RNA–Protein interactions for RNA: ENST00000462723.1

RPA3-205, Transcript of replication protein A3, humanhuman

TSL 2

Gene RPA3, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-205ENST00000462723 RALGAPBQ86X10 1494 aa11.57□□□□□ -0.56
RPA3-205ENST00000462723 IFT172Q9UG01 1749 aa11.57□□□□□ -0.56
RPA3-205ENST00000462723 RPGRIP1LQ68CZ1 1315 aa11.57□□□□□ -0.56
RPA3-205ENST00000462723 PLCG2P16885 1265 aa11.56□□□□□ -0.56
RPA3-205ENST00000462723 IDI1Q13907 227 aa11.56□□□□□ -0.56
RPA3-205ENST00000462723 MIER1Q8N108 512 aa11.56□□□□□ -0.56
RPA3-205ENST00000462723 MYOM2P54296 1465 aa11.56□□□□□ -0.56
RPA3-205ENST00000462723 EIF4G2P78344 907 aaKnown RBP eCLIP11.55□□□□□ -0.56
RPA3-205ENST00000462723 TRPM1Q7Z4N2 1603 aa11.55□□□□□ -0.56
RPA3-205ENST00000462723 MADDQ8WXG6 1647 aa11.55□□□□□ -0.56
RPA3-205ENST00000462723 PPLO60437 1756 aa11.54□□□□□ -0.56
RPA3-205ENST00000462723 TMEM131LA2VDJ0 1609 aa11.54□□□□□ -0.56
RPA3-205ENST00000462723 AMER1Q5JTC6 1135 aaPredicted RBP11.54□□□□□ -0.56
RPA3-205ENST00000462723 FBXO3Q9UK99 471 aa11.54□□□□□ -0.56
RPA3-205ENST00000462723 C3P01024 1663 aa11.54□□□□□ -0.56
RPA3-205ENST00000462723 TNRQ92752 1358 aa11.54□□□□□ -0.56
RPA3-205ENST00000462723 MYO5BQ9ULV0 1848 aa11.53□□□□□ -0.56
RPA3-205ENST00000462723 ROCK2O75116 1388 aaKnown RBP11.53□□□□□ -0.56
RPA3-205ENST00000462723 KIAA1210Q9ULL0 1709 aa11.52□□□□□ -0.56
RPA3-205ENST00000462723 SNPHO15079 494 aa11.52□□□□□ -0.57
RPA3-205ENST00000462723 MARVELD3Q96A59 401 aa11.52□□□□□ -0.57
RPA3-205ENST00000462723 TMEM106CQ9BVX2 250 aa11.52□□□□□ -0.57
RPA3-205ENST00000462723 CARD11Q9BXL7 1154 aa11.52□□□□□ -0.57
RPA3-205ENST00000462723 LAMC1P11047 1609 aa11.52□□□□□ -0.57
RPA3-205ENST00000462723 ADAMTSL3P82987 1691 aa11.52□□□□□ -0.57
RPA3-205ENST00000462723 RIMS1Q86UR5 1692 aaKnown RBP11.52□□□□□ -0.57
RPA3-205ENST00000462723 HSPA5P11021 654 aaKnown RBP11.51□□□□□ -0.57
RPA3-205ENST00000462723 IRX5P78411 483 aaPredicted RBP11.51□□□□□ -0.57
RPA3-205ENST00000462723 IFNL1Q8IU54 200 aa11.51□□□□□ -0.57
RPA3-205ENST00000462723 NRXN1Q9ULB1 1477 aa11.51□□□□□ -0.57
RPA3-205ENST00000462723 NEXMIFQ5QGS0 1516 aa11.5□□□□□ -0.57
RPA3-205ENST00000462723 KDM5AP29375 1690 aaKnown RBP11.5□□□□□ -0.57
RPA3-205ENST00000462723 VGFO15240 615 aaPredicted RBP11.5□□□□□ -0.57
RPA3-205ENST00000462723 GPRASP1Q5JY77 1395 aa11.5□□□□□ -0.57
RPA3-205ENST00000462723 USP47Q96K76 1375 aa11.5□□□□□ -0.57
RPA3-205ENST00000462723 NLRP1Q9C000 1473 aa11.5□□□□□ -0.57
RPA3-205ENST00000462723 CEBPAP49715 358 aaPredicted RBP11.49□□□□□ -0.57
RPA3-205ENST00000462723 HIRIP3Q9BW71 556 aaPredicted RBP11.49□□□□□ -0.57
RPA3-205ENST00000462723 ADGRF5Q8IZF2 1346 aa11.49□□□□□ -0.57
RPA3-205ENST00000462723 ZFYVE9O95405 1425 aa11.49□□□□□ -0.57
RPA3-205ENST00000462723 A2ML1A8K2U0 1454 aa11.49□□□□□ -0.57
RPA3-205ENST00000462723 PIK3C2GO75747 1445 aa11.47□□□□□ -0.57
RPA3-205ENST00000462723 NBPF1Q3BBV0 1214 aa11.47□□□□□ -0.57
RPA3-205ENST00000462723 DIEXFQ68CQ4 756 aaKnown RBP11.47□□□□□ -0.57
RPA3-205ENST00000462723 UBR1Q8IWV7 1749 aa11.46□□□□□ -0.57
RPA3-205ENST00000462723 HDGFP51858 240 aaKnown RBP11.45□□□□□ -0.58
RPA3-205ENST00000462723 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.45□□□□□ -0.58
RPA3-205ENST00000462723 OCEL1Q9H607 264 aa11.45□□□□□ -0.58
RPA3-205ENST00000462723 MYO3AQ8NEV4 1616 aa11.45□□□□□ -0.58
RPA3-205ENST00000462723 SETBP1Q9Y6X0 1596 aa11.45□□□□□ -0.58
RPA3-205ENST00000462723 RIMS2Q9UQ26 1411 aa11.44□□□□□ -0.58
RPA3-205ENST00000462723 IQGAP1P46940 1657 aa11.44□□□□□ -0.58
RPA3-205ENST00000462723 CFAP70Q5T0N1 1121 aa11.44□□□□□ -0.58
RPA3-205ENST00000462723 NUTM2DQ5VT03 806 aaPredicted RBP11.44□□□□□ -0.58
RPA3-205ENST00000462723 C14orf93Q9H972 538 aaKnown RBP11.44□□□□□ -0.58
RPA3-205ENST00000462723 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.44□□□□□ -0.58
RPA3-205ENST00000462723 SCAF11Q99590 1463 aaKnown RBP11.44□□□□□ -0.58
RPA3-205ENST00000462723 POLR1AO95602 1720 aaPredicted RBP11.43□□□□□ -0.58
RPA3-205ENST00000462723 SETD1BQ9UPS6 1966 aaKnown RBP11.43□□□□□ -0.58
RPA3-205ENST00000462723 EIF3AQ14152 1382 aaKnown RBP11.42□□□□□ -0.58
RPA3-205ENST00000462723 ST20-MTHFSA0A0A6YYL1 179 aa11.42□□□□□ -0.58
RPA3-205ENST00000462723 TMEM2Q9UHN6 1383 aa11.41□□□□□ -0.58
RPA3-205ENST00000462723 NUBP1P53384 320 aa11.41□□□□□ -0.58
RPA3-205ENST00000462723 RTN4Q9NQC3 1192 aaKnown RBP11.41□□□□□ -0.58
RPA3-205ENST00000462723 CEP170BQ9Y4F5 1589 aaPredicted RBP11.41□□□□□ -0.58
RPA3-205ENST00000462723 PTPRMP28827 1452 aa11.4□□□□□ -0.58
RPA3-205ENST00000462723 THEMISQ8N1K5 641 aaPredicted RBP11.4□□□□□ -0.58
RPA3-205ENST00000462723 ADGRB1O14514 1584 aa11.4□□□□□ -0.58
RPA3-205ENST00000462723 CCDC7Q96M83 1385 aa11.4□□□□□ -0.59
RPA3-205ENST00000462723 WASHC2AQ641Q2 1341 aa11.39□□□□□ -0.59
RPA3-205ENST00000462723 DDX10Q13206 875 aaKnown RBP11.39□□□□□ -0.59
RPA3-205ENST00000462723 EID1Q9Y6B2 187 aa11.39□□□□□ -0.59
RPA3-205ENST00000462723 ZNF142P52746 1687 aaPredicted RBP11.39□□□□□ -0.59
RPA3-205ENST00000462723 SLIT1O75093 1534 aa11.39□□□□□ -0.59
RPA3-205ENST00000462723 ALKQ9UM73 1620 aa11.38□□□□□ -0.59
RPA3-205ENST00000462723 ARHGAP23Q9P227 1491 aa11.38□□□□□ -0.59
RPA3-205ENST00000462723 KIF7Q2M1P5 1343 aa11.37□□□□□ -0.59
RPA3-205ENST00000462723 SLC24A1O60721 1099 aa11.37□□□□□ -0.59
RPA3-205ENST00000462723 TMEM132EQ6IEE7 984 aa11.37□□□□□ -0.59
RPA3-205ENST00000462723 PLCD3Q8N3E9 789 aa11.37□□□□□ -0.59
RPA3-205ENST00000462723 KRTAP3-3Q9BYR6 98 aa11.37□□□□□ -0.59
RPA3-205ENST00000462723 KRTAP3-2Q9BYR7 98 aa11.37□□□□□ -0.59
RPA3-205ENST00000462723 C11orf95C9JLR9 678 aaPredicted RBP11.36□□□□□ -0.59
RPA3-205ENST00000462723 EMP3P54852 163 aa11.36□□□□□ -0.59
RPA3-205ENST00000462723 TMF1P82094 1093 aa11.36□□□□□ -0.59
RPA3-205ENST00000462723 TXNDC2Q86VQ3 553 aa11.36□□□□□ -0.59
RPA3-205ENST00000462723 BCANQ96GW7 911 aa11.36□□□□□ -0.59
RPA3-205ENST00000462723 NRXN3Q9Y4C0 1643 aa11.35□□□□□ -0.59
RPA3-205ENST00000462723 TESK2Q96S53 571 aa11.35□□□□□ -0.59
RPA3-205ENST00000462723 TRAK1Q9UPV9 953 aa11.35□□□□□ -0.59
RPA3-205ENST00000462723 PLEKHG1Q9ULL1 1385 aa11.35□□□□□ -0.59
RPA3-205ENST00000462723 SETD1AO15047 1707 aaKnown RBP11.35□□□□□ -0.59
RPA3-205ENST00000462723 ASXL1Q8IXJ9 1541 aa11.35□□□□□ -0.59
RPA3-205ENST00000462723 POTEB3A0JP26 581 aa11.34□□□□□ -0.59
RPA3-205ENST00000462723 POTEBQ6S5H4 581 aa11.34□□□□□ -0.59
RPA3-205ENST00000462723 POLR3GLQ9BT43 218 aa11.34□□□□□ -0.59
RPA3-205ENST00000462723 ARHGEF28Q8N1W1 1705 aaKnown RBP11.34□□□□□ -0.59
RPA3-205ENST00000462723 YTHDC2Q9H6S0 1430 aaKnown RBP11.34□□□□□ -0.59
RPA3-205ENST00000462723 CENPJQ9HC77 1338 aaPredicted RBP11.34□□□□□ -0.59
RPA3-205ENST00000462723 SBNO2Q9Y2G9 1366 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms