RNA–Protein interactions for RNA: ENST00000464654.1

TM9SF3-203, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 5

Gene TM9SF3, Length 658 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-203ENST00000464654 PPEF1O14829 653 aaPredicted RBP8.65□□□□□ -1.02
TM9SF3-203ENST00000464654 EMID1Q96A84 441 aaPredicted RBP8.65□□□□□ -1.02
TM9SF3-203ENST00000464654 MOXD2PA6NHM9 499 aa8.64□□□□□ -1.03
TM9SF3-203ENST00000464654 DXOO77932 396 aaKnown RBP8.64□□□□□ -1.03
TM9SF3-203ENST00000464654 RETREG3Q86VR2 466 aa8.64□□□□□ -1.03
TM9SF3-203ENST00000464654 TBC1D2Q9BYX2 928 aa8.64□□□□□ -1.03
TM9SF3-203ENST00000464654 PCDHGC3Q9UN70 934 aa8.64□□□□□ -1.03
TM9SF3-203ENST00000464654 SPDYE5A6NIY4 337 aa8.63□□□□□ -1.03
TM9SF3-203ENST00000464654 RPIAP49247 311 aa8.63□□□□□ -1.03
TM9SF3-203ENST00000464654 GUCA2AQ02747 115 aa8.63□□□□□ -1.03
TM9SF3-203ENST00000464654 SPRYD7Q5W111 196 aa8.63□□□□□ -1.03
TM9SF3-203ENST00000464654 LIAT1Q6ZQX7 453 aa8.63□□□□□ -1.03
TM9SF3-203ENST00000464654 PRDM9Q9NQV7 894 aa8.63□□□□□ -1.03
TM9SF3-203ENST00000464654 FCF1Q9Y324 198 aaKnown RBP8.63□□□□□ -1.03
TM9SF3-203ENST00000464654 LCE2BO14633 110 aa8.62□□□□□ -1.03
TM9SF3-203ENST00000464654 PLA2G2CQ5R387 149 aa8.62□□□□□ -1.03
TM9SF3-203ENST00000464654 ZNF598Q86UK7 904 aaKnown RBP8.62□□□□□ -1.03
TM9SF3-203ENST00000464654 SPTLC1O15269 473 aa8.61□□□□□ -1.03
TM9SF3-203ENST00000464654 RSBN1LQ6PCB5 846 aaPredicted RBP8.61□□□□□ -1.03
TM9SF3-203ENST00000464654 NDUFV2P19404 249 aa8.6□□□□□ -1.03
TM9SF3-203ENST00000464654 TUSC1Q2TAM9 212 aa8.6□□□□□ -1.03
TM9SF3-203ENST00000464654 C6orf229H3BNL8 230 aa8.59□□□□□ -1.03
TM9SF3-203ENST00000464654 NRG2O14511 850 aaPredicted RBP8.59□□□□□ -1.03
TM9SF3-203ENST00000464654 JUNDP17535 347 aa8.59□□□□□ -1.03
TM9SF3-203ENST00000464654 MTMR2Q13614 643 aa8.59□□□□□ -1.03
TM9SF3-203ENST00000464654 PRPF38BQ5VTL8 546 aaKnown RBP8.59□□□□□ -1.03
TM9SF3-203ENST00000464654 RSPH6AQ9H0K4 717 aa8.59□□□□□ -1.03
TM9SF3-203ENST00000464654 CD2BP2O95400 341 aaKnown RBP8.58□□□□□ -1.04
TM9SF3-203ENST00000464654 PRR20EP86478 221 aa8.58□□□□□ -1.04
TM9SF3-203ENST00000464654 PRR20CP86479 221 aa8.58□□□□□ -1.04
TM9SF3-203ENST00000464654 PRR20DP86480 221 aa8.58□□□□□ -1.04
TM9SF3-203ENST00000464654 PRR20BP86481 221 aa8.58□□□□□ -1.04
TM9SF3-203ENST00000464654 PRR20AP86496 221 aa8.58□□□□□ -1.04
TM9SF3-203ENST00000464654 DESI1Q6ICB0 168 aa8.58□□□□□ -1.04
TM9SF3-203ENST00000464654 RIC3Q7Z5B4 369 aa8.58□□□□□ -1.04
TM9SF3-203ENST00000464654 SYMPKQ92797 1274 aaKnown RBP8.58□□□□□ -1.04
TM9SF3-203ENST00000464654 GFRA3O60609 400 aa8.57□□□□□ -1.04
TM9SF3-203ENST00000464654 ZNF697Q5TEC3 545 aa8.57□□□□□ -1.04
TM9SF3-203ENST00000464654 MYSM1Q5VVJ2 828 aa8.57□□□□□ -1.04
TM9SF3-203ENST00000464654 PDZRN3Q9UPQ7 1066 aa8.57□□□□□ -1.04
TM9SF3-203ENST00000464654 ZBTB24O43167 697 aaPredicted RBP8.56□□□□□ -1.04
TM9SF3-203ENST00000464654 DDRGK1Q96HY6 314 aa8.56□□□□□ -1.04
TM9SF3-203ENST00000464654 KDM4CQ9H3R0 1056 aa8.56□□□□□ -1.04
TM9SF3-203ENST00000464654 ZNF787Q6DD87 383 aa8.55□□□□□ -1.04
TM9SF3-203ENST00000464654 TRIM67Q6ZTA4 783 aa8.55□□□□□ -1.04
TM9SF3-203ENST00000464654 ZBTB3Q9H5J0 574 aa8.55□□□□□ -1.04
TM9SF3-203ENST00000464654 PTPRNQ16849 979 aa8.54□□□□□ -1.04
TM9SF3-203ENST00000464654 PRR7Q8TB68 274 aa8.54□□□□□ -1.04
TM9SF3-203ENST00000464654 PCDHB15Q9Y5E8 787 aa8.54□□□□□ -1.04
TM9SF3-203ENST00000464654 GDF9O60383 454 aa8.53□□□□□ -1.04
TM9SF3-203ENST00000464654 GPBP1L1Q9HC44 474 aaPredicted RBP8.53□□□□□ -1.04
TM9SF3-203ENST00000464654 HRCP23327 699 aa8.52□□□□□ -1.05
TM9SF3-203ENST00000464654 TRIM32Q13049 653 aa8.52□□□□□ -1.05
TM9SF3-203ENST00000464654 NUDT12Q9BQG2 462 aa8.52□□□□□ -1.05
TM9SF3-203ENST00000464654 LIMD1Q9UGP4 676 aa8.52□□□□□ -1.05
TM9SF3-203ENST00000464654 CCNYL3P0C7X3 344 aa8.51□□□□□ -1.05
TM9SF3-203ENST00000464654 CLK2P49760 499 aaKnown RBP8.51□□□□□ -1.05
TM9SF3-203ENST00000464654 ZNF775Q96BV0 537 aaPredicted RBP8.51□□□□□ -1.05
TM9SF3-203ENST00000464654 LILRB3O75022 631 aa8.5□□□□□ -1.05
TM9SF3-203ENST00000464654 SKIV2LQ15477 1246 aaKnown RBP8.5□□□□□ -1.05
TM9SF3-203ENST00000464654 CCDC24Q8N4L8 307 aa8.5□□□□□ -1.05
TM9SF3-203ENST00000464654 EVA1BQ9NVM1 165 aa8.5□□□□□ -1.05
TM9SF3-203ENST00000464654 PKD2L1Q9P0L9 805 aa8.5□□□□□ -1.05
TM9SF3-203ENST00000464654 WNT7BP56706 349 aa8.49□□□□□ -1.05
TM9SF3-203ENST00000464654 SH3D19Q5HYK7 790 aa8.49□□□□□ -1.05
TM9SF3-203ENST00000464654 LYPD8Q6UX82 237 aa8.49□□□□□ -1.05
TM9SF3-203ENST00000464654 FAM117AQ9C073 453 aa8.49□□□□□ -1.05
TM9SF3-203ENST00000464654 CFAP99D6REC4 459 aa8.48□□□□□ -1.05
TM9SF3-203ENST00000464654 WNT7AO00755 349 aa8.48□□□□□ -1.05
TM9SF3-203ENST00000464654 PLEKHG3A1L390 1219 aa8.47□□□□□ -1.05
TM9SF3-203ENST00000464654 DGAT1O75907 488 aa8.47□□□□□ -1.05
TM9SF3-203ENST00000464654 QPCTQ16769 361 aa8.47□□□□□ -1.05
TM9SF3-203ENST00000464654 CABLES1Q8TDN4 633 aa8.47□□□□□ -1.05
TM9SF3-203ENST00000464654 NUTM2BA6NNL0 878 aaPredicted RBP8.46□□□□□ -1.06
TM9SF3-203ENST00000464654 NUTM2EB1AL46 878 aaPredicted RBP8.46□□□□□ -1.06
TM9SF3-203ENST00000464654 KCNH2Q12809 1159 aa8.46□□□□□ -1.06
TM9SF3-203ENST00000464654 TPRNQ4KMQ1 711 aa8.46□□□□□ -1.06
TM9SF3-203ENST00000464654 NUTM2DQ5VT03 806 aaPredicted RBP8.46□□□□□ -1.06
TM9SF3-203ENST00000464654 NUTM2AQ8IVF1 878 aaPredicted RBP8.46□□□□□ -1.06
TM9SF3-203ENST00000464654 GOPCQ9HD26 462 aa8.46□□□□□ -1.06
TM9SF3-203ENST00000464654 TNFRSF10AO00220 468 aa8.45□□□□□ -1.06
TM9SF3-203ENST00000464654 FOXC1Q12948 553 aa8.45□□□□□ -1.06
TM9SF3-203ENST00000464654 CSPP1Q1MSJ5 1256 aa8.45□□□□□ -1.06
TM9SF3-203ENST00000464654 PTCRAQ6ISU1 281 aaPredicted RBP8.45□□□□□ -1.06
TM9SF3-203ENST00000464654 POLR3EQ9NVU0 708 aa8.45□□□□□ -1.06
TM9SF3-203ENST00000464654 TOR4AQ9NXH8 423 aa8.45□□□□□ -1.06
TM9SF3-203ENST00000464654 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.44□□□□□ -1.06
TM9SF3-203ENST00000464654 NEUROD2Q15784 382 aa8.43□□□□□ -1.06
TM9SF3-203ENST00000464654 PKDCCQ504Y2 493 aa8.43□□□□□ -1.06
TM9SF3-203ENST00000464654 PPP2R2DQ66LE6 453 aa8.43□□□□□ -1.06
TM9SF3-203ENST00000464654 HELBQ8NG08 1087 aaPredicted RBP8.43□□□□□ -1.06
TM9SF3-203ENST00000464654 UNC93B1Q9H1C4 597 aa8.43□□□□□ -1.06
TM9SF3-203ENST00000464654 F12P00748 615 aaPredicted RBP8.42□□□□□ -1.06
TM9SF3-203ENST00000464654 BRPF1P55201 1214 aaPredicted RBP8.42□□□□□ -1.06
TM9SF3-203ENST00000464654 SKOR1P84550 965 aa8.42□□□□□ -1.06
TM9SF3-203ENST00000464654 RTL5Q5HYW3 569 aaPredicted RBP8.42□□□□□ -1.06
TM9SF3-203ENST00000464654 CYP4X1Q8N118 509 aa8.42□□□□□ -1.06
TM9SF3-203ENST00000464654 RC3H1Q5TC82 1133 aaKnown RBP8.41□□□□□ -1.06
TM9SF3-203ENST00000464654 SNIP1Q8TAD8 396 aaKnown RBP8.41□□□□□ -1.06
TM9SF3-203ENST00000464654 MRGPRX2Q96LB1 330 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms