RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 CDC42BPGQ6DT37 1551 aa37.37■■■■□ 3.57
SMC4-206ENST00000465903 NBPF1Q3BBV0 1214 aa37.36■■■■□ 3.57
SMC4-206ENST00000465903 PRAM1Q96QH2 718 aa37.36■■■■□ 3.57
SMC4-206ENST00000465903 PHLPP1O60346 1717 aa37.35■■■■□ 3.57
SMC4-206ENST00000465903 C1orf167Q5SNV9 1468 aa37.34■■■■□ 3.57
SMC4-206ENST00000465903 ARHGEF28Q8N1W1 1705 aaKnown RBP37.31■■■■□ 3.56
SMC4-206ENST00000465903 AHDC1Q5TGY3 1603 aaPredicted RBP37.29■■■■□ 3.56
SMC4-206ENST00000465903 SAFB2Q14151 953 aaKnown RBP eCLIP37.29■■■■□ 3.56
SMC4-206ENST00000465903 POGKQ9P215 609 aa37.29■■■■□ 3.56
SMC4-206ENST00000465903 TRPM1Q7Z4N2 1603 aa37.28■■■■□ 3.56
SMC4-206ENST00000465903 FMN2Q9NZ56 1722 aa37.27■■■■□ 3.56
SMC4-206ENST00000465903 COL16A1Q07092 1604 aaPredicted RBP37.25■■■■□ 3.55
SMC4-206ENST00000465903 NHSL1Q5SYE7 1610 aa37.25■■■■□ 3.55
SMC4-206ENST00000465903 NBPF8Q3BBV2 869 aa37.24■■■■□ 3.55
SMC4-206ENST00000465903 ORAI2Q96SN7 254 aa37.24■■■■□ 3.55
SMC4-206ENST00000465903 TONSLQ96HA7 1378 aa37.24■■■■□ 3.55
SMC4-206ENST00000465903 RGPD8O14715 1765 aaPredicted RBP37.22■■■■□ 3.55
SMC4-206ENST00000465903 ADGRB2O60241 1585 aa37.2■■■■□ 3.55
SMC4-206ENST00000465903 NUTM2FA1L443 756 aa37.19■■■■□ 3.54
SMC4-206ENST00000465903 DDX17Q92841 729 aaKnown RBP37.17■■■■□ 3.54
SMC4-206ENST00000465903 MINK1Q8N4C8 1332 aaPredicted RBP37.15■■■■□ 3.54
SMC4-206ENST00000465903 ESCO1Q5FWF5 840 aa37.14■■■■□ 3.54
SMC4-206ENST00000465903 HIRIP3Q9BW71 556 aaPredicted RBP37.14■■■■□ 3.54
SMC4-206ENST00000465903 CLSPNQ9HAW4 1339 aa37.12■■■■□ 3.53
SMC4-206ENST00000465903 MED1Q15648 1581 aaPredicted RBP37.11■■■■□ 3.53
SMC4-206ENST00000465903 USP32Q8NFA0 1604 aa37.1■■■■□ 3.53
SMC4-206ENST00000465903 JCADQ9P266 1359 aa37.09■■■■□ 3.53
SMC4-206ENST00000465903 ROCK2O75116 1388 aaKnown RBP37.08■■■■□ 3.53
SMC4-206ENST00000465903 WASLO00401 505 aaPredicted RBP37.06■■■■□ 3.52
SMC4-206ENST00000465903 GPRASP1Q5JY77 1395 aa37.05■■■■□ 3.52
SMC4-206ENST00000465903 SHPRHQ149N8 1683 aa37.05■■■■□ 3.52
SMC4-206ENST00000465903 SOS2Q07890 1332 aaPredicted RBP37.04■■■■□ 3.52
SMC4-206ENST00000465903 KIF1AQ12756 1690 aa37.02■■■■□ 3.52
SMC4-206ENST00000465903 DISP3Q9P2K9 1392 aa37.02■■■■□ 3.52
SMC4-206ENST00000465903 ANKARQ7Z5J8 1434 aa37.02■■■■□ 3.52
SMC4-206ENST00000465903 LRRC59Q96AG4 307 aaKnown RBP37.01■■■■□ 3.52
SMC4-206ENST00000465903 CENPJQ9HC77 1338 aaPredicted RBP37.01■■■■□ 3.52
SMC4-206ENST00000465903 RALGAPBQ86X10 1494 aa37.01■■■■□ 3.51
SMC4-206ENST00000465903 QRICH2Q9H0J4 1663 aa37■■■■□ 3.51
SMC4-206ENST00000465903 FOXO3O43524 673 aa37■■■■□ 3.51
SMC4-206ENST00000465903 PRR36Q9H6K5 1346 aa37■■■■□ 3.51
SMC4-206ENST00000465903 CCER1Q8TC90 406 aaPredicted RBP36.99■■■■□ 3.51
SMC4-206ENST00000465903 TULP4Q9NRJ4 1543 aa36.99■■■■□ 3.51
SMC4-206ENST00000465903 PHF8Q9UPP1 1060 aa36.98■■■■□ 3.51
SMC4-206ENST00000465903 NPHP3Q7Z494 1330 aa36.98■■■■□ 3.51
SMC4-206ENST00000465903 PXDNQ92626 1479 aa36.96■■■■□ 3.51
SMC4-206ENST00000465903 EIF3AQ14152 1382 aaKnown RBP36.95■■■■□ 3.51
SMC4-206ENST00000465903 CDK19Q9BWU1 502 aa36.95■■■■□ 3.51
SMC4-206ENST00000465903 TIMELESSQ9UNS1 1208 aa36.94■■■■□ 3.5
SMC4-206ENST00000465903 XPCQ01831 940 aaPredicted RBP36.92■■■■□ 3.5
SMC4-206ENST00000465903 CARD11Q9BXL7 1154 aa36.92■■■■□ 3.5
SMC4-206ENST00000465903 SPATA31A6Q5VVP1 1343 aa36.91■■■■□ 3.5
SMC4-206ENST00000465903 PNPLA6Q8IY17 1366 aa36.91■■■■□ 3.5
SMC4-206ENST00000465903 ATP7BP35670 1465 aa36.89■■■■□ 3.5
SMC4-206ENST00000465903 PMFBP1Q8TBY8 1022 aa36.89■■■■□ 3.5
SMC4-206ENST00000465903 NUDT16Q96DE0 195 aaKnown RBP36.89■■■■□ 3.5
SMC4-206ENST00000465903 LRP6O75581 1613 aa36.88■■■■□ 3.49
SMC4-206ENST00000465903 ITSN1Q15811 1721 aa36.88■■■■□ 3.49
SMC4-206ENST00000465903 KRT28Q7Z3Y7 464 aa36.86■■■■□ 3.49
SMC4-206ENST00000465903 TOPAZ1Q8N9V7 1692 aa36.83■■■■□ 3.49
SMC4-206ENST00000465903 COL22A1Q8NFW1 1626 aaPredicted RBP36.8■■■■□ 3.48
SMC4-206ENST00000465903 CABP2Q9NPB3 220 aa36.79■■■■□ 3.48
SMC4-206ENST00000465903 NUTM2BA6NNL0 878 aaPredicted RBP36.78■■■■□ 3.48
SMC4-206ENST00000465903 NUTM2EB1AL46 878 aaPredicted RBP36.78■■■■□ 3.48
SMC4-206ENST00000465903 NUTM2AQ8IVF1 878 aaPredicted RBP36.78■■■■□ 3.48
SMC4-206ENST00000465903 PHF23Q9BUL5 403 aaPredicted RBP36.78■■■■□ 3.48
SMC4-206ENST00000465903 RGS17Q9UGC6 210 aaPredicted RBP36.78■■■■□ 3.48
SMC4-206ENST00000465903 CCDC61Q9Y6R9 512 aa36.78■■■■□ 3.48
SMC4-206ENST00000465903 SPATA31A3Q5VYP0 1347 aa36.78■■■■□ 3.48
SMC4-206ENST00000465903 SRPK2P78362 688 aaKnown RBP36.77■■■■□ 3.48
SMC4-206ENST00000465903 PSME1Q06323 249 aa36.77■■■■□ 3.48
SMC4-206ENST00000465903 TRPM3Q9HCF6 1732 aaPredicted RBP36.75■■■■□ 3.47
SMC4-206ENST00000465903 EVC2Q86UK5 1308 aa36.74■■■■□ 3.47
SMC4-206ENST00000465903 SBNO1A3KN83 1393 aa36.73■■■■□ 3.47
SMC4-206ENST00000465903 SBNO2Q9Y2G9 1366 aa36.73■■■■□ 3.47
SMC4-206ENST00000465903 PLEKHG3A1L390 1219 aa36.72■■■■□ 3.47
SMC4-206ENST00000465903 ILDR2Q71H61 639 aa36.72■■■■□ 3.47
SMC4-206ENST00000465903 NGDNQ8NEJ9 315 aaKnown RBP36.72■■■■□ 3.47
SMC4-206ENST00000465903 TNS3Q68CZ2 1445 aa36.7■■■■□ 3.47
SMC4-206ENST00000465903 POLR3AO14802 1390 aaPredicted RBP36.68■■■■□ 3.46
SMC4-206ENST00000465903 MEX3CQ5U5Q3 659 aaKnown RBP36.68■■■■□ 3.46
SMC4-206ENST00000465903 ACEP12821 1306 aa36.67■■■■□ 3.46
SMC4-206ENST00000465903 PPIP5K1Q6PFW1 1433 aa36.67■■■■□ 3.46
SMC4-206ENST00000465903 ALS2Q96Q42 1657 aa36.65■■■■□ 3.46
SMC4-206ENST00000465903 ST20-MTHFSA0A0A6YYL1 179 aa36.64■■■■□ 3.46
SMC4-206ENST00000465903 TESK2Q96S53 571 aa36.62■■■■□ 3.45
SMC4-206ENST00000465903 CABP1Q9NZU7 370 aa36.62■■■■□ 3.45
SMC4-206ENST00000465903 MARF1Q9Y4F3 1742 aaKnown RBP36.61■■■■□ 3.45
SMC4-206ENST00000465903 ADAMTS2O95450 1211 aa36.6■■■■□ 3.45
SMC4-206ENST00000465903 USP47Q96K76 1375 aa36.59■■■■□ 3.45
SMC4-206ENST00000465903 ARHGEF10O15013 1369 aa36.58■■■■□ 3.45
SMC4-206ENST00000465903 LMOD2Q6P5Q4 547 aa36.58■■■■□ 3.45
SMC4-206ENST00000465903 POTEAQ6S8J7 498 aa36.58■■■■□ 3.45
SMC4-206ENST00000465903 ABCA3Q99758 1704 aa36.56■■■■□ 3.44
SMC4-206ENST00000465903 CABLES1Q8TDN4 633 aa36.55■■■■□ 3.44
SMC4-206ENST00000465903 C8orf37Q96NL8 207 aa36.54■■■■□ 3.44
SMC4-206ENST00000465903 ATAD2Q6PL18 1390 aa36.53■■■■□ 3.44
SMC4-206ENST00000465903 PAK3O75914 559 aaPredicted RBP36.53■■■■□ 3.44
SMC4-206ENST00000465903 AFF2P51816 1311 aa36.53■■■■□ 3.44
SMC4-206ENST00000465903 AKAP12Q02952 1782 aa36.51■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms