RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 DISP3Q9P2K9 1392 aa20.08■□□□□ 0.8
COL6A1-202ENST00000463060 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.07■□□□□ 0.8
COL6A1-202ENST00000463060 NKTRP30414 1462 aaKnown RBP20.07■□□□□ 0.8
COL6A1-202ENST00000463060 SAFB2Q14151 953 aaKnown RBP eCLIP20.07■□□□□ 0.8
COL6A1-202ENST00000463060 KIF7Q2M1P5 1343 aa20.06■□□□□ 0.8
COL6A1-202ENST00000463060 TMF1P82094 1093 aa20.06■□□□□ 0.8
COL6A1-202ENST00000463060 CCDC7Q96M83 1385 aa20.06■□□□□ 0.8
COL6A1-202ENST00000463060 PUS7Q96PZ0 661 aaKnown RBP20.05■□□□□ 0.8
COL6A1-202ENST00000463060 MINK1Q8N4C8 1332 aaPredicted RBP20.04■□□□□ 0.8
COL6A1-202ENST00000463060 ZNF335Q9H4Z2 1342 aaPredicted RBP20.04■□□□□ 0.8
COL6A1-202ENST00000463060 TULP4Q9NRJ4 1543 aa20.04■□□□□ 0.8
COL6A1-202ENST00000463060 ADGRB2O60241 1585 aa20.02■□□□□ 0.8
COL6A1-202ENST00000463060 NCOA3Q9Y6Q9 1424 aa20.02■□□□□ 0.79
COL6A1-202ENST00000463060 EVC2Q86UK5 1308 aa20.02■□□□□ 0.79
COL6A1-202ENST00000463060 PROSER2Q86WR7 435 aaPredicted RBP20.01■□□□□ 0.79
COL6A1-202ENST00000463060 WASLO00401 505 aaPredicted RBP20■□□□□ 0.79
COL6A1-202ENST00000463060 CDCA8Q53HL2 280 aa19.99■□□□□ 0.79
COL6A1-202ENST00000463060 CDK19Q9BWU1 502 aa19.99■□□□□ 0.79
COL6A1-202ENST00000463060 LRRC7Q96NW7 1537 aa19.98■□□□□ 0.79
COL6A1-202ENST00000463060 RBM33Q96EV2 1170 aaKnown RBP19.98■□□□□ 0.79
COL6A1-202ENST00000463060 ADGRL3Q9HAR2 1447 aa19.98■□□□□ 0.79
COL6A1-202ENST00000463060 TMEM94Q12767 1356 aa19.97■□□□□ 0.79
COL6A1-202ENST00000463060 NALCNQ8IZF0 1738 aa19.96■□□□□ 0.79
COL6A1-202ENST00000463060 LTBP4Q8N2S1 1624 aa19.96■□□□□ 0.79
COL6A1-202ENST00000463060 XIRP1Q702N8 1843 aaKnown RBP19.95■□□□□ 0.78
COL6A1-202ENST00000463060 CABP2Q9NPB3 220 aa19.94■□□□□ 0.78
COL6A1-202ENST00000463060 CDC42BPGQ6DT37 1551 aa19.93■□□□□ 0.78
COL6A1-202ENST00000463060 C19orf44Q9H6X5 657 aa19.93■□□□□ 0.78
COL6A1-202ENST00000463060 PRR36Q9H6K5 1346 aa19.92■□□□□ 0.78
COL6A1-202ENST00000463060 SRPK2P78362 688 aaKnown RBP19.91■□□□□ 0.78
COL6A1-202ENST00000463060 DDX10Q13206 875 aaKnown RBP19.91■□□□□ 0.78
COL6A1-202ENST00000463060 ATAD2Q6PL18 1390 aa19.91■□□□□ 0.78
COL6A1-202ENST00000463060 NUDT16Q96DE0 195 aaKnown RBP19.9■□□□□ 0.78
COL6A1-202ENST00000463060 MYOM1P52179 1685 aa19.9■□□□□ 0.78
COL6A1-202ENST00000463060 FMN2Q9NZ56 1722 aa19.9■□□□□ 0.78
COL6A1-202ENST00000463060 ATP7BP35670 1465 aa19.89■□□□□ 0.77
COL6A1-202ENST00000463060 DCCP43146 1447 aa19.89■□□□□ 0.77
COL6A1-202ENST00000463060 USP32Q8NFA0 1604 aa19.88■□□□□ 0.77
COL6A1-202ENST00000463060 POLR3GLQ9BT43 218 aa19.88■□□□□ 0.77
COL6A1-202ENST00000463060 ANKARQ7Z5J8 1434 aa19.87■□□□□ 0.77
COL6A1-202ENST00000463060 SLC12A5Q9H2X9 1139 aa19.87■□□□□ 0.77
COL6A1-202ENST00000463060 CCDC61Q9Y6R9 512 aa19.87■□□□□ 0.77
COL6A1-202ENST00000463060 NINLQ9Y2I6 1382 aa19.86■□□□□ 0.77
COL6A1-202ENST00000463060 C14orf37Q86TY3 774 aa19.86■□□□□ 0.77
COL6A1-202ENST00000463060 CERKQ8TCT0 537 aa19.85■□□□□ 0.77
COL6A1-202ENST00000463060 CABP1Q9NZU7 370 aa19.85■□□□□ 0.77
COL6A1-202ENST00000463060 PLEKHG3A1L390 1219 aa19.84■□□□□ 0.77
COL6A1-202ENST00000463060 PER1O15534 1290 aaPredicted RBP19.84■□□□□ 0.77
COL6A1-202ENST00000463060 CD163L1Q9NR16 1453 aa19.84■□□□□ 0.77
COL6A1-202ENST00000463060 TOPAZ1Q8N9V7 1692 aa19.84■□□□□ 0.77
COL6A1-202ENST00000463060 MSH6P52701 1360 aa19.83■□□□□ 0.77
COL6A1-202ENST00000463060 PANK3Q9H999 370 aa19.83■□□□□ 0.77
COL6A1-202ENST00000463060 NUTM2FA1L443 756 aa19.82■□□□□ 0.76
COL6A1-202ENST00000463060 CADPS2Q86UW7 1296 aa19.82■□□□□ 0.76
COL6A1-202ENST00000463060 RGPD8O14715 1765 aaPredicted RBP19.82■□□□□ 0.76
COL6A1-202ENST00000463060 ATF3P18847 181 aa19.81■□□□□ 0.76
COL6A1-202ENST00000463060 TMC1Q8TDI8 760 aa19.81■□□□□ 0.76
COL6A1-202ENST00000463060 CARD14Q9BXL6 1004 aa19.81■□□□□ 0.76
COL6A1-202ENST00000463060 MST1RQ04912 1400 aa19.81■□□□□ 0.76
COL6A1-202ENST00000463060 CPSF1Q10570 1443 aaKnown RBP19.81■□□□□ 0.76
COL6A1-202ENST00000463060 PPIP5K1Q6PFW1 1433 aa19.81■□□□□ 0.76
COL6A1-202ENST00000463060 C1orf167Q5SNV9 1468 aa19.79■□□□□ 0.76
COL6A1-202ENST00000463060 ANKRD36BQ8N2N9 1353 aa19.79■□□□□ 0.76
COL6A1-202ENST00000463060 DIEXFQ68CQ4 756 aaKnown RBP19.78■□□□□ 0.76
COL6A1-202ENST00000463060 POLR3AO14802 1390 aaPredicted RBP19.78■□□□□ 0.76
COL6A1-202ENST00000463060 ITSN1Q15811 1721 aa19.77■□□□□ 0.76
COL6A1-202ENST00000463060 A0A1W2PP64 1363 aa19.77■□□□□ 0.76
COL6A1-202ENST00000463060 ORAI2Q96SN7 254 aa19.76■□□□□ 0.75
COL6A1-202ENST00000463060 TERF2IPQ9NYB0 399 aa19.76■□□□□ 0.75
COL6A1-202ENST00000463060 ACEP12821 1306 aa19.76■□□□□ 0.75
COL6A1-202ENST00000463060 ZNF692Q9BU19 519 aaPredicted RBP19.74■□□□□ 0.75
COL6A1-202ENST00000463060 SLAIN2Q9P270 581 aa19.74■□□□□ 0.75
COL6A1-202ENST00000463060 PHF8Q9UPP1 1060 aa19.74■□□□□ 0.75
COL6A1-202ENST00000463060 AKAP12Q02952 1782 aa19.73■□□□□ 0.75
COL6A1-202ENST00000463060 ESCO1Q5FWF5 840 aa19.73■□□□□ 0.75
COL6A1-202ENST00000463060 PMFBP1Q8TBY8 1022 aa19.73■□□□□ 0.75
COL6A1-202ENST00000463060 IQSEC2Q5JU85 1478 aa19.73■□□□□ 0.75
COL6A1-202ENST00000463060 HDGFL2Q7Z4V5 671 aaPredicted RBP19.72■□□□□ 0.75
COL6A1-202ENST00000463060 SSH2Q76I76 1423 aa19.71■□□□□ 0.75
COL6A1-202ENST00000463060 AMER1Q5JTC6 1135 aaPredicted RBP19.71■□□□□ 0.75
COL6A1-202ENST00000463060 MON2Q7Z3U7 1717 aa19.7■□□□□ 0.74
COL6A1-202ENST00000463060 KTN1Q86UP2 1357 aaKnown RBP19.7■□□□□ 0.74
COL6A1-202ENST00000463060 NPC1L1Q9UHC9 1359 aa19.7■□□□□ 0.74
COL6A1-202ENST00000463060 NSD3Q9BZ95 1437 aa19.69■□□□□ 0.74
COL6A1-202ENST00000463060 KNSTRNQ9Y448 316 aa19.69■□□□□ 0.74
COL6A1-202ENST00000463060 USP6P35125 1406 aa19.68■□□□□ 0.74
COL6A1-202ENST00000463060 EDC4Q6P2E9 1401 aaKnown RBP19.68■□□□□ 0.74
COL6A1-202ENST00000463060 BRINP3Q76B58 766 aa19.68■□□□□ 0.74
COL6A1-202ENST00000463060 NGDNQ8NEJ9 315 aaKnown RBP19.68■□□□□ 0.74
COL6A1-202ENST00000463060 KIF1AQ12756 1690 aa19.68■□□□□ 0.74
COL6A1-202ENST00000463060 BRD4O60885 1362 aaPredicted RBP19.66■□□□□ 0.74
COL6A1-202ENST00000463060 NRKQ7Z2Y5 1582 aa19.66■□□□□ 0.74
COL6A1-202ENST00000463060 FYB1O15117 783 aa19.65■□□□□ 0.74
COL6A1-202ENST00000463060 FOXO3O43524 673 aa19.65■□□□□ 0.74
COL6A1-202ENST00000463060 TTC21BQ7Z4L5 1316 aa19.64■□□□□ 0.73
COL6A1-202ENST00000463060 CGNL1Q0VF96 1302 aa19.63■□□□□ 0.73
COL6A1-202ENST00000463060 PSME1Q06323 249 aa19.62■□□□□ 0.73
COL6A1-202ENST00000463060 PRKRIP1Q9H875 184 aaPredicted RBP19.62■□□□□ 0.73
COL6A1-202ENST00000463060 TTC21AQ8NDW8 1320 aa19.61■□□□□ 0.73
COL6A1-202ENST00000463060 TOM1O60784 492 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms