RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 CDC42BPGQ6DT37 1551 aa32.66■■■□□ 2.82
TRAF4-207ENST00000461195 C1orf167Q5SNV9 1468 aa32.65■■■□□ 2.82
TRAF4-207ENST00000461195 ADGRB1O14514 1584 aa32.64■■■□□ 2.82
TRAF4-207ENST00000461195 PLEKHH1Q9ULM0 1364 aa32.64■■■□□ 2.82
TRAF4-207ENST00000461195 POTEAQ6S8J7 498 aa32.63■■■□□ 2.81
TRAF4-207ENST00000461195 NHSL1Q5SYE7 1610 aa32.6■■■□□ 2.81
TRAF4-207ENST00000461195 DLC1Q96QB1 1528 aa32.6■■■□□ 2.81
TRAF4-207ENST00000461195 JCADQ9P266 1359 aa32.59■■■□□ 2.81
TRAF4-207ENST00000461195 PRAM1Q96QH2 718 aa32.55■■■□□ 2.8
TRAF4-207ENST00000461195 SIN3AQ96ST3 1273 aa32.55■■■□□ 2.8
TRAF4-207ENST00000461195 ORAI2Q96SN7 254 aa32.53■■■□□ 2.8
TRAF4-207ENST00000461195 POGKQ9P215 609 aa32.53■■■□□ 2.8
TRAF4-207ENST00000461195 TRAK1Q9UPV9 953 aa32.53■■■□□ 2.8
TRAF4-207ENST00000461195 KIAA1210Q9ULL0 1709 aa32.53■■■□□ 2.8
TRAF4-207ENST00000461195 FMN2Q9NZ56 1722 aa32.51■■■□□ 2.8
TRAF4-207ENST00000461195 SHPRHQ149N8 1683 aa32.5■■■□□ 2.79
TRAF4-207ENST00000461195 NEUROD1Q13562 356 aa32.5■■■□□ 2.79
TRAF4-207ENST00000461195 SAFB2Q14151 953 aaKnown RBP eCLIP32.5■■■□□ 2.79
TRAF4-207ENST00000461195 DDX17Q92841 729 aaKnown RBP32.49■■■□□ 2.79
TRAF4-207ENST00000461195 L3MBTL2Q969R5 705 aa32.48■■■□□ 2.79
TRAF4-207ENST00000461195 ESCO1Q5FWF5 840 aa32.47■■■□□ 2.79
TRAF4-207ENST00000461195 NUTM2FA1L443 756 aa32.46■■■□□ 2.79
TRAF4-207ENST00000461195 LRRC59Q96AG4 307 aaKnown RBP32.45■■■□□ 2.79
TRAF4-207ENST00000461195 SPATA31A6Q5VVP1 1343 aa32.45■■■□□ 2.78
TRAF4-207ENST00000461195 ARHGEF28Q8N1W1 1705 aaKnown RBP32.43■■■□□ 2.78
TRAF4-207ENST00000461195 ADGRB2O60241 1585 aa32.42■■■□□ 2.78
TRAF4-207ENST00000461195 SOS2Q07890 1332 aaPredicted RBP32.4■■■□□ 2.78
TRAF4-207ENST00000461195 RGPD8O14715 1765 aaPredicted RBP32.38■■■□□ 2.77
TRAF4-207ENST00000461195 NPHP3Q7Z494 1330 aa32.38■■■□□ 2.77
TRAF4-207ENST00000461195 NBPF1Q3BBV0 1214 aa32.38■■■□□ 2.77
TRAF4-207ENST00000461195 KIF1AQ12756 1690 aa32.37■■■□□ 2.77
TRAF4-207ENST00000461195 MINK1Q8N4C8 1332 aaPredicted RBP32.36■■■□□ 2.77
TRAF4-207ENST00000461195 HIRIP3Q9BW71 556 aaPredicted RBP32.35■■■□□ 2.77
TRAF4-207ENST00000461195 LRP6O75581 1613 aa32.35■■■□□ 2.77
TRAF4-207ENST00000461195 FOXO3O43524 673 aa32.34■■■□□ 2.77
TRAF4-207ENST00000461195 MEX3CQ5U5Q3 659 aaKnown RBP32.34■■■□□ 2.77
TRAF4-207ENST00000461195 PNPLA6Q8IY17 1366 aa32.33■■■□□ 2.77
TRAF4-207ENST00000461195 ANKARQ7Z5J8 1434 aa32.32■■■□□ 2.76
TRAF4-207ENST00000461195 PXDNQ92626 1479 aa32.31■■■□□ 2.76
TRAF4-207ENST00000461195 TRPM1Q7Z4N2 1603 aa32.3■■■□□ 2.76
TRAF4-207ENST00000461195 USP32Q8NFA0 1604 aa32.3■■■□□ 2.76
TRAF4-207ENST00000461195 NUTM2BA6NNL0 878 aaPredicted RBP32.3■■■□□ 2.76
TRAF4-207ENST00000461195 NUTM2EB1AL46 878 aaPredicted RBP32.3■■■□□ 2.76
TRAF4-207ENST00000461195 NUTM2AQ8IVF1 878 aaPredicted RBP32.3■■■□□ 2.76
TRAF4-207ENST00000461195 EIF3AQ14152 1382 aaKnown RBP32.3■■■□□ 2.76
TRAF4-207ENST00000461195 PHF8Q9UPP1 1060 aa32.29■■■□□ 2.76
TRAF4-207ENST00000461195 WASLO00401 505 aaPredicted RBP32.28■■■□□ 2.76
TRAF4-207ENST00000461195 TULP4Q9NRJ4 1543 aa32.26■■■□□ 2.76
TRAF4-207ENST00000461195 XPCQ01831 940 aaPredicted RBP32.26■■■□□ 2.75
TRAF4-207ENST00000461195 TONSLQ96HA7 1378 aa32.26■■■□□ 2.75
TRAF4-207ENST00000461195 ZNF772Q68DY9 489 aaPredicted RBP32.25■■■□□ 2.75
TRAF4-207ENST00000461195 COL22A1Q8NFW1 1626 aaPredicted RBP32.22■■■□□ 2.75
TRAF4-207ENST00000461195 ROCK2O75116 1388 aaKnown RBP32.2■■■□□ 2.75
TRAF4-207ENST00000461195 KRT28Q7Z3Y7 464 aa32.2■■■□□ 2.75
TRAF4-207ENST00000461195 PCGF6Q9BYE7 350 aa32.2■■■□□ 2.75
TRAF4-207ENST00000461195 PRR36Q9H6K5 1346 aa32.2■■■□□ 2.74
TRAF4-207ENST00000461195 CENPJQ9HC77 1338 aaPredicted RBP32.19■■■□□ 2.74
TRAF4-207ENST00000461195 NBPF8Q3BBV2 869 aa32.18■■■□□ 2.74
TRAF4-207ENST00000461195 PMFBP1Q8TBY8 1022 aa32.18■■■□□ 2.74
TRAF4-207ENST00000461195 PSME1Q06323 249 aa32.17■■■□□ 2.74
TRAF4-207ENST00000461195 QRICH2Q9H0J4 1663 aa32.16■■■□□ 2.74
TRAF4-207ENST00000461195 CDK19Q9BWU1 502 aa32.16■■■□□ 2.74
TRAF4-207ENST00000461195 ITSN1Q15811 1721 aa32.16■■■□□ 2.74
TRAF4-207ENST00000461195 SPATA31A3Q5VYP0 1347 aa32.15■■■□□ 2.74
TRAF4-207ENST00000461195 ATP7BP35670 1465 aa32.14■■■□□ 2.74
TRAF4-207ENST00000461195 NUDT16Q96DE0 195 aaKnown RBP32.13■■■□□ 2.73
TRAF4-207ENST00000461195 SBNO1A3KN83 1393 aa32.11■■■□□ 2.73
TRAF4-207ENST00000461195 ADAMTS2O95450 1211 aa32.11■■■□□ 2.73
TRAF4-207ENST00000461195 TNS3Q68CZ2 1445 aa32.1■■■□□ 2.73
TRAF4-207ENST00000461195 GPRASP1Q5JY77 1395 aa32.1■■■□□ 2.73
TRAF4-207ENST00000461195 RXRBP28702 533 aa32.1■■■□□ 2.73
TRAF4-207ENST00000461195 C8orf37Q96NL8 207 aa32.1■■■□□ 2.73
TRAF4-207ENST00000461195 AFF2P51816 1311 aa32.08■■■□□ 2.73
TRAF4-207ENST00000461195 UPF1Q92900 1129 aaKnown RBP eCLIP32.08■■■□□ 2.73
TRAF4-207ENST00000461195 NGDNQ8NEJ9 315 aaKnown RBP32.07■■■□□ 2.72
TRAF4-207ENST00000461195 TOPAZ1Q8N9V7 1692 aa32.06■■■□□ 2.72
TRAF4-207ENST00000461195 RALGAPBQ86X10 1494 aa32.06■■■□□ 2.72
TRAF4-207ENST00000461195 TRPM3Q9HCF6 1732 aaPredicted RBP32.05■■■□□ 2.72
TRAF4-207ENST00000461195 SRPK2P78362 688 aaKnown RBP32.04■■■□□ 2.72
TRAF4-207ENST00000461195 NGLY1Q96IV0 654 aa32.04■■■□□ 2.72
TRAF4-207ENST00000461195 CCDC61Q9Y6R9 512 aa32.04■■■□□ 2.72
TRAF4-207ENST00000461195 MARF1Q9Y4F3 1742 aaKnown RBP32.03■■■□□ 2.72
TRAF4-207ENST00000461195 CARD11Q9BXL7 1154 aa32.03■■■□□ 2.72
TRAF4-207ENST00000461195 ARHGEF10O15013 1369 aa32.03■■■□□ 2.72
TRAF4-207ENST00000461195 LMOD2Q6P5Q4 547 aa32.02■■■□□ 2.72
TRAF4-207ENST00000461195 CLSPNQ9HAW4 1339 aa32.01■■■□□ 2.72
TRAF4-207ENST00000461195 CABP2Q9NPB3 220 aa31.99■■■□□ 2.71
TRAF4-207ENST00000461195 PLEKHG3A1L390 1219 aa31.98■■■□□ 2.71
TRAF4-207ENST00000461195 ALS2Q96Q42 1657 aa31.98■■■□□ 2.71
TRAF4-207ENST00000461195 EVC2Q86UK5 1308 aa31.98■■■□□ 2.71
TRAF4-207ENST00000461195 CDK12Q9NYV4 1490 aaPredicted RBP31.97■■■□□ 2.71
TRAF4-207ENST00000461195 POLR3AO14802 1390 aaPredicted RBP31.96■■■□□ 2.71
TRAF4-207ENST00000461195 ACEP12821 1306 aa31.95■■■□□ 2.7
TRAF4-207ENST00000461195 PPIP5K1Q6PFW1 1433 aa31.94■■■□□ 2.7
TRAF4-207ENST00000461195 HAP1P54257 671 aaPredicted RBP31.94■■■□□ 2.7
TRAF4-207ENST00000461195 FNBP4Q8N3X1 1017 aaPredicted RBP31.94■■■□□ 2.7
TRAF4-207ENST00000461195 ABCA3Q99758 1704 aa31.94■■■□□ 2.7
TRAF4-207ENST00000461195 PAK3O75914 559 aaPredicted RBP31.93■■■□□ 2.7
TRAF4-207ENST00000461195 CABLES1Q8TDN4 633 aa31.93■■■□□ 2.7
TRAF4-207ENST00000461195 QTRT2Q9H974 415 aaKnown RBP31.93■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms