RNA–Protein interactions for RNA: ENST00000461768.5

SRRM1-204, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-204ENST00000461768 FBXO41Q8TF61 875 aa12.06□□□□□ -0.48
SRRM1-204ENST00000461768 PRAM1Q96QH2 718 aa12.06□□□□□ -0.48
SRRM1-204ENST00000461768 TOM1O60784 492 aa12.05□□□□□ -0.48
SRRM1-204ENST00000461768 CDC42BPGQ6DT37 1551 aa12.05□□□□□ -0.48
SRRM1-204ENST00000461768 POGKQ9P215 609 aa12.04□□□□□ -0.48
SRRM1-204ENST00000461768 ATF3P18847 181 aa12.03□□□□□ -0.48
SRRM1-204ENST00000461768 CADPS2Q86UW7 1296 aa12.03□□□□□ -0.48
SRRM1-204ENST00000461768 ADGRB2O60241 1585 aa12.03□□□□□ -0.48
SRRM1-204ENST00000461768 SAFB2Q14151 953 aaKnown RBP eCLIP12.02□□□□□ -0.49
SRRM1-204ENST00000461768 MST1RQ04912 1400 aa12.02□□□□□ -0.49
SRRM1-204ENST00000461768 CARD11Q9BXL7 1154 aa12.01□□□□□ -0.49
SRRM1-204ENST00000461768 SLAIN2Q9P270 581 aa12.01□□□□□ -0.49
SRRM1-204ENST00000461768 QRICH2Q9H0J4 1663 aa12□□□□□ -0.49
SRRM1-204ENST00000461768 FMN2Q9NZ56 1722 aa12□□□□□ -0.49
SRRM1-204ENST00000461768 EIF3AQ14152 1382 aaKnown RBP12□□□□□ -0.49
SRRM1-204ENST00000461768 PIP4K2BP78356 416 aa11.99□□□□□ -0.49
SRRM1-204ENST00000461768 MINK1Q8N4C8 1332 aaPredicted RBP11.99□□□□□ -0.49
SRRM1-204ENST00000461768 CENPJQ9HC77 1338 aaPredicted RBP11.99□□□□□ -0.49
SRRM1-204ENST00000461768 ROBO1Q9Y6N7 1651 aa11.99□□□□□ -0.49
SRRM1-204ENST00000461768 C1orf167Q5SNV9 1468 aa11.98□□□□□ -0.49
SRRM1-204ENST00000461768 SCAF1Q9H7N4 1312 aaKnown RBP11.97□□□□□ -0.49
SRRM1-204ENST00000461768 ILDR1Q86SU0 546 aaPredicted RBP11.97□□□□□ -0.49
SRRM1-204ENST00000461768 HIRIP3Q9BW71 556 aaPredicted RBP11.97□□□□□ -0.49
SRRM1-204ENST00000461768 WASLO00401 505 aaPredicted RBP11.96□□□□□ -0.49
SRRM1-204ENST00000461768 USP32Q8NFA0 1604 aa11.96□□□□□ -0.5
SRRM1-204ENST00000461768 USP47Q96K76 1375 aa11.95□□□□□ -0.5
SRRM1-204ENST00000461768 SBNO2Q9Y2G9 1366 aa11.95□□□□□ -0.5
SRRM1-204ENST00000461768 BRINP3Q76B58 766 aa11.95□□□□□ -0.5
SRRM1-204ENST00000461768 TULP4Q9NRJ4 1543 aa11.95□□□□□ -0.5
SRRM1-204ENST00000461768 ANKARQ7Z5J8 1434 aa11.94□□□□□ -0.5
SRRM1-204ENST00000461768 RGPD8O14715 1765 aaPredicted RBP11.94□□□□□ -0.5
SRRM1-204ENST00000461768 NHSL1Q5SYE7 1610 aa11.93□□□□□ -0.5
SRRM1-204ENST00000461768 AHDC1Q5TGY3 1603 aaPredicted RBP11.93□□□□□ -0.5
SRRM1-204ENST00000461768 NUTM2FA1L443 756 aa11.93□□□□□ -0.5
SRRM1-204ENST00000461768 ORAI2Q96SN7 254 aa11.93□□□□□ -0.5
SRRM1-204ENST00000461768 CDK19Q9BWU1 502 aa11.93□□□□□ -0.5
SRRM1-204ENST00000461768 ATP7BP35670 1465 aa11.93□□□□□ -0.5
SRRM1-204ENST00000461768 PRR36Q9H6K5 1346 aa11.92□□□□□ -0.5
SRRM1-204ENST00000461768 KIF1AQ12756 1690 aa11.92□□□□□ -0.5
SRRM1-204ENST00000461768 ST20-MTHFSA0A0A6YYL1 179 aa11.92□□□□□ -0.5
SRRM1-204ENST00000461768 HSPA1LP34931 641 aa11.92□□□□□ -0.5
SRRM1-204ENST00000461768 EVC2Q86UK5 1308 aa11.91□□□□□ -0.5
SRRM1-204ENST00000461768 TOPAZ1Q8N9V7 1692 aa11.91□□□□□ -0.5
SRRM1-204ENST00000461768 ESCO1Q5FWF5 840 aa11.91□□□□□ -0.5
SRRM1-204ENST00000461768 TESK2Q96S53 571 aa11.91□□□□□ -0.5
SRRM1-204ENST00000461768 PHLPP1O60346 1717 aa11.91□□□□□ -0.5
SRRM1-204ENST00000461768 ITSN1Q15811 1721 aa11.91□□□□□ -0.5
SRRM1-204ENST00000461768 COL16A1Q07092 1604 aaPredicted RBP11.9□□□□□ -0.5
SRRM1-204ENST00000461768 NUDT16Q96DE0 195 aaKnown RBP11.9□□□□□ -0.5
SRRM1-204ENST00000461768 SRPK2P78362 688 aaKnown RBP11.89□□□□□ -0.51
SRRM1-204ENST00000461768 CABP2Q9NPB3 220 aa11.89□□□□□ -0.51
SRRM1-204ENST00000461768 PHF8Q9UPP1 1060 aa11.89□□□□□ -0.51
SRRM1-204ENST00000461768 SLC24A1O60721 1099 aa11.87□□□□□ -0.51
SRRM1-204ENST00000461768 EIF4G2P78344 907 aaKnown RBP eCLIP11.87□□□□□ -0.51
SRRM1-204ENST00000461768 DDX17Q92841 729 aaKnown RBP11.87□□□□□ -0.51
SRRM1-204ENST00000461768 CCDC61Q9Y6R9 512 aa11.87□□□□□ -0.51
SRRM1-204ENST00000461768 PXDNQ92626 1479 aa11.87□□□□□ -0.51
SRRM1-204ENST00000461768 SOS2Q07890 1332 aaPredicted RBP11.86□□□□□ -0.51
SRRM1-204ENST00000461768 NPHP3Q7Z494 1330 aa11.86□□□□□ -0.51
SRRM1-204ENST00000461768 FOXO3O43524 673 aa11.86□□□□□ -0.51
SRRM1-204ENST00000461768 HSPA5P11021 654 aaKnown RBP11.86□□□□□ -0.51
SRRM1-204ENST00000461768 PPIP5K1Q6PFW1 1433 aa11.86□□□□□ -0.51
SRRM1-204ENST00000461768 POLR3AO14802 1390 aaPredicted RBP11.85□□□□□ -0.51
SRRM1-204ENST00000461768 ATAD2Q6PL18 1390 aa11.85□□□□□ -0.51
SRRM1-204ENST00000461768 DISP3Q9P2K9 1392 aa11.85□□□□□ -0.51
SRRM1-204ENST00000461768 PLEKHG3A1L390 1219 aa11.85□□□□□ -0.51
SRRM1-204ENST00000461768 PMFBP1Q8TBY8 1022 aa11.85□□□□□ -0.51
SRRM1-204ENST00000461768 PUS7Q96PZ0 661 aaKnown RBP11.85□□□□□ -0.51
SRRM1-204ENST00000461768 TMF1P82094 1093 aa11.84□□□□□ -0.51
SRRM1-204ENST00000461768 XPCQ01831 940 aaPredicted RBP11.83□□□□□ -0.52
SRRM1-204ENST00000461768 NGDNQ8NEJ9 315 aaKnown RBP11.83□□□□□ -0.52
SRRM1-204ENST00000461768 LRRC59Q96AG4 307 aaKnown RBP11.83□□□□□ -0.52
SRRM1-204ENST00000461768 SHPRHQ149N8 1683 aa11.83□□□□□ -0.52
SRRM1-204ENST00000461768 ACEP12821 1306 aa11.83□□□□□ -0.52
SRRM1-204ENST00000461768 TRPM3Q9HCF6 1732 aaPredicted RBP11.83□□□□□ -0.52
SRRM1-204ENST00000461768 JCADQ9P266 1359 aa11.82□□□□□ -0.52
SRRM1-204ENST00000461768 ZEB1P37275 1124 aaPredicted RBP11.82□□□□□ -0.52
SRRM1-204ENST00000461768 PSME1Q06323 249 aa11.82□□□□□ -0.52
SRRM1-204ENST00000461768 KRT28Q7Z3Y7 464 aa11.82□□□□□ -0.52
SRRM1-204ENST00000461768 PHF23Q9BUL5 403 aaPredicted RBP11.82□□□□□ -0.52
SRRM1-204ENST00000461768 CABP1Q9NZU7 370 aa11.82□□□□□ -0.52
SRRM1-204ENST00000461768 SBNO1A3KN83 1393 aa11.81□□□□□ -0.52
SRRM1-204ENST00000461768 CDCA8Q53HL2 280 aa11.81□□□□□ -0.52
SRRM1-204ENST00000461768 NINLQ9Y2I6 1382 aa11.8□□□□□ -0.52
SRRM1-204ENST00000461768 AKAP12Q02952 1782 aa11.8□□□□□ -0.52
SRRM1-204ENST00000461768 COL22A1Q8NFW1 1626 aaPredicted RBP11.8□□□□□ -0.52
SRRM1-204ENST00000461768 SPATA31A3Q5VYP0 1347 aa11.8□□□□□ -0.52
SRRM1-204ENST00000461768 PNPLA6Q8IY17 1366 aa11.79□□□□□ -0.52
SRRM1-204ENST00000461768 CPSF1Q10570 1443 aaKnown RBP11.79□□□□□ -0.52
SRRM1-204ENST00000461768 TNS3Q68CZ2 1445 aa11.79□□□□□ -0.52
SRRM1-204ENST00000461768 ALS2Q96Q42 1657 aa11.79□□□□□ -0.52
SRRM1-204ENST00000461768 CD163L1Q9NR16 1453 aa11.79□□□□□ -0.52
SRRM1-204ENST00000461768 USP6P35125 1406 aa11.78□□□□□ -0.52
SRRM1-204ENST00000461768 MYOM1P52179 1685 aa11.78□□□□□ -0.52
SRRM1-204ENST00000461768 MON2Q7Z3U7 1717 aa11.78□□□□□ -0.52
SRRM1-204ENST00000461768 TMC1Q8TDI8 760 aa11.78□□□□□ -0.52
SRRM1-204ENST00000461768 SLC12A5Q9H2X9 1139 aa11.78□□□□□ -0.52
SRRM1-204ENST00000461768 BRD4O60885 1362 aaPredicted RBP11.78□□□□□ -0.52
SRRM1-204ENST00000461768 SSH2Q76I76 1423 aa11.77□□□□□ -0.52
SRRM1-204ENST00000461768 NRKQ7Z2Y5 1582 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms