RNA–Protein interactions for RNA: ENST00000460048.1

SHANK2-213, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 736 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-213ENST00000460048 STAC3Q96MF2 364 aa24.12■■□□□ 1.45
SHANK2-213ENST00000460048 PLEKHH1Q9ULM0 1364 aa24.12■■□□□ 1.45
SHANK2-213ENST00000460048 ADGRB1O14514 1584 aa24.12■■□□□ 1.45
SHANK2-213ENST00000460048 DCAF11Q8TEB1 546 aa24.11■■□□□ 1.45
SHANK2-213ENST00000460048 KDM2AQ9Y2K7 1162 aa24.09■■□□□ 1.45
SHANK2-213ENST00000460048 FMN2Q9NZ56 1722 aa24.09■■□□□ 1.45
SHANK2-213ENST00000460048 DLC1Q96QB1 1528 aa24.08■■□□□ 1.45
SHANK2-213ENST00000460048 ORAI2Q96SN7 254 aa24.07■■□□□ 1.44
SHANK2-213ENST00000460048 RGS17Q9UGC6 210 aaPredicted RBP24.07■■□□□ 1.44
SHANK2-213ENST00000460048 SPATA31A6Q5VVP1 1343 aa24.07■■□□□ 1.44
SHANK2-213ENST00000460048 DDX17Q92841 729 aaKnown RBP24.06■■□□□ 1.44
SHANK2-213ENST00000460048 LRP6O75581 1613 aa24.05■■□□□ 1.44
SHANK2-213ENST00000460048 RGPD8O14715 1765 aaPredicted RBP24.03■■□□□ 1.44
SHANK2-213ENST00000460048 KIAA1210Q9ULL0 1709 aa24.02■■□□□ 1.44
SHANK2-213ENST00000460048 LRRC59Q96AG4 307 aaKnown RBP24.02■■□□□ 1.44
SHANK2-213ENST00000460048 PRAM1Q96QH2 718 aa24■■□□□ 1.43
SHANK2-213ENST00000460048 SOS2Q07890 1332 aaPredicted RBP24■■□□□ 1.43
SHANK2-213ENST00000460048 ADGRB2O60241 1585 aa23.99■■□□□ 1.43
SHANK2-213ENST00000460048 ESCO1Q5FWF5 840 aa23.98■■□□□ 1.43
SHANK2-213ENST00000460048 PNPLA6Q8IY17 1366 aa23.98■■□□□ 1.43
SHANK2-213ENST00000460048 ARHGEF28Q8N1W1 1705 aaKnown RBP23.98■■□□□ 1.43
SHANK2-213ENST00000460048 KIF1AQ12756 1690 aa23.97■■□□□ 1.43
SHANK2-213ENST00000460048 TRAK1Q9UPV9 953 aa23.96■■□□□ 1.43
SHANK2-213ENST00000460048 NUTM2FA1L443 756 aa23.95■■□□□ 1.42
SHANK2-213ENST00000460048 PXDNQ92626 1479 aa23.94■■□□□ 1.42
SHANK2-213ENST00000460048 SAFB2Q14151 953 aaKnown RBP eCLIP23.94■■□□□ 1.42
SHANK2-213ENST00000460048 POGKQ9P215 609 aa23.94■■□□□ 1.42
SHANK2-213ENST00000460048 NPHP3Q7Z494 1330 aa23.93■■□□□ 1.42
SHANK2-213ENST00000460048 USP32Q8NFA0 1604 aa23.93■■□□□ 1.42
SHANK2-213ENST00000460048 COL22A1Q8NFW1 1626 aaPredicted RBP23.93■■□□□ 1.42
SHANK2-213ENST00000460048 POTEAQ6S8J7 498 aa23.93■■□□□ 1.42
SHANK2-213ENST00000460048 NUTM2BA6NNL0 878 aaPredicted RBP23.9■■□□□ 1.42
SHANK2-213ENST00000460048 NUTM2EB1AL46 878 aaPredicted RBP23.9■■□□□ 1.42
SHANK2-213ENST00000460048 FOXO3O43524 673 aa23.9■■□□□ 1.42
SHANK2-213ENST00000460048 MEX3CQ5U5Q3 659 aaKnown RBP23.9■■□□□ 1.42
SHANK2-213ENST00000460048 NUTM2AQ8IVF1 878 aaPredicted RBP23.9■■□□□ 1.42
SHANK2-213ENST00000460048 SIN3AQ96ST3 1273 aa23.9■■□□□ 1.42
SHANK2-213ENST00000460048 TRIM26Q12899 539 aaPredicted RBP23.89■■□□□ 1.41
SHANK2-213ENST00000460048 ANKARQ7Z5J8 1434 aa23.87■■□□□ 1.41
SHANK2-213ENST00000460048 L3MBTL2Q969R5 705 aa23.86■■□□□ 1.41
SHANK2-213ENST00000460048 MINK1Q8N4C8 1332 aaPredicted RBP23.85■■□□□ 1.41
SHANK2-213ENST00000460048 XPCQ01831 940 aaPredicted RBP23.84■■□□□ 1.41
SHANK2-213ENST00000460048 NBPF1Q3BBV0 1214 aa23.84■■□□□ 1.41
SHANK2-213ENST00000460048 HIRIP3Q9BW71 556 aaPredicted RBP23.84■■□□□ 1.41
SHANK2-213ENST00000460048 PHF8Q9UPP1 1060 aa23.84■■□□□ 1.41
SHANK2-213ENST00000460048 TULP4Q9NRJ4 1543 aa23.84■■□□□ 1.41
SHANK2-213ENST00000460048 ZNF772Q68DY9 489 aaPredicted RBP23.83■■□□□ 1.41
SHANK2-213ENST00000460048 MARF1Q9Y4F3 1742 aaKnown RBP23.83■■□□□ 1.41
SHANK2-213ENST00000460048 TRPM1Q7Z4N2 1603 aa23.83■■□□□ 1.41
SHANK2-213ENST00000460048 EIF3AQ14152 1382 aaKnown RBP23.81■■□□□ 1.4
SHANK2-213ENST00000460048 WASLO00401 505 aaPredicted RBP23.81■■□□□ 1.4
SHANK2-213ENST00000460048 NEUROD1Q13562 356 aa23.81■■□□□ 1.4
SHANK2-213ENST00000460048 PRR36Q9H6K5 1346 aa23.8■■□□□ 1.4
SHANK2-213ENST00000460048 ITSN1Q15811 1721 aa23.79■■□□□ 1.4
SHANK2-213ENST00000460048 KRT28Q7Z3Y7 464 aa23.79■■□□□ 1.4
SHANK2-213ENST00000460048 AFF2P51816 1311 aa23.79■■□□□ 1.4
SHANK2-213ENST00000460048 SPATA31A3Q5VYP0 1347 aa23.79■■□□□ 1.4
SHANK2-213ENST00000460048 TRPM3Q9HCF6 1732 aaPredicted RBP23.77■■□□□ 1.4
SHANK2-213ENST00000460048 ADAMTS2O95450 1211 aa23.76■■□□□ 1.39
SHANK2-213ENST00000460048 C8orf37Q96NL8 207 aa23.76■■□□□ 1.39
SHANK2-213ENST00000460048 PMFBP1Q8TBY8 1022 aa23.75■■□□□ 1.39
SHANK2-213ENST00000460048 ATP7BP35670 1465 aa23.75■■□□□ 1.39
SHANK2-213ENST00000460048 QRICH2Q9H0J4 1663 aa23.74■■□□□ 1.39
SHANK2-213ENST00000460048 PSME1Q06323 249 aa23.74■■□□□ 1.39
SHANK2-213ENST00000460048 SBNO1A3KN83 1393 aa23.74■■□□□ 1.39
SHANK2-213ENST00000460048 TNS3Q68CZ2 1445 aa23.74■■□□□ 1.39
SHANK2-213ENST00000460048 TOPAZ1Q8N9V7 1692 aa23.73■■□□□ 1.39
SHANK2-213ENST00000460048 ABCA3Q99758 1704 aa23.73■■□□□ 1.39
SHANK2-213ENST00000460048 ALS2Q96Q42 1657 aa23.72■■□□□ 1.39
SHANK2-213ENST00000460048 NGLY1Q96IV0 654 aa23.71■■□□□ 1.39
SHANK2-213ENST00000460048 CDK19Q9BWU1 502 aa23.7■■□□□ 1.38
SHANK2-213ENST00000460048 CENPJQ9HC77 1338 aaPredicted RBP23.69■■□□□ 1.38
SHANK2-213ENST00000460048 NUDT16Q96DE0 195 aaKnown RBP23.69■■□□□ 1.38
SHANK2-213ENST00000460048 RXRBP28702 533 aa23.68■■□□□ 1.38
SHANK2-213ENST00000460048 FNBP4Q8N3X1 1017 aaPredicted RBP23.68■■□□□ 1.38
SHANK2-213ENST00000460048 CDK12Q9NYV4 1490 aaPredicted RBP23.68■■□□□ 1.38
SHANK2-213ENST00000460048 NBPF8Q3BBV2 869 aa23.67■■□□□ 1.38
SHANK2-213ENST00000460048 ARHGEF10O15013 1369 aa23.66■■□□□ 1.38
SHANK2-213ENST00000460048 QTRT2Q9H974 415 aaKnown RBP23.66■■□□□ 1.38
SHANK2-213ENST00000460048 ROCK2O75116 1388 aaKnown RBP23.65■■□□□ 1.38
SHANK2-213ENST00000460048 GPRASP1Q5JY77 1395 aa23.65■■□□□ 1.38
SHANK2-213ENST00000460048 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.65■■□□□ 1.38
SHANK2-213ENST00000460048 USP21Q9UK80 565 aa23.64■■□□□ 1.37
SHANK2-213ENST00000460048 CRYBG1Q9Y4K1 1723 aa23.64■■□□□ 1.37
SHANK2-213ENST00000460048 NGDNQ8NEJ9 315 aaKnown RBP23.63■■□□□ 1.37
SHANK2-213ENST00000460048 TONSLQ96HA7 1378 aa23.63■■□□□ 1.37
SHANK2-213ENST00000460048 RBM6P78332 1123 aaKnown RBP23.62■■□□□ 1.37
SHANK2-213ENST00000460048 CCDC61Q9Y6R9 512 aa23.62■■□□□ 1.37
SHANK2-213ENST00000460048 BCL9LQ86UU0 1499 aa23.62■■□□□ 1.37
SHANK2-213ENST00000460048 ATRNO75882 1429 aa23.61■■□□□ 1.37
SHANK2-213ENST00000460048 CABLES1Q8TDN4 633 aa23.61■■□□□ 1.37
SHANK2-213ENST00000460048 POLR3AO14802 1390 aaPredicted RBP23.61■■□□□ 1.37
SHANK2-213ENST00000460048 SLIT2O94813 1529 aa23.6■■□□□ 1.37
SHANK2-213ENST00000460048 LMOD2Q6P5Q4 547 aa23.6■■□□□ 1.37
SHANK2-213ENST00000460048 PLCH1Q4KWH8 1693 aa23.6■■□□□ 1.37
SHANK2-213ENST00000460048 PLEKHG3A1L390 1219 aa23.59■■□□□ 1.37
SHANK2-213ENST00000460048 TRPC5Q9UL62 973 aaPredicted RBP23.59■■□□□ 1.37
SHANK2-213ENST00000460048 NWD2Q9ULI1 1742 aa23.59■■□□□ 1.37
SHANK2-213ENST00000460048 RALGAPBQ86X10 1494 aa23.58■■□□□ 1.37
SHANK2-213ENST00000460048 RGS12O14924 1447 aa23.58■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms