RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 TIMELESSQ9UNS1 1208 aa13.57□□□□□ -0.24
PKP4-208ENST00000462335 HIRIP3Q9BW71 556 aaPredicted RBP13.56□□□□□ -0.24
PKP4-208ENST00000462335 CARD11Q9BXL7 1154 aa13.56□□□□□ -0.24
PKP4-208ENST00000462335 TECPR2O15040 1411 aa13.56□□□□□ -0.24
PKP4-208ENST00000462335 PLEKHH1Q9ULM0 1364 aa13.55□□□□□ -0.24
PKP4-208ENST00000462335 KIAA1210Q9ULL0 1709 aa13.54□□□□□ -0.24
PKP4-208ENST00000462335 EIF3AQ14152 1382 aaKnown RBP13.54□□□□□ -0.24
PKP4-208ENST00000462335 KNDC1Q76NI1 1749 aa13.53□□□□□ -0.24
PKP4-208ENST00000462335 BRINP3Q76B58 766 aa13.53□□□□□ -0.24
PKP4-208ENST00000462335 CENPJQ9HC77 1338 aaPredicted RBP13.53□□□□□ -0.24
PKP4-208ENST00000462335 ASXL1Q8IXJ9 1541 aa13.53□□□□□ -0.24
PKP4-208ENST00000462335 ROBO1Q9Y6N7 1651 aa13.53□□□□□ -0.24
PKP4-208ENST00000462335 NBPF8Q3BBV2 869 aa13.52□□□□□ -0.25
PKP4-208ENST00000462335 DLC1Q96QB1 1528 aa13.52□□□□□ -0.25
PKP4-208ENST00000462335 NALCNQ8IZF0 1738 aa13.52□□□□□ -0.25
PKP4-208ENST00000462335 WASLO00401 505 aaPredicted RBP13.51□□□□□ -0.25
PKP4-208ENST00000462335 SRPK2P78362 688 aaKnown RBP13.51□□□□□ -0.25
PKP4-208ENST00000462335 PSME1Q06323 249 aa13.51□□□□□ -0.25
PKP4-208ENST00000462335 ORAI2Q96SN7 254 aa13.51□□□□□ -0.25
PKP4-208ENST00000462335 ADGRB1O14514 1584 aa13.5□□□□□ -0.25
PKP4-208ENST00000462335 MST1RQ04912 1400 aa13.5□□□□□ -0.25
PKP4-208ENST00000462335 LRRC59Q96AG4 307 aaKnown RBP13.5□□□□□ -0.25
PKP4-208ENST00000462335 PHF23Q9BUL5 403 aaPredicted RBP13.5□□□□□ -0.25
PKP4-208ENST00000462335 C1orf167Q5SNV9 1468 aa13.49□□□□□ -0.25
PKP4-208ENST00000462335 FOXO3O43524 673 aa13.49□□□□□ -0.25
PKP4-208ENST00000462335 MEX3CQ5U5Q3 659 aaKnown RBP13.49□□□□□ -0.25
PKP4-208ENST00000462335 NGDNQ8NEJ9 315 aaKnown RBP13.49□□□□□ -0.25
PKP4-208ENST00000462335 CDK19Q9BWU1 502 aa13.49□□□□□ -0.25
PKP4-208ENST00000462335 PHF8Q9UPP1 1060 aa13.49□□□□□ -0.25
PKP4-208ENST00000462335 PHLPP1O60346 1717 aa13.48□□□□□ -0.25
PKP4-208ENST00000462335 NPHP3Q7Z494 1330 aa13.48□□□□□ -0.25
PKP4-208ENST00000462335 EVC2Q86UK5 1308 aa13.48□□□□□ -0.25
PKP4-208ENST00000462335 LMOD2Q6P5Q4 547 aa13.48□□□□□ -0.25
PKP4-208ENST00000462335 CDC42BPGQ6DT37 1551 aa13.47□□□□□ -0.25
PKP4-208ENST00000462335 SLC24A1O60721 1099 aa13.47□□□□□ -0.25
PKP4-208ENST00000462335 TRPM1Q7Z4N2 1603 aa13.46□□□□□ -0.25
PKP4-208ENST00000462335 NUTM2BA6NNL0 878 aaPredicted RBP13.46□□□□□ -0.25
PKP4-208ENST00000462335 NUTM2EB1AL46 878 aaPredicted RBP13.46□□□□□ -0.25
PKP4-208ENST00000462335 NUTM2AQ8IVF1 878 aaPredicted RBP13.46□□□□□ -0.25
PKP4-208ENST00000462335 PMFBP1Q8TBY8 1022 aa13.46□□□□□ -0.25
PKP4-208ENST00000462335 DDX17Q92841 729 aaKnown RBP13.46□□□□□ -0.25
PKP4-208ENST00000462335 NUDT16Q96DE0 195 aaKnown RBP13.46□□□□□ -0.25
PKP4-208ENST00000462335 JCADQ9P266 1359 aa13.45□□□□□ -0.26
PKP4-208ENST00000462335 HAP1P54257 671 aaPredicted RBP13.45□□□□□ -0.26
PKP4-208ENST00000462335 XPCQ01831 940 aaPredicted RBP13.45□□□□□ -0.26
PKP4-208ENST00000462335 KRT28Q7Z3Y7 464 aa13.45□□□□□ -0.26
PKP4-208ENST00000462335 GPRASP1Q5JY77 1395 aa13.45□□□□□ -0.26
PKP4-208ENST00000462335 PAK3O75914 559 aaPredicted RBP13.44□□□□□ -0.26
PKP4-208ENST00000462335 ARHGEF28Q8N1W1 1705 aaKnown RBP13.44□□□□□ -0.26
PKP4-208ENST00000462335 DISP3Q9P2K9 1392 aa13.44□□□□□ -0.26
PKP4-208ENST00000462335 PLEKHG5O94827 1062 aa13.43□□□□□ -0.26
PKP4-208ENST00000462335 CABP2Q9NPB3 220 aa13.43□□□□□ -0.26
PKP4-208ENST00000462335 CCDC61Q9Y6R9 512 aa13.43□□□□□ -0.26
PKP4-208ENST00000462335 RALGAPBQ86X10 1494 aa13.42□□□□□ -0.26
PKP4-208ENST00000462335 FMN2Q9NZ56 1722 aa13.42□□□□□ -0.26
PKP4-208ENST00000462335 ANKARQ7Z5J8 1434 aa13.42□□□□□ -0.26
PKP4-208ENST00000462335 SPATA31A6Q5VVP1 1343 aa13.4□□□□□ -0.26
PKP4-208ENST00000462335 AHDC1Q5TGY3 1603 aaPredicted RBP13.4□□□□□ -0.26
PKP4-208ENST00000462335 TMC1Q8TDI8 760 aa13.4□□□□□ -0.26
PKP4-208ENST00000462335 QRICH2Q9H0J4 1663 aa13.4□□□□□ -0.26
PKP4-208ENST00000462335 ST20-MTHFSA0A0A6YYL1 179 aa13.39□□□□□ -0.27
PKP4-208ENST00000462335 RGPD8O14715 1765 aaPredicted RBP13.39□□□□□ -0.27
PKP4-208ENST00000462335 TULP4Q9NRJ4 1543 aa13.39□□□□□ -0.27
PKP4-208ENST00000462335 SOS2Q07890 1332 aaPredicted RBP13.39□□□□□ -0.27
PKP4-208ENST00000462335 KIF1AQ12756 1690 aa13.38□□□□□ -0.27
PKP4-208ENST00000462335 ADGRB2O60241 1585 aa13.38□□□□□ -0.27
PKP4-208ENST00000462335 TMF1P82094 1093 aa13.38□□□□□ -0.27
PKP4-208ENST00000462335 CDCA8Q53HL2 280 aa13.38□□□□□ -0.27
PKP4-208ENST00000462335 ADAMTS2O95450 1211 aa13.37□□□□□ -0.27
PKP4-208ENST00000462335 EIF4G2P78344 907 aaKnown RBP eCLIP13.37□□□□□ -0.27
PKP4-208ENST00000462335 POLR3GLQ9BT43 218 aa13.37□□□□□ -0.27
PKP4-208ENST00000462335 CABP1Q9NZU7 370 aa13.37□□□□□ -0.27
PKP4-208ENST00000462335 PRR36Q9H6K5 1346 aa13.37□□□□□ -0.27
PKP4-208ENST00000462335 NHSL1Q5SYE7 1610 aa13.36□□□□□ -0.27
PKP4-208ENST00000462335 USP47Q96K76 1375 aa13.36□□□□□ -0.27
PKP4-208ENST00000462335 ACEP12821 1306 aa13.36□□□□□ -0.27
PKP4-208ENST00000462335 ITSN1Q15811 1721 aa13.36□□□□□ -0.27
PKP4-208ENST00000462335 COL16A1Q07092 1604 aaPredicted RBP13.35□□□□□ -0.27
PKP4-208ENST00000462335 ATAD2Q6PL18 1390 aa13.35□□□□□ -0.27
PKP4-208ENST00000462335 HDGFL2Q7Z4V5 671 aaPredicted RBP13.35□□□□□ -0.27
PKP4-208ENST00000462335 NGLY1Q96IV0 654 aa13.35□□□□□ -0.27
PKP4-208ENST00000462335 PPIP5K1Q6PFW1 1433 aa13.35□□□□□ -0.27
PKP4-208ENST00000462335 PLEKHG3A1L390 1219 aa13.34□□□□□ -0.27
PKP4-208ENST00000462335 C8orf37Q96NL8 207 aa13.34□□□□□ -0.27
PKP4-208ENST00000462335 ZNF692Q9BU19 519 aaPredicted RBP13.34□□□□□ -0.27
PKP4-208ENST00000462335 SPATA31A3Q5VYP0 1347 aa13.34□□□□□ -0.27
PKP4-208ENST00000462335 ARHGEF10O15013 1369 aa13.33□□□□□ -0.27
PKP4-208ENST00000462335 ABTB2Q8N961 1025 aa13.33□□□□□ -0.28
PKP4-208ENST00000462335 TERF2IPQ9NYB0 399 aa13.33□□□□□ -0.28
PKP4-208ENST00000462335 SBNO1A3KN83 1393 aa13.32□□□□□ -0.28
PKP4-208ENST00000462335 PNPLA6Q8IY17 1366 aa13.32□□□□□ -0.28
PKP4-208ENST00000462335 MED1Q15648 1581 aaPredicted RBP13.32□□□□□ -0.28
PKP4-208ENST00000462335 SBNO2Q9Y2G9 1366 aa13.32□□□□□ -0.28
PKP4-208ENST00000462335 ZNF772Q68DY9 489 aaPredicted RBP13.31□□□□□ -0.28
PKP4-208ENST00000462335 SHPRHQ149N8 1683 aa13.31□□□□□ -0.28
PKP4-208ENST00000462335 ATP7BP35670 1465 aa13.3□□□□□ -0.28
PKP4-208ENST00000462335 PXDNQ92626 1479 aa13.3□□□□□ -0.28
PKP4-208ENST00000462335 NUTM2GQ5VZR2 741 aa13.3□□□□□ -0.28
PKP4-208ENST00000462335 PUS7Q96PZ0 661 aaKnown RBP13.3□□□□□ -0.28
PKP4-208ENST00000462335 USP32Q8NFA0 1604 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms