RNA–Protein interactions for RNA: ENST00000462743.1

HPS1-206, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-206ENST00000462743 TRAK1Q9UPV9 953 aa17.38■□□□□ 0.37
HPS1-206ENST00000462743 BRINP3Q76B58 766 aa17.37■□□□□ 0.37
HPS1-206ENST00000462743 PRAM1Q96QH2 718 aa17.37■□□□□ 0.37
HPS1-206ENST00000462743 POGKQ9P215 609 aa17.36■□□□□ 0.37
HPS1-206ENST00000462743 TIMELESSQ9UNS1 1208 aa17.35■□□□□ 0.37
HPS1-206ENST00000462743 C1orf167Q5SNV9 1468 aa17.35■□□□□ 0.37
HPS1-206ENST00000462743 CDC42BPGQ6DT37 1551 aa17.35■□□□□ 0.37
HPS1-206ENST00000462743 TONSLQ96HA7 1378 aa17.33■□□□□ 0.36
HPS1-206ENST00000462743 NBPF8Q3BBV2 869 aa17.33■□□□□ 0.36
HPS1-206ENST00000462743 AHDC1Q5TGY3 1603 aaPredicted RBP17.31■□□□□ 0.36
HPS1-206ENST00000462743 ORAI2Q96SN7 254 aa17.3■□□□□ 0.36
HPS1-206ENST00000462743 GPRASP1Q5JY77 1395 aa17.29■□□□□ 0.36
HPS1-206ENST00000462743 TRPM1Q7Z4N2 1603 aa17.29■□□□□ 0.36
HPS1-206ENST00000462743 SAFB2Q14151 953 aaKnown RBP eCLIP17.29■□□□□ 0.36
HPS1-206ENST00000462743 ARHGEF28Q8N1W1 1705 aaKnown RBP17.29■□□□□ 0.36
HPS1-206ENST00000462743 FMN2Q9NZ56 1722 aa17.28■□□□□ 0.36
HPS1-206ENST00000462743 ADGRB2O60241 1585 aa17.28■□□□□ 0.36
HPS1-206ENST00000462743 PHLPP1O60346 1717 aa17.27■□□□□ 0.36
HPS1-206ENST00000462743 WASLO00401 505 aaPredicted RBP17.27■□□□□ 0.36
HPS1-206ENST00000462743 ESCO1Q5FWF5 840 aa17.26■□□□□ 0.35
HPS1-206ENST00000462743 COL16A1Q07092 1604 aaPredicted RBP17.25■□□□□ 0.35
HPS1-206ENST00000462743 NHSL1Q5SYE7 1610 aa17.25■□□□□ 0.35
HPS1-206ENST00000462743 SOS2Q07890 1332 aaPredicted RBP17.25■□□□□ 0.35
HPS1-206ENST00000462743 MINK1Q8N4C8 1332 aaPredicted RBP17.25■□□□□ 0.35
HPS1-206ENST00000462743 ANKARQ7Z5J8 1434 aa17.25■□□□□ 0.35
HPS1-206ENST00000462743 LRRC59Q96AG4 307 aaKnown RBP17.25■□□□□ 0.35
HPS1-206ENST00000462743 ROCK2O75116 1388 aaKnown RBP17.25■□□□□ 0.35
HPS1-206ENST00000462743 JCADQ9P266 1359 aa17.25■□□□□ 0.35
HPS1-206ENST00000462743 EIF3AQ14152 1382 aaKnown RBP17.24■□□□□ 0.35
HPS1-206ENST00000462743 CENPJQ9HC77 1338 aaPredicted RBP17.23■□□□□ 0.35
HPS1-206ENST00000462743 NUTM2FA1L443 756 aa17.23■□□□□ 0.35
HPS1-206ENST00000462743 CCER1Q8TC90 406 aaPredicted RBP17.23■□□□□ 0.35
HPS1-206ENST00000462743 DDX17Q92841 729 aaKnown RBP17.22■□□□□ 0.35
HPS1-206ENST00000462743 HIRIP3Q9BW71 556 aaPredicted RBP17.22■□□□□ 0.35
HPS1-206ENST00000462743 RALGAPBQ86X10 1494 aa17.22■□□□□ 0.35
HPS1-206ENST00000462743 RGPD8O14715 1765 aaPredicted RBP17.22■□□□□ 0.35
HPS1-206ENST00000462743 NPHP3Q7Z494 1330 aa17.21■□□□□ 0.35
HPS1-206ENST00000462743 PHF8Q9UPP1 1060 aa17.21■□□□□ 0.35
HPS1-206ENST00000462743 FOXO3O43524 673 aa17.2■□□□□ 0.34
HPS1-206ENST00000462743 CDK19Q9BWU1 502 aa17.2■□□□□ 0.34
HPS1-206ENST00000462743 CARD11Q9BXL7 1154 aa17.2■□□□□ 0.34
HPS1-206ENST00000462743 PRR36Q9H6K5 1346 aa17.2■□□□□ 0.34
HPS1-206ENST00000462743 TULP4Q9NRJ4 1543 aa17.19■□□□□ 0.34
HPS1-206ENST00000462743 SPATA31A6Q5VVP1 1343 aa17.19■□□□□ 0.34
HPS1-206ENST00000462743 USP32Q8NFA0 1604 aa17.18■□□□□ 0.34
HPS1-206ENST00000462743 KIF1AQ12756 1690 aa17.18■□□□□ 0.34
HPS1-206ENST00000462743 NUDT16Q96DE0 195 aaKnown RBP17.18■□□□□ 0.34
HPS1-206ENST00000462743 SHPRHQ149N8 1683 aa17.16■□□□□ 0.34
HPS1-206ENST00000462743 CCDC61Q9Y6R9 512 aa17.16■□□□□ 0.34
HPS1-206ENST00000462743 PXDNQ92626 1479 aa17.16■□□□□ 0.34
HPS1-206ENST00000462743 SBNO2Q9Y2G9 1366 aa17.15■□□□□ 0.34
HPS1-206ENST00000462743 KRT28Q7Z3Y7 464 aa17.15■□□□□ 0.34
HPS1-206ENST00000462743 MED1Q15648 1581 aaPredicted RBP17.15■□□□□ 0.34
HPS1-206ENST00000462743 PNPLA6Q8IY17 1366 aa17.15■□□□□ 0.34
HPS1-206ENST00000462743 PLEKHG3A1L390 1219 aa17.14■□□□□ 0.33
HPS1-206ENST00000462743 PSME1Q06323 249 aa17.14■□□□□ 0.33
HPS1-206ENST00000462743 DISP3Q9P2K9 1392 aa17.14■□□□□ 0.33
HPS1-206ENST00000462743 SLC24A1O60721 1099 aa17.13■□□□□ 0.33
HPS1-206ENST00000462743 PMFBP1Q8TBY8 1022 aa17.13■□□□□ 0.33
HPS1-206ENST00000462743 EVC2Q86UK5 1308 aa17.13■□□□□ 0.33
HPS1-206ENST00000462743 QRICH2Q9H0J4 1663 aa17.13■□□□□ 0.33
HPS1-206ENST00000462743 ATP7BP35670 1465 aa17.12■□□□□ 0.33
HPS1-206ENST00000462743 SPATA31A3Q5VYP0 1347 aa17.12■□□□□ 0.33
HPS1-206ENST00000462743 SBNO1A3KN83 1393 aa17.12■□□□□ 0.33
HPS1-206ENST00000462743 PUS7Q96PZ0 661 aaKnown RBP17.11■□□□□ 0.33
HPS1-206ENST00000462743 SRPK2P78362 688 aaKnown RBP17.1■□□□□ 0.33
HPS1-206ENST00000462743 XPCQ01831 940 aaPredicted RBP17.1■□□□□ 0.33
HPS1-206ENST00000462743 CABP2Q9NPB3 220 aa17.1■□□□□ 0.33
HPS1-206ENST00000462743 ITSN1Q15811 1721 aa17.1■□□□□ 0.33
HPS1-206ENST00000462743 NGDNQ8NEJ9 315 aaKnown RBP17.09■□□□□ 0.33
HPS1-206ENST00000462743 POLR3AO14802 1390 aaPredicted RBP17.09■□□□□ 0.33
HPS1-206ENST00000462743 TESK2Q96S53 571 aa17.08■□□□□ 0.32
HPS1-206ENST00000462743 ST20-MTHFSA0A0A6YYL1 179 aa17.07■□□□□ 0.32
HPS1-206ENST00000462743 RGS17Q9UGC6 210 aaPredicted RBP17.07■□□□□ 0.32
HPS1-206ENST00000462743 TOPAZ1Q8N9V7 1692 aa17.07■□□□□ 0.32
HPS1-206ENST00000462743 COL22A1Q8NFW1 1626 aaPredicted RBP17.07■□□□□ 0.32
HPS1-206ENST00000462743 ACEP12821 1306 aa17.06■□□□□ 0.32
HPS1-206ENST00000462743 LRP6O75581 1613 aa17.06■□□□□ 0.32
HPS1-206ENST00000462743 TNS3Q68CZ2 1445 aa17.05■□□□□ 0.32
HPS1-206ENST00000462743 BRD4O60885 1362 aaPredicted RBP17.05■□□□□ 0.32
HPS1-206ENST00000462743 PHF23Q9BUL5 403 aaPredicted RBP17.05■□□□□ 0.32
HPS1-206ENST00000462743 NUTM2BA6NNL0 878 aaPredicted RBP17.04■□□□□ 0.32
HPS1-206ENST00000462743 NUTM2EB1AL46 878 aaPredicted RBP17.04■□□□□ 0.32
HPS1-206ENST00000462743 NUTM2AQ8IVF1 878 aaPredicted RBP17.04■□□□□ 0.32
HPS1-206ENST00000462743 CABP1Q9NZU7 370 aa17.04■□□□□ 0.32
HPS1-206ENST00000462743 PPIP5K1Q6PFW1 1433 aa17.04■□□□□ 0.32
HPS1-206ENST00000462743 ARHGEF10O15013 1369 aa17.03■□□□□ 0.32
HPS1-206ENST00000462743 ATAD2Q6PL18 1390 aa17.03■□□□□ 0.32
HPS1-206ENST00000462743 ZNF692Q9BU19 519 aaPredicted RBP17.03■□□□□ 0.32
HPS1-206ENST00000462743 TRPM3Q9HCF6 1732 aaPredicted RBP17.03■□□□□ 0.32
HPS1-206ENST00000462743 USP47Q96K76 1375 aa17.02■□□□□ 0.32
HPS1-206ENST00000462743 MEX3CQ5U5Q3 659 aaKnown RBP17.01■□□□□ 0.31
HPS1-206ENST00000462743 ALS2Q96Q42 1657 aa17■□□□□ 0.31
HPS1-206ENST00000462743 ZNF772Q68DY9 489 aaPredicted RBP16.99■□□□□ 0.31
HPS1-206ENST00000462743 ILDR2Q71H61 639 aa16.98■□□□□ 0.31
HPS1-206ENST00000462743 FNBP4Q8N3X1 1017 aaPredicted RBP16.98■□□□□ 0.31
HPS1-206ENST00000462743 CPSF1Q10570 1443 aaKnown RBP16.97■□□□□ 0.31
HPS1-206ENST00000462743 SSH2Q76I76 1423 aa16.97■□□□□ 0.31
HPS1-206ENST00000462743 ADAMTS2O95450 1211 aa16.97■□□□□ 0.31
HPS1-206ENST00000462743 LMOD2Q6P5Q4 547 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms