RNA–Protein interactions for RNA: ENST00000466373.1

UFD1-206, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 3,059 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-206ENST00000466373 MS4A1P11836 297 aa13.58□□□□□ -0.24
UFD1-206ENST00000466373 MYO3AQ8NEV4 1616 aa13.58□□□□□ -0.24
UFD1-206ENST00000466373 WWC1Q8IX03 1113 aa13.58□□□□□ -0.24
UFD1-206ENST00000466373 RPGRIP1LQ68CZ1 1315 aa13.57□□□□□ -0.24
UFD1-206ENST00000466373 KDM2BQ8NHM5 1336 aa13.57□□□□□ -0.24
UFD1-206ENST00000466373 POLR3AO14802 1390 aaPredicted RBP13.56□□□□□ -0.24
UFD1-206ENST00000466373 CAMSAP1Q5T5Y3 1602 aa13.56□□□□□ -0.24
UFD1-206ENST00000466373 CGNL1Q0VF96 1302 aa13.56□□□□□ -0.24
UFD1-206ENST00000466373 EVC2Q86UK5 1308 aa13.56□□□□□ -0.24
UFD1-206ENST00000466373 YEATS2Q9ULM3 1422 aa13.56□□□□□ -0.24
UFD1-206ENST00000466373 RGS3P49796 1198 aa13.55□□□□□ -0.24
UFD1-206ENST00000466373 CYB5RLQ6IPT4 315 aa13.55□□□□□ -0.24
UFD1-206ENST00000466373 CENPQQ7L2Z9 268 aaPredicted RBP13.55□□□□□ -0.24
UFD1-206ENST00000466373 TCP11L2Q8N4U5 519 aa13.55□□□□□ -0.24
UFD1-206ENST00000466373 CANXP27824 592 aaKnown RBP13.55□□□□□ -0.24
UFD1-206ENST00000466373 SRPK2P78362 688 aaKnown RBP13.55□□□□□ -0.24
UFD1-206ENST00000466373 FRAT1Q92837 279 aaPredicted RBP13.54□□□□□ -0.24
UFD1-206ENST00000466373 GLI2P10070 1586 aa13.54□□□□□ -0.24
UFD1-206ENST00000466373 ZC3H13Q5T200 1668 aaKnown RBP13.53□□□□□ -0.24
UFD1-206ENST00000466373 FBXO31Q5XUX0 539 aaPredicted RBP13.53□□□□□ -0.24
UFD1-206ENST00000466373 PANK1Q8TE04 598 aa13.53□□□□□ -0.24
UFD1-206ENST00000466373 DIP2CQ9Y2E4 1556 aa13.53□□□□□ -0.24
UFD1-206ENST00000466373 RUNDC1Q96C34 613 aa13.53□□□□□ -0.24
UFD1-206ENST00000466373 NEO1Q92859 1461 aa13.53□□□□□ -0.24
UFD1-206ENST00000466373 MINK1Q8N4C8 1332 aaPredicted RBP13.53□□□□□ -0.24
UFD1-206ENST00000466373 BCL2L13Q9BXK5 485 aa13.53□□□□□ -0.24
UFD1-206ENST00000466373 U2AF1L5P0DN76 240 aaPredicted RBP13.52□□□□□ -0.24
UFD1-206ENST00000466373 U2AF1Q01081 240 aaKnown RBP eCLIP13.52□□□□□ -0.247e-17■□□□□ 9.9
UFD1-206ENST00000466373 LAS1LQ9Y4W2 734 aaKnown RBP13.52□□□□□ -0.24
UFD1-206ENST00000466373 COG6Q9Y2V7 657 aa13.52□□□□□ -0.25
UFD1-206ENST00000466373 NEXMIFQ5QGS0 1516 aa13.52□□□□□ -0.25
UFD1-206ENST00000466373 CFAP53Q96M91 514 aa13.51□□□□□ -0.25
UFD1-206ENST00000466373 GGNBP2Q9H3C7 697 aa13.51□□□□□ -0.25
UFD1-206ENST00000466373 TULP4Q9NRJ4 1543 aa13.51□□□□□ -0.25
UFD1-206ENST00000466373 SHPRHQ149N8 1683 aa13.5□□□□□ -0.25
UFD1-206ENST00000466373 PRAM1Q96QH2 718 aa13.5□□□□□ -0.25
UFD1-206ENST00000466373 SLC52A1Q9NWF4 448 aa13.5□□□□□ -0.25
UFD1-206ENST00000466373 POGKQ9P215 609 aa13.5□□□□□ -0.25
UFD1-206ENST00000466373 DEKP35659 375 aaKnown RBP13.49□□□□□ -0.25
UFD1-206ENST00000466373 STAG3Q9UJ98 1225 aa13.49□□□□□ -0.25
UFD1-206ENST00000466373 ANKRD36BQ8N2N9 1353 aa13.49□□□□□ -0.25
UFD1-206ENST00000466373 ARHGEF28Q8N1W1 1705 aaKnown RBP13.49□□□□□ -0.25
UFD1-206ENST00000466373 U2SURPO15042 1029 aaKnown RBP13.49□□□□□ -0.25
UFD1-206ENST00000466373 IGHDP01880 384 aa13.49□□□□□ -0.25
UFD1-206ENST00000466373 TNNQ9UQP3 1299 aa13.49□□□□□ -0.25
UFD1-206ENST00000466373 MYO5BQ9ULV0 1848 aa13.49□□□□□ -0.25
UFD1-206ENST00000466373 PIK3C2BO00750 1634 aa13.48□□□□□ -0.25
UFD1-206ENST00000466373 NGEFQ8N5V2 710 aa13.48□□□□□ -0.25
UFD1-206ENST00000466373 A0A1W2PP64 1363 aa13.48□□□□□ -0.25
UFD1-206ENST00000466373 SLC4A3P48751 1232 aa13.48□□□□□ -0.25
UFD1-206ENST00000466373 FAM69CQ0P6D2 419 aa13.47□□□□□ -0.25
UFD1-206ENST00000466373 CLUAP1Q96AJ1 413 aa13.47□□□□□ -0.25
UFD1-206ENST00000466373 RICTORQ6R327 1708 aa13.47□□□□□ -0.25
UFD1-206ENST00000466373 RTL5Q5HYW3 569 aaPredicted RBP13.47□□□□□ -0.25
UFD1-206ENST00000466373 RARSP54136 660 aaKnown RBP13.46□□□□□ -0.25
UFD1-206ENST00000466373 MLECQ14165 292 aa13.46□□□□□ -0.25
UFD1-206ENST00000466373 FAM161AQ3B820 660 aa13.45□□□□□ -0.26
UFD1-206ENST00000466373 C8orf34Q49A92 452 aa13.45□□□□□ -0.26
UFD1-206ENST00000466373 ARHGAP31Q2M1Z3 1444 aa13.45□□□□□ -0.26
UFD1-206ENST00000466373 PDE3AQ14432 1141 aa13.45□□□□□ -0.26
UFD1-206ENST00000466373 BCL11AQ9H165 835 aa13.45□□□□□ -0.26
UFD1-206ENST00000466373 RLBP1P12271 317 aa13.45□□□□□ -0.26
UFD1-206ENST00000466373 TSR2Q969E8 191 aaKnown RBP13.44□□□□□ -0.26
UFD1-206ENST00000466373 FYB1O15117 783 aa13.43□□□□□ -0.26
UFD1-206ENST00000466373 FBLN1P23142 703 aa13.43□□□□□ -0.26
UFD1-206ENST00000466373 WDR63Q8IWG1 891 aa13.43□□□□□ -0.26
UFD1-206ENST00000466373 PHF23Q9BUL5 403 aaPredicted RBP13.43□□□□□ -0.26
UFD1-206ENST00000466373 IQSEC2Q5JU85 1478 aa13.43□□□□□ -0.26
UFD1-206ENST00000466373 PUS7Q96PZ0 661 aaKnown RBP13.43□□□□□ -0.26
UFD1-206ENST00000466373 PPM1GO15355 546 aaPredicted RBP13.42□□□□□ -0.26
UFD1-206ENST00000466373 CDK19Q9BWU1 502 aa13.42□□□□□ -0.26
UFD1-206ENST00000466373 TERF2IPQ9NYB0 399 aa13.42□□□□□ -0.26
UFD1-206ENST00000466373 CABP1Q9NZU7 370 aa13.42□□□□□ -0.26
UFD1-206ENST00000466373 YTHDC2Q9H6S0 1430 aaKnown RBP13.42□□□□□ -0.26
UFD1-206ENST00000466373 WAPLQ7Z5K2 1190 aa13.42□□□□□ -0.26
UFD1-206ENST00000466373 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.42□□□□□ -0.26
UFD1-206ENST00000466373 PREX1Q8TCU6 1659 aa13.42□□□□□ -0.26
UFD1-206ENST00000466373 USP32Q8NFA0 1604 aa13.42□□□□□ -0.26
UFD1-206ENST00000466373 NSD2O96028 1365 aa13.41□□□□□ -0.26
UFD1-206ENST00000466373 ABCC11Q96J66 1382 aa13.41□□□□□ -0.26
UFD1-206ENST00000466373 NEFMP07197 916 aa13.41□□□□□ -0.26
UFD1-206ENST00000466373 TMEM131LA2VDJ0 1609 aa13.41□□□□□ -0.26
UFD1-206ENST00000466373 PTPRMP28827 1452 aa13.41□□□□□ -0.26
UFD1-206ENST00000466373 TSPOAP1O95153 1857 aa13.41□□□□□ -0.26
UFD1-206ENST00000466373 MYH16Q9H6N6 1097 aa13.41□□□□□ -0.26
UFD1-206ENST00000466373 ZFYVE9O95405 1425 aa13.4□□□□□ -0.26
UFD1-206ENST00000466373 DDRGK1Q96HY6 314 aa13.4□□□□□ -0.26
UFD1-206ENST00000466373 CCDC27Q2M243 656 aa13.4□□□□□ -0.26
UFD1-206ENST00000466373 PCDHB15Q9Y5E8 787 aa13.4□□□□□ -0.26
UFD1-206ENST00000466373 DAXXQ9UER7 740 aaPredicted RBP13.39□□□□□ -0.27
UFD1-206ENST00000466373 MAPK8IP3Q9UPT6 1336 aa13.39□□□□□ -0.27
UFD1-206ENST00000466373 ATAD2Q6PL18 1390 aa13.39□□□□□ -0.27
UFD1-206ENST00000466373 TMPOP42166 694 aaKnown RBP13.38□□□□□ -0.27
UFD1-206ENST00000466373 HDGFL2Q7Z4V5 671 aaPredicted RBP13.38□□□□□ -0.27
UFD1-206ENST00000466373 EXOSC9Q06265 439 aaKnown RBP13.38□□□□□ -0.27
UFD1-206ENST00000466373 PLEKHF1Q96S99 279 aa13.38□□□□□ -0.27
UFD1-206ENST00000466373 CD163L1Q9NR16 1453 aa13.37□□□□□ -0.27
UFD1-206ENST00000466373 NINLQ9Y2I6 1382 aa13.37□□□□□ -0.27
UFD1-206ENST00000466373 TRIM35Q9UPQ4 493 aa13.37□□□□□ -0.27
UFD1-206ENST00000466373 RIPK4P57078 832 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms