RNA–Protein interactions for RNA: ENST00000463343.1

SF1-212, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 983 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-212ENST00000463343 PIK3C2GO75747 1445 aa25.67■■□□□ 1.7
SF1-212ENST00000463343 PTCH1Q13635 1447 aa25.67■■□□□ 1.7
SF1-212ENST00000463343 C14orf93Q9H972 538 aaKnown RBP25.67■■□□□ 1.7
SF1-212ENST00000463343 MYOM2P54296 1465 aa25.66■■□□□ 1.7
SF1-212ENST00000463343 NRXN1Q9ULB1 1477 aa25.66■■□□□ 1.7
SF1-212ENST00000463343 AFF2P51816 1311 aa25.65■■□□□ 1.7
SF1-212ENST00000463343 CFAP70Q5T0N1 1121 aa25.65■■□□□ 1.7
SF1-212ENST00000463343 PNPLA6Q8IY17 1366 aa25.65■■□□□ 1.7
SF1-212ENST00000463343 NALCNQ8IZF0 1738 aa25.65■■□□□ 1.7
SF1-212ENST00000463343 C1orf167Q5SNV9 1468 aa25.64■■□□□ 1.69
SF1-212ENST00000463343 LAMC1P11047 1609 aa25.63■■□□□ 1.69
SF1-212ENST00000463343 TMEM132EQ6IEE7 984 aa25.63■■□□□ 1.69
SF1-212ENST00000463343 L3MBTL2Q969R5 705 aa25.63■■□□□ 1.69
SF1-212ENST00000463343 SOS2Q07890 1332 aaPredicted RBP25.6■■□□□ 1.69
SF1-212ENST00000463343 ROBO2Q9HCK4 1378 aa25.59■■□□□ 1.69
SF1-212ENST00000463343 DDX17Q92841 729 aaKnown RBP25.59■■□□□ 1.69
SF1-212ENST00000463343 RBM6P78332 1123 aaKnown RBP25.58■■□□□ 1.69
SF1-212ENST00000463343 QTRT2Q9H974 415 aaKnown RBP25.58■■□□□ 1.69
SF1-212ENST00000463343 STK26Q9P289 416 aa25.57■■□□□ 1.68
SF1-212ENST00000463343 C8orf37Q96NL8 207 aa25.56■■□□□ 1.68
SF1-212ENST00000463343 ORAI2Q96SN7 254 aa25.55■■□□□ 1.68
SF1-212ENST00000463343 LRPPRCP42704 1394 aaKnown RBP25.54■■□□□ 1.68
SF1-212ENST00000463343 NGLY1Q96IV0 654 aa25.52■■□□□ 1.68
SF1-212ENST00000463343 ABCC11Q96J66 1382 aa25.52■■□□□ 1.68
SF1-212ENST00000463343 YTHDC2Q9H6S0 1430 aaKnown RBP25.5■■□□□ 1.67
SF1-212ENST00000463343 FNBP4Q8N3X1 1017 aaPredicted RBP25.48■■□□□ 1.67
SF1-212ENST00000463343 RGS12O14924 1447 aa25.47■■□□□ 1.67
SF1-212ENST00000463343 ADAMTS2O95450 1211 aa25.47■■□□□ 1.67
SF1-212ENST00000463343 WAPLQ7Z5K2 1190 aa25.47■■□□□ 1.67
SF1-212ENST00000463343 SIRT1Q96EB6 747 aa25.47■■□□□ 1.67
SF1-212ENST00000463343 TECPR2O15040 1411 aa25.46■■□□□ 1.67
SF1-212ENST00000463343 NPHP3Q7Z494 1330 aa25.46■■□□□ 1.67
SF1-212ENST00000463343 NBPF1Q3BBV0 1214 aa25.45■■□□□ 1.66
SF1-212ENST00000463343 COL22A1Q8NFW1 1626 aaPredicted RBP25.45■■□□□ 1.66
SF1-212ENST00000463343 ADGRB1O14514 1584 aa25.44■■□□□ 1.66
SF1-212ENST00000463343 CDC42BPGQ6DT37 1551 aa25.44■■□□□ 1.66
SF1-212ENST00000463343 CLSPNQ9HAW4 1339 aa25.44■■□□□ 1.66
SF1-212ENST00000463343 TRPC5Q9UL62 973 aaPredicted RBP25.44■■□□□ 1.66
SF1-212ENST00000463343 TONSLQ96HA7 1378 aa25.44■■□□□ 1.66
SF1-212ENST00000463343 CCER1Q8TC90 406 aaPredicted RBP25.43■■□□□ 1.66
SF1-212ENST00000463343 USP21Q9UK80 565 aa25.43■■□□□ 1.66
SF1-212ENST00000463343 ESCO1Q5FWF5 840 aa25.42■■□□□ 1.66
SF1-212ENST00000463343 TRAK1Q9UPV9 953 aa25.42■■□□□ 1.66
SF1-212ENST00000463343 PLEKHH1Q9ULM0 1364 aa25.42■■□□□ 1.66
SF1-212ENST00000463343 NBPF8Q3BBV2 869 aa25.41■■□□□ 1.66
SF1-212ENST00000463343 PRAM1Q96QH2 718 aa25.38■■□□□ 1.65
SF1-212ENST00000463343 PXDNQ92626 1479 aa25.38■■□□□ 1.65
SF1-212ENST00000463343 KNDC1Q76NI1 1749 aa25.37■■□□□ 1.65
SF1-212ENST00000463343 ATRNO75882 1429 aa25.37■■□□□ 1.65
SF1-212ENST00000463343 ATAD2Q6PL18 1390 aa25.36■■□□□ 1.65
SF1-212ENST00000463343 FOXO3O43524 673 aa25.36■■□□□ 1.65
SF1-212ENST00000463343 POGKQ9P215 609 aa25.36■■□□□ 1.65
SF1-212ENST00000463343 KIAA1210Q9ULL0 1709 aa25.35■■□□□ 1.65
SF1-212ENST00000463343 DLC1Q96QB1 1528 aa25.34■■□□□ 1.65
SF1-212ENST00000463343 SAFB2Q14151 953 aaKnown RBP eCLIP25.34■■□□□ 1.65
SF1-212ENST00000463343 TIMELESSQ9UNS1 1208 aa25.31■■□□□ 1.64
SF1-212ENST00000463343 BCL9LQ86UU0 1499 aa25.31■■□□□ 1.64
SF1-212ENST00000463343 MARF1Q9Y4F3 1742 aaKnown RBP25.3■■□□□ 1.64
SF1-212ENST00000463343 CCDC125Q86Z20 511 aa25.3■■□□□ 1.64
SF1-212ENST00000463343 SPATA31A3Q5VYP0 1347 aa25.28■■□□□ 1.64
SF1-212ENST00000463343 TRPM1Q7Z4N2 1603 aa25.26■■□□□ 1.63
SF1-212ENST00000463343 XPCQ01831 940 aaPredicted RBP25.26■■□□□ 1.63
SF1-212ENST00000463343 GJD4Q96KN9 370 aaPredicted RBP25.26■■□□□ 1.63
SF1-212ENST00000463343 ROCK2O75116 1388 aaKnown RBP25.26■■□□□ 1.63
SF1-212ENST00000463343 FMN2Q9NZ56 1722 aa25.26■■□□□ 1.63
SF1-212ENST00000463343 KIF1AQ12756 1690 aa25.24■■□□□ 1.63
SF1-212ENST00000463343 MINK1Q8N4C8 1332 aaPredicted RBP25.24■■□□□ 1.63
SF1-212ENST00000463343 NUTM2FA1L443 756 aa25.24■■□□□ 1.63
SF1-212ENST00000463343 HIRIP3Q9BW71 556 aaPredicted RBP25.23■■□□□ 1.63
SF1-212ENST00000463343 GPRASP1Q5JY77 1395 aa25.22■■□□□ 1.63
SF1-212ENST00000463343 KRT28Q7Z3Y7 464 aa25.22■■□□□ 1.63
SF1-212ENST00000463343 UNC5CLQ8IV45 518 aa25.22■■□□□ 1.63
SF1-212ENST00000463343 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.22■■□□□ 1.63
SF1-212ENST00000463343 SLIT2O94813 1529 aa25.21■■□□□ 1.63
SF1-212ENST00000463343 EP400Q96L91 3159 aa25.21■■□□□ 1.63
SF1-212ENST00000463343 PSME1Q06323 249 aa25.2■■□□□ 1.62
SF1-212ENST00000463343 ARHGEF28Q8N1W1 1705 aaKnown RBP25.2■■□□□ 1.62
SF1-212ENST00000463343 CARD11Q9BXL7 1154 aa25.19■■□□□ 1.62
SF1-212ENST00000463343 RALGAPBQ86X10 1494 aa25.18■■□□□ 1.62
SF1-212ENST00000463343 PHF8Q9UPP1 1060 aa25.18■■□□□ 1.62
SF1-212ENST00000463343 CENPJQ9HC77 1338 aaPredicted RBP25.17■■□□□ 1.62
SF1-212ENST00000463343 SRCAPQ6ZRS2 3230 aa25.17■■□□□ 1.62
SF1-212ENST00000463343 WASLO00401 505 aaPredicted RBP25.17■■□□□ 1.62
SF1-212ENST00000463343 ZRANB1Q9UGI0 708 aa25.16■■□□□ 1.62
SF1-212ENST00000463343 SBNO1A3KN83 1393 aa25.16■■□□□ 1.62
SF1-212ENST00000463343 TNS3Q68CZ2 1445 aa25.13■■□□□ 1.61
SF1-212ENST00000463343 RGPD8O14715 1765 aaPredicted RBP25.13■■□□□ 1.61
SF1-212ENST00000463343 USP32Q8NFA0 1604 aa25.12■■□□□ 1.61
SF1-212ENST00000463343 CDK19Q9BWU1 502 aa25.12■■□□□ 1.61
SF1-212ENST00000463343 ADGRB2O60241 1585 aa25.12■■□□□ 1.61
SF1-212ENST00000463343 ARHGEF10O15013 1369 aa25.11■■□□□ 1.61
SF1-212ENST00000463343 ONECUT3O60422 494 aaPredicted RBP25.11■■□□□ 1.61
SF1-212ENST00000463343 ANKARQ7Z5J8 1434 aa25.11■■□□□ 1.61
SF1-212ENST00000463343 GLI3P10071 1580 aa25.1■■□□□ 1.61
SF1-212ENST00000463343 VPS72Q15906 364 aa25.1■■□□□ 1.61
SF1-212ENST00000463343 PRR36Q9H6K5 1346 aa25.1■■□□□ 1.61
SF1-212ENST00000463343 EIF3AQ14152 1382 aaKnown RBP25.07■■□□□ 1.6
SF1-212ENST00000463343 BLMP54132 1417 aaPredicted RBP25.07■■□□□ 1.6
SF1-212ENST00000463343 HAP1P54257 671 aaPredicted RBP25.07■■□□□ 1.6
SF1-212ENST00000463343 NWD2Q9ULI1 1742 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms