RNA–Protein interactions for RNA: ENST00000462537.3

CDKN1A-206, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 3

Gene CDKN1A, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-206ENST00000462537 C1orf167Q5SNV9 1468 aa26.79■■□□□ 1.88
CDKN1A-206ENST00000462537 SIRT1Q96EB6 747 aa26.78■■□□□ 1.88
CDKN1A-206ENST00000462537 DLC1Q96QB1 1528 aa26.77■■□□□ 1.88
CDKN1A-206ENST00000462537 SAFB2Q14151 953 aaKnown RBP eCLIP26.76■■□□□ 1.87
CDKN1A-206ENST00000462537 PRAM1Q96QH2 718 aa26.76■■□□□ 1.87
CDKN1A-206ENST00000462537 POGKQ9P215 609 aa26.76■■□□□ 1.87
CDKN1A-206ENST00000462537 TRAK1Q9UPV9 953 aa26.76■■□□□ 1.87
CDKN1A-206ENST00000462537 NHSL1Q5SYE7 1610 aa26.76■■□□□ 1.87
CDKN1A-206ENST00000462537 KIAA1210Q9ULL0 1709 aa26.74■■□□□ 1.87
CDKN1A-206ENST00000462537 JCADQ9P266 1359 aa26.73■■□□□ 1.87
CDKN1A-206ENST00000462537 L3MBTL2Q969R5 705 aa26.72■■□□□ 1.87
CDKN1A-206ENST00000462537 ORAI2Q96SN7 254 aa26.72■■□□□ 1.87
CDKN1A-206ENST00000462537 FMN2Q9NZ56 1722 aa26.72■■□□□ 1.87
CDKN1A-206ENST00000462537 NUTM2FA1L443 756 aa26.71■■□□□ 1.87
CDKN1A-206ENST00000462537 PHF23Q9BUL5 403 aaPredicted RBP26.7■■□□□ 1.86
CDKN1A-206ENST00000462537 DDX17Q92841 729 aaKnown RBP26.69■■□□□ 1.86
CDKN1A-206ENST00000462537 ARHGEF28Q8N1W1 1705 aaKnown RBP26.68■■□□□ 1.86
CDKN1A-206ENST00000462537 ESCO1Q5FWF5 840 aa26.68■■□□□ 1.86
CDKN1A-206ENST00000462537 SHPRHQ149N8 1683 aa26.66■■□□□ 1.86
CDKN1A-206ENST00000462537 MINK1Q8N4C8 1332 aaPredicted RBP26.64■■□□□ 1.85
CDKN1A-206ENST00000462537 ADGRB2O60241 1585 aa26.63■■□□□ 1.85
CDKN1A-206ENST00000462537 NBPF1Q3BBV0 1214 aa26.63■■□□□ 1.85
CDKN1A-206ENST00000462537 HIRIP3Q9BW71 556 aaPredicted RBP26.63■■□□□ 1.85
CDKN1A-206ENST00000462537 LRRC59Q96AG4 307 aaKnown RBP26.62■■□□□ 1.85
CDKN1A-206ENST00000462537 RGPD8O14715 1765 aaPredicted RBP26.61■■□□□ 1.85
CDKN1A-206ENST00000462537 PCGF6Q9BYE7 350 aa26.61■■□□□ 1.85
CDKN1A-206ENST00000462537 TRPM1Q7Z4N2 1603 aa26.6■■□□□ 1.85
CDKN1A-206ENST00000462537 SPATA31A6Q5VVP1 1343 aa26.6■■□□□ 1.85
CDKN1A-206ENST00000462537 TONSLQ96HA7 1378 aa26.59■■□□□ 1.85
CDKN1A-206ENST00000462537 KIF1AQ12756 1690 aa26.59■■□□□ 1.85
CDKN1A-206ENST00000462537 NPHP3Q7Z494 1330 aa26.58■■□□□ 1.85
CDKN1A-206ENST00000462537 ILDR2Q71H61 639 aa26.57■■□□□ 1.84
CDKN1A-206ENST00000462537 FOXO3O43524 673 aa26.56■■□□□ 1.84
CDKN1A-206ENST00000462537 SOS2Q07890 1332 aaPredicted RBP26.56■■□□□ 1.84
CDKN1A-206ENST00000462537 LRP6O75581 1613 aa26.54■■□□□ 1.84
CDKN1A-206ENST00000462537 USP32Q8NFA0 1604 aa26.54■■□□□ 1.84
CDKN1A-206ENST00000462537 NUTM2BA6NNL0 878 aaPredicted RBP26.54■■□□□ 1.84
CDKN1A-206ENST00000462537 NUTM2EB1AL46 878 aaPredicted RBP26.54■■□□□ 1.84
CDKN1A-206ENST00000462537 MEX3CQ5U5Q3 659 aaKnown RBP26.54■■□□□ 1.84
CDKN1A-206ENST00000462537 NUTM2AQ8IVF1 878 aaPredicted RBP26.54■■□□□ 1.84
CDKN1A-206ENST00000462537 EIF3AQ14152 1382 aaKnown RBP26.54■■□□□ 1.84
CDKN1A-206ENST00000462537 PNPLA6Q8IY17 1366 aa26.54■■□□□ 1.84
CDKN1A-206ENST00000462537 XPCQ01831 940 aaPredicted RBP26.53■■□□□ 1.84
CDKN1A-206ENST00000462537 ANKARQ7Z5J8 1434 aa26.53■■□□□ 1.84
CDKN1A-206ENST00000462537 WASLO00401 505 aaPredicted RBP26.52■■□□□ 1.84
CDKN1A-206ENST00000462537 ROCK2O75116 1388 aaKnown RBP26.52■■□□□ 1.84
CDKN1A-206ENST00000462537 PXDNQ92626 1479 aa26.52■■□□□ 1.84
CDKN1A-206ENST00000462537 PHF8Q9UPP1 1060 aa26.52■■□□□ 1.84
CDKN1A-206ENST00000462537 TULP4Q9NRJ4 1543 aa26.51■■□□□ 1.83
CDKN1A-206ENST00000462537 CENPJQ9HC77 1338 aaPredicted RBP26.48■■□□□ 1.83
CDKN1A-206ENST00000462537 NBPF8Q3BBV2 869 aa26.48■■□□□ 1.83
CDKN1A-206ENST00000462537 QRICH2Q9H0J4 1663 aa26.47■■□□□ 1.83
CDKN1A-206ENST00000462537 PMFBP1Q8TBY8 1022 aa26.46■■□□□ 1.83
CDKN1A-206ENST00000462537 ITSN1Q15811 1721 aa26.45■■□□□ 1.83
CDKN1A-206ENST00000462537 RGS17Q9UGC6 210 aaPredicted RBP26.45■■□□□ 1.82
CDKN1A-206ENST00000462537 PRR36Q9H6K5 1346 aa26.44■■□□□ 1.82
CDKN1A-206ENST00000462537 KRT28Q7Z3Y7 464 aa26.44■■□□□ 1.82
CDKN1A-206ENST00000462537 COL22A1Q8NFW1 1626 aaPredicted RBP26.43■■□□□ 1.82
CDKN1A-206ENST00000462537 CDK19Q9BWU1 502 aa26.43■■□□□ 1.82
CDKN1A-206ENST00000462537 PSME1Q06323 249 aa26.42■■□□□ 1.82
CDKN1A-206ENST00000462537 ATP7BP35670 1465 aa26.41■■□□□ 1.82
CDKN1A-206ENST00000462537 NUDT16Q96DE0 195 aaKnown RBP26.4■■□□□ 1.82
CDKN1A-206ENST00000462537 RALGAPBQ86X10 1494 aa26.38■■□□□ 1.81
CDKN1A-206ENST00000462537 GPRASP1Q5JY77 1395 aa26.38■■□□□ 1.81
CDKN1A-206ENST00000462537 ADAMTS2O95450 1211 aa26.38■■□□□ 1.81
CDKN1A-206ENST00000462537 SPATA31A3Q5VYP0 1347 aa26.38■■□□□ 1.81
CDKN1A-206ENST00000462537 SRPK2P78362 688 aaKnown RBP26.37■■□□□ 1.81
CDKN1A-206ENST00000462537 NGDNQ8NEJ9 315 aaKnown RBP26.37■■□□□ 1.81
CDKN1A-206ENST00000462537 C8orf37Q96NL8 207 aa26.37■■□□□ 1.81
CDKN1A-206ENST00000462537 CARD11Q9BXL7 1154 aa26.37■■□□□ 1.81
CDKN1A-206ENST00000462537 TNS3Q68CZ2 1445 aa26.37■■□□□ 1.81
CDKN1A-206ENST00000462537 TOPAZ1Q8N9V7 1692 aa26.36■■□□□ 1.81
CDKN1A-206ENST00000462537 POTEAQ6S8J7 498 aa26.36■■□□□ 1.81
CDKN1A-206ENST00000462537 LMOD2Q6P5Q4 547 aa26.35■■□□□ 1.81
CDKN1A-206ENST00000462537 ZNF772Q68DY9 489 aaPredicted RBP26.34■■□□□ 1.81
CDKN1A-206ENST00000462537 CLSPNQ9HAW4 1339 aa26.34■■□□□ 1.81
CDKN1A-206ENST00000462537 SBNO1A3KN83 1393 aa26.33■■□□□ 1.81
CDKN1A-206ENST00000462537 TRPM3Q9HCF6 1732 aaPredicted RBP26.33■■□□□ 1.81
CDKN1A-206ENST00000462537 AFF2P51816 1311 aa26.33■■□□□ 1.81
CDKN1A-206ENST00000462537 CABP2Q9NPB3 220 aa26.31■■□□□ 1.8
CDKN1A-206ENST00000462537 CCDC61Q9Y6R9 512 aa26.31■■□□□ 1.8
CDKN1A-206ENST00000462537 PLEKHG5O94827 1062 aa26.3■■□□□ 1.8
CDKN1A-206ENST00000462537 CCER1Q8TC90 406 aaPredicted RBP26.3■■□□□ 1.8
CDKN1A-206ENST00000462537 NGLY1Q96IV0 654 aa26.3■■□□□ 1.8
CDKN1A-206ENST00000462537 EVC2Q86UK5 1308 aa26.3■■□□□ 1.8
CDKN1A-206ENST00000462537 MARF1Q9Y4F3 1742 aaKnown RBP26.3■■□□□ 1.8
CDKN1A-206ENST00000462537 ARHGEF10O15013 1369 aa26.3■■□□□ 1.8
CDKN1A-206ENST00000462537 SOCS7O14512 581 aa26.29■■□□□ 1.8
CDKN1A-206ENST00000462537 HAP1P54257 671 aaPredicted RBP26.28■■□□□ 1.8
CDKN1A-206ENST00000462537 PAK3O75914 559 aaPredicted RBP26.27■■□□□ 1.8
CDKN1A-206ENST00000462537 PPIP5K1Q6PFW1 1433 aa26.27■■□□□ 1.8
CDKN1A-206ENST00000462537 ALS2Q96Q42 1657 aa26.26■■□□□ 1.79
CDKN1A-206ENST00000462537 ACEP12821 1306 aa26.26■■□□□ 1.79
CDKN1A-206ENST00000462537 ABCA3Q99758 1704 aa26.25■■□□□ 1.79
CDKN1A-206ENST00000462537 POLR3AO14802 1390 aaPredicted RBP26.24■■□□□ 1.79
CDKN1A-206ENST00000462537 PLEKHG3A1L390 1219 aa26.24■■□□□ 1.79
CDKN1A-206ENST00000462537 CABLES1Q8TDN4 633 aa26.24■■□□□ 1.79
CDKN1A-206ENST00000462537 TIMELESSQ9UNS1 1208 aa26.23■■□□□ 1.79
CDKN1A-206ENST00000462537 USP21Q9UK80 565 aa26.2■■□□□ 1.78
CDKN1A-206ENST00000462537 CABP1Q9NZU7 370 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms