MEX3CQ5U5Q3 659 aaKnown RBP32.25■■■□□ 2.75
CLTA-206ENST00000466396 LMOD2Q6P5Q4 547 aa32.25■■■□□ 2.75
CLTA-206ENST00000466396 PAK3O75914 559 aaPredicted RBP32.24■■■□□ 2.75
CLTA-206ENST00000466396 PUS7Q96PZ0 661 aaKnown RBP32.24■■■□□ 2.75
CLTA-206ENST00000466396 ADAMTS2O95450 1211 aa32.23■■■□□ 2.75
CLTA-206ENST00000466396 CABLES1Q8TDN4 633 aa32.23■■■□□ 2.75
CLTA-206ENST00000466396 AKAP12Q02952 1782 aa32.22■■■□□ 2.75
CLTA-206ENST00000466396 ABCA3Q99758 1704 aa32.21■■■□□ 2.75
CLTA-206ENST00000466396 USP6P35125 1406 aa32.21■■■□□ 2.75
CLTA-206ENST00000466396 SLC24A1O60721 1099 aa32.21■■■□□ 2.75
CLTA-206ENST00000466396 CPSF1Q10570 1443 aaKnown RBP32.2■■■□□ 2.75
CLTA-206ENST00000466396 SSH2Q76I76 1423 aa32.19■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms