RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 CFTRP13569 1480 aa19.11■□□□□ 0.65
SMC4-204ENST00000462787 NAIPQ13075 1403 aa19.11■□□□□ 0.65
SMC4-204ENST00000462787 SCAPERQ9BY12 1400 aa19.11■□□□□ 0.65
SMC4-204ENST00000462787 CCDC70Q6NSX1 233 aa19.1■□□□□ 0.65
SMC4-204ENST00000462787 ACBD3Q9H3P7 528 aa19.1■□□□□ 0.65
SMC4-204ENST00000462787 NEK4P51957 841 aa19.09■□□□□ 0.65
SMC4-204ENST00000462787 EHBP1L1Q8N3D4 1523 aa19.09■□□□□ 0.65
SMC4-204ENST00000462787 RNF20Q5VTR2 975 aa19.09■□□□□ 0.65
SMC4-204ENST00000462787 TRIM5Q9C035 493 aa19.09■□□□□ 0.65
SMC4-204ENST00000462787 TBC1D2Q9BYX2 928 aa19.09■□□□□ 0.65
SMC4-204ENST00000462787 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.08■□□□□ 0.656e-65■■■■■ 143.5
SMC4-204ENST00000462787 CCDC73Q6ZRK6 1079 aa19.08■□□□□ 0.65
SMC4-204ENST00000462787 MAP3K1Q13233 1512 aa19.08■□□□□ 0.64
SMC4-204ENST00000462787 PDCL2Q8N4E4 241 aa19.07■□□□□ 0.64
SMC4-204ENST00000462787 NAT10Q9H0A0 1025 aaKnown RBP19.07■□□□□ 0.64
SMC4-204ENST00000462787 TSR1Q2NL82 804 aaKnown RBP19.06■□□□□ 0.64
SMC4-204ENST00000462787 MCM5P33992 734 aa19.06■□□□□ 0.64
SMC4-204ENST00000462787 EXOSC9Q06265 439 aaKnown RBP19.06■□□□□ 0.64
SMC4-204ENST00000462787 CCDC112Q8NEF3 446 aa19.06■□□□□ 0.64
SMC4-204ENST00000462787 C20orf194Q5TEA3 1177 aa19.06■□□□□ 0.64
SMC4-204ENST00000462787 HSP90B2PQ58FF3 399 aa19.05■□□□□ 0.64
SMC4-204ENST00000462787 WDR33Q9C0J8 1336 aaKnown RBP19.05■□□□□ 0.64
SMC4-204ENST00000462787 CHD1LQ86WJ1 897 aa19.05■□□□□ 0.64
SMC4-204ENST00000462787 SKAP1Q86WV1 359 aa19.05■□□□□ 0.64
SMC4-204ENST00000462787 FANCD2Q9BXW9 1451 aa19.04■□□□□ 0.64
SMC4-204ENST00000462787 CCDC192P0DO97 292 aa19.04■□□□□ 0.64
SMC4-204ENST00000462787 TOP2BQ02880 1626 aa19.04■□□□□ 0.64
SMC4-204ENST00000462787 MTHFSP49914 203 aa19.03■□□□□ 0.64
SMC4-204ENST00000462787 GORABQ5T7V8 394 aa19.03■□□□□ 0.64
SMC4-204ENST00000462787 CCP110O43303 1012 aa19.03■□□□□ 0.64
SMC4-204ENST00000462787 ATF7IPQ6VMQ6 1270 aa19.03■□□□□ 0.64
SMC4-204ENST00000462787 VGFO15240 615 aaPredicted RBP19.03■□□□□ 0.64
SMC4-204ENST00000462787 DHX8Q14562 1220 aaKnown RBP19.03■□□□□ 0.64
SMC4-204ENST00000462787 LMOD2Q6P5Q4 547 aa19.03■□□□□ 0.64
SMC4-204ENST00000462787 ERCC6Q03468 1493 aa19.03■□□□□ 0.64
SMC4-204ENST00000462787 A0A0G2JS52 829 aa19.02■□□□□ 0.64
SMC4-204ENST00000462787 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.02■□□□□ 0.64
SMC4-204ENST00000462787 NOB1Q9ULX3 412 aaKnown RBP19.02■□□□□ 0.64
SMC4-204ENST00000462787 HSP90AB4PQ58FF6 505 aa19.02■□□□□ 0.64
SMC4-204ENST00000462787 ERBINQ96RT1 1412 aa19.02■□□□□ 0.63
SMC4-204ENST00000462787 JPH4Q96JJ6 628 aa19.01■□□□□ 0.63
SMC4-204ENST00000462787 PDCP20941 246 aa19.01■□□□□ 0.63
SMC4-204ENST00000462787 NBPF1Q3BBV0 1214 aa19.01■□□□□ 0.63
SMC4-204ENST00000462787 COG3Q96JB2 828 aa19.01■□□□□ 0.63
SMC4-204ENST00000462787 ERC2O15083 957 aa19.01■□□□□ 0.63
SMC4-204ENST00000462787 DYNC1I1O14576 645 aa19.01■□□□□ 0.63
SMC4-204ENST00000462787 XRCC6P12956 609 aaKnown RBP eCLIP19■□□□□ 0.63
SMC4-204ENST00000462787 HOOK1Q9UJC3 728 aaKnown RBP19■□□□□ 0.63
SMC4-204ENST00000462787 CREBRFQ8IUR6 639 aa19■□□□□ 0.63
SMC4-204ENST00000462787 SPC24Q8NBT2 197 aa19■□□□□ 0.63
SMC4-204ENST00000462787 TNPO1Q92973 898 aaKnown RBP19■□□□□ 0.63
SMC4-204ENST00000462787 IFIT2P09913 472 aaKnown RBP18.99■□□□□ 0.63
SMC4-204ENST00000462787 LRPPRCP42704 1394 aaKnown RBP18.99■□□□□ 0.63
SMC4-204ENST00000462787 TBC1D32Q96NH3 1257 aa18.99■□□□□ 0.63
SMC4-204ENST00000462787 FIBPO43427 364 aa18.98■□□□□ 0.63
SMC4-204ENST00000462787 CPLX2Q6PUV4 134 aaKnown RBP18.98■□□□□ 0.63
SMC4-204ENST00000462787 NKTRP30414 1462 aaKnown RBP18.98■□□□□ 0.63
SMC4-204ENST00000462787 GAPVD1Q14C86 1478 aa18.98■□□□□ 0.63
SMC4-204ENST00000462787 ANKRD30BQ9BXX2 1392 aa18.98■□□□□ 0.63
SMC4-204ENST00000462787 XPCQ01831 940 aaPredicted RBP18.97■□□□□ 0.63
SMC4-204ENST00000462787 TULP1O00294 542 aaPredicted RBP18.97■□□□□ 0.63
SMC4-204ENST00000462787 PSMA5P28066 241 aa18.97■□□□□ 0.63
SMC4-204ENST00000462787 MAPKBP1O60336 1514 aa18.97■□□□□ 0.63
SMC4-204ENST00000462787 CCDC27Q2M243 656 aa18.97■□□□□ 0.63
SMC4-204ENST00000462787 ERCC4Q92889 916 aaPredicted RBP18.97■□□□□ 0.63
SMC4-204ENST00000462787 SYCE3A1L190 88 aa18.96■□□□□ 0.63
SMC4-204ENST00000462787 AMPHP49418 695 aa18.96■□□□□ 0.63
SMC4-204ENST00000462787 AK7Q96M32 723 aa18.96■□□□□ 0.63
SMC4-204ENST00000462787 IPO7O95373 1038 aaKnown RBP18.96■□□□□ 0.63
SMC4-204ENST00000462787 AEBP1Q8IUX7 1158 aa18.96■□□□□ 0.63
SMC4-204ENST00000462787 LEKR1Q6ZMV7 388 aa18.96■□□□□ 0.63
SMC4-204ENST00000462787 WWC1Q8IX03 1113 aa18.95■□□□□ 0.62
SMC4-204ENST00000462787 RASSF8Q8NHQ8 419 aa18.95■□□□□ 0.62
SMC4-204ENST00000462787 NUTM2DQ5VT03 806 aaPredicted RBP18.95■□□□□ 0.62
SMC4-204ENST00000462787 ANKRD20A12PQ8NF67 263 aa18.95■□□□□ 0.62
SMC4-204ENST00000462787 FKBP5Q13451 457 aaPredicted RBP18.95■□□□□ 0.62
SMC4-204ENST00000462787 PRDM10Q9NQV6 1147 aa18.94■□□□□ 0.62
SMC4-204ENST00000462787 LRRFIP1Q32MZ4 808 aaKnown RBP18.94■□□□□ 0.62
SMC4-204ENST00000462787 CNTROBQ8N137 903 aa18.94■□□□□ 0.62
SMC4-204ENST00000462787 SDF4Q9BRK5 362 aa18.94■□□□□ 0.62
SMC4-204ENST00000462787 CBX1P83916 185 aa18.94■□□□□ 0.62
SMC4-204ENST00000462787 DUSP27Q5VZP5 1158 aa18.94■□□□□ 0.62
SMC4-204ENST00000462787 TSR2Q969E8 191 aaKnown RBP18.94■□□□□ 0.62
SMC4-204ENST00000462787 ZNF428Q96B54 188 aa18.94■□□□□ 0.62
SMC4-204ENST00000462787 MPNDQ8N594 471 aa18.93■□□□□ 0.62
SMC4-204ENST00000462787 DAPK1P53355 1430 aa18.93■□□□□ 0.62
SMC4-204ENST00000462787 SUPT6HQ7KZ85 1726 aaKnown RBP18.93■□□□□ 0.62
SMC4-204ENST00000462787 KINO60870 393 aaKnown RBP18.93■□□□□ 0.62
SMC4-204ENST00000462787 KLHL40Q2TBA0 621 aa18.93■□□□□ 0.62
SMC4-204ENST00000462787 BCL11BQ9C0K0 894 aaPredicted RBP18.93■□□□□ 0.62
SMC4-204ENST00000462787 C1orf115Q9H7X2 142 aa18.93■□□□□ 0.62
SMC4-204ENST00000462787 GNAI3P08754 354 aa18.92■□□□□ 0.62
SMC4-204ENST00000462787 TSPYL1Q9H0U9 437 aa18.92■□□□□ 0.62
SMC4-204ENST00000462787 RAD54L2Q9Y4B4 1467 aa18.92■□□□□ 0.62
SMC4-204ENST00000462787 PES1O00541 588 aaKnown RBP18.92■□□□□ 0.62
SMC4-204ENST00000462787 CPLX1O14810 134 aa18.92■□□□□ 0.62
SMC4-204ENST00000462787 TRIM29Q14134 588 aa18.91■□□□□ 0.62
SMC4-204ENST00000462787 RARSP54136 660 aaKnown RBP18.91■□□□□ 0.62
SMC4-204ENST00000462787 C8orf34Q49A92 452 aa18.91■□□□□ 0.62
SMC4-204ENST00000462787 PRIMPOLQ96LW4 560 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms