RNA–Protein interactions for RNA: ENST00000459584.1

SNORD42A-201, Transcript of small nucleolar RNA, C/D box 42A, humanhuman

BASIC

Gene SNORD42A, Length 64 nt, Biotype snoRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD42A-201ENST00000459584 RSBN1LQ6PCB5 846 aaPredicted RBP8.48□□□□□ -1.05
SNORD42A-201ENST00000459584 RIC3Q7Z5B4 369 aa8.48□□□□□ -1.05
SNORD42A-201ENST00000459584 PRDM9Q9NQV7 894 aa8.48□□□□□ -1.05
SNORD42A-201ENST00000459584 SALL2Q9Y467 1007 aaPredicted RBP8.48□□□□□ -1.05
SNORD42A-201ENST00000459584 PCDHB15Q9Y5E8 787 aa8.48□□□□□ -1.05
SNORD42A-201ENST00000459584 CSPP1Q1MSJ5 1256 aa8.47□□□□□ -1.05
SNORD42A-201ENST00000459584 IL27Q8NEV9 243 aa8.47□□□□□ -1.05
SNORD42A-201ENST00000459584 POLR3EQ9NVU0 708 aa8.47□□□□□ -1.05
SNORD42A-201ENST00000459584 LIMD1Q9UGP4 676 aa8.47□□□□□ -1.05
SNORD42A-201ENST00000459584 RNF223E7ERA6 249 aa8.46□□□□□ -1.06
SNORD42A-201ENST00000459584 C6orf229H3BNL8 230 aa8.46□□□□□ -1.06
SNORD42A-201ENST00000459584 USB1Q9BQ65 265 aaKnown RBP8.46□□□□□ -1.06
SNORD42A-201ENST00000459584 SPTLC1O15269 473 aa8.45□□□□□ -1.06
SNORD42A-201ENST00000459584 GGCXP38435 758 aa8.45□□□□□ -1.06
SNORD42A-201ENST00000459584 DDRGK1Q96HY6 314 aa8.45□□□□□ -1.06
SNORD42A-201ENST00000459584 RSPH6AQ9H0K4 717 aa8.44□□□□□ -1.06
SNORD42A-201ENST00000459584 CABLES1Q8TDN4 633 aa8.43□□□□□ -1.06
SNORD42A-201ENST00000459584 CLK2P49760 499 aaKnown RBP8.42□□□□□ -1.06
SNORD42A-201ENST00000459584 MTMR2Q13614 643 aa8.42□□□□□ -1.06
SNORD42A-201ENST00000459584 MSS51Q4VC12 460 aa8.42□□□□□ -1.06
SNORD42A-201ENST00000459584 ATP1B4Q9UN42 357 aaPredicted RBP8.42□□□□□ -1.06
SNORD42A-201ENST00000459584 HRCP23327 699 aa8.41□□□□□ -1.06
SNORD42A-201ENST00000459584 GJA5P36382 358 aa8.41□□□□□ -1.06
SNORD42A-201ENST00000459584 QPCTQ16769 361 aa8.41□□□□□ -1.06
SNORD42A-201ENST00000459584 RETREG3Q86VR2 466 aa8.41□□□□□ -1.06
SNORD42A-201ENST00000459584 PROCA1Q8NCQ7 364 aaPredicted RBP8.41□□□□□ -1.06
SNORD42A-201ENST00000459584 SKIV2LQ15477 1246 aaKnown RBP8.4□□□□□ -1.06
SNORD42A-201ENST00000459584 PLA2G2CQ5R387 149 aa8.4□□□□□ -1.06
SNORD42A-201ENST00000459584 ANKLE1Q8NAG6 615 aa8.4□□□□□ -1.06
SNORD42A-201ENST00000459584 PRR7Q8TB68 274 aa8.4□□□□□ -1.06
SNORD42A-201ENST00000459584 EMID1Q96A84 441 aaPredicted RBP8.4□□□□□ -1.06
SNORD42A-201ENST00000459584 PRKD2Q9BZL6 878 aa8.4□□□□□ -1.06
SNORD42A-201ENST00000459584 FCF1Q9Y324 198 aaKnown RBP8.4□□□□□ -1.06
SNORD42A-201ENST00000459584 NUTM2BA6NNL0 878 aaPredicted RBP8.39□□□□□ -1.07
SNORD42A-201ENST00000459584 NUTM2EB1AL46 878 aaPredicted RBP8.39□□□□□ -1.07
SNORD42A-201ENST00000459584 SH3D19Q5HYK7 790 aa8.39□□□□□ -1.07
SNORD42A-201ENST00000459584 NUTM2DQ5VT03 806 aaPredicted RBP8.39□□□□□ -1.07
SNORD42A-201ENST00000459584 NUTM2AQ8IVF1 878 aaPredicted RBP8.39□□□□□ -1.07
SNORD42A-201ENST00000459584 ZBTB3Q9H5J0 574 aa8.39□□□□□ -1.07
SNORD42A-201ENST00000459584 DXOO77932 396 aaKnown RBP8.38□□□□□ -1.07
SNORD42A-201ENST00000459584 MMP16P51512 607 aa8.38□□□□□ -1.07
SNORD42A-201ENST00000459584 RTL5Q5HYW3 569 aaPredicted RBP8.38□□□□□ -1.07
SNORD42A-201ENST00000459584 FBXO31Q5XUX0 539 aaPredicted RBP8.38□□□□□ -1.07
SNORD42A-201ENST00000459584 CFAP99D6REC4 459 aa8.37□□□□□ -1.07
SNORD42A-201ENST00000459584 LILRB3O75022 631 aa8.37□□□□□ -1.07
SNORD42A-201ENST00000459584 JUNDP17535 347 aa8.37□□□□□ -1.07
SNORD42A-201ENST00000459584 PRPF38BQ5VTL8 546 aaKnown RBP8.37□□□□□ -1.07
SNORD42A-201ENST00000459584 LIAT1Q6ZQX7 453 aa8.37□□□□□ -1.07
SNORD42A-201ENST00000459584 CCDC24Q8N4L8 307 aa8.37□□□□□ -1.07
SNORD42A-201ENST00000459584 SPDYE5A6NIY4 337 aa8.36□□□□□ -1.07
SNORD42A-201ENST00000459584 RGS20O76081 388 aa8.36□□□□□ -1.07
SNORD42A-201ENST00000459584 TUSC1Q2TAM9 212 aa8.36□□□□□ -1.07
SNORD42A-201ENST00000459584 TSC1Q92574 1164 aa8.36□□□□□ -1.07
SNORD42A-201ENST00000459584 SLC19A1P41440 591 aa8.35□□□□□ -1.07
SNORD42A-201ENST00000459584 NUDT12Q9BQG2 462 aa8.33□□□□□ -1.08
SNORD42A-201ENST00000459584 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.33□□□□□ -1.08
SNORD42A-201ENST00000459584 PCMTD1Q96MG8 357 aaPredicted RBP8.32□□□□□ -1.08
SNORD42A-201ENST00000459584 V9GY48 417 aaPredicted RBP8.32□□□□□ -1.08
SNORD42A-201ENST00000459584 PER1O15534 1290 aaPredicted RBP8.31□□□□□ -1.08
SNORD42A-201ENST00000459584 SPRYD7Q5W111 196 aa8.31□□□□□ -1.08
SNORD42A-201ENST00000459584 PTCRAQ6ISU1 281 aaPredicted RBP8.31□□□□□ -1.08
SNORD42A-201ENST00000459584 ZBTB24O43167 697 aaPredicted RBP8.3□□□□□ -1.08
SNORD42A-201ENST00000459584 DESI1Q6ICB0 168 aa8.3□□□□□ -1.08
SNORD42A-201ENST00000459584 GOPCQ9HD26 462 aa8.3□□□□□ -1.08
SNORD42A-201ENST00000459584 CCNYL3P0C7X3 344 aa8.29□□□□□ -1.08
SNORD42A-201ENST00000459584 CTDSPL2Q05D32 466 aa8.29□□□□□ -1.08
SNORD42A-201ENST00000459584 PTPRNQ16849 979 aa8.29□□□□□ -1.08
SNORD42A-201ENST00000459584 LYPD8Q6UX82 237 aa8.29□□□□□ -1.08
SNORD42A-201ENST00000459584 PPP2R2DQ66LE6 453 aa8.28□□□□□ -1.08
SNORD42A-201ENST00000459584 ZNF598Q86UK7 904 aaKnown RBP8.28□□□□□ -1.08
SNORD42A-201ENST00000459584 EVA1BQ9NVM1 165 aa8.28□□□□□ -1.08
SNORD42A-201ENST00000459584 CD2BP2O95400 341 aaKnown RBP8.27□□□□□ -1.09
SNORD42A-201ENST00000459584 CTHP32929 405 aa8.27□□□□□ -1.09
SNORD42A-201ENST00000459584 RPIAP49247 311 aa8.27□□□□□ -1.09
SNORD42A-201ENST00000459584 ZNF697Q5TEC3 545 aa8.27□□□□□ -1.09
SNORD42A-201ENST00000459584 HELBQ8NG08 1087 aaPredicted RBP8.27□□□□□ -1.09
SNORD42A-201ENST00000459584 AP1G2O75843 785 aa8.26□□□□□ -1.09
SNORD42A-201ENST00000459584 RFC5P40937 340 aa8.26□□□□□ -1.09
SNORD42A-201ENST00000459584 KCNH2Q12809 1159 aa8.26□□□□□ -1.09
SNORD42A-201ENST00000459584 TRIM32Q13049 653 aa8.26□□□□□ -1.09
SNORD42A-201ENST00000459584 MAP10Q9P2G4 905 aa8.26□□□□□ -1.09
SNORD42A-201ENST00000459584 LRRN4Q8WUT4 740 aa8.25□□□□□ -1.09
SNORD42A-201ENST00000459584 FOXC1Q12948 553 aa8.24□□□□□ -1.09
SNORD42A-201ENST00000459584 TRIM67Q6ZTA4 783 aa8.24□□□□□ -1.09
SNORD42A-201ENST00000459584 UNC93B1Q9H1C4 597 aa8.24□□□□□ -1.09
SNORD42A-201ENST00000459584 TNFRSF10AO00220 468 aa8.23□□□□□ -1.09
SNORD42A-201ENST00000459584 F12P00748 615 aaPredicted RBP8.23□□□□□ -1.09
SNORD42A-201ENST00000459584 LINC01559Q495D7 138 aa8.23□□□□□ -1.09
SNORD42A-201ENST00000459584 IRX2Q9BZI1 471 aaPredicted RBP8.23□□□□□ -1.09
SNORD42A-201ENST00000459584 GFRA3O60609 400 aa8.22□□□□□ -1.09
SNORD42A-201ENST00000459584 BAP1Q92560 729 aa8.22□□□□□ -1.09
SNORD42A-201ENST00000459584 PDZRN3Q9UPQ7 1066 aa8.22□□□□□ -1.09
SNORD42A-201ENST00000459584 SKOR1P84550 965 aa8.21□□□□□ -1.1
SNORD42A-201ENST00000459584 PKD2L1Q9P0L9 805 aa8.21□□□□□ -1.1
SNORD42A-201ENST00000459584 GDF9O60383 454 aa8.2□□□□□ -1.1
SNORD42A-201ENST00000459584 USP17L8P0C7I0 530 aa8.2□□□□□ -1.1
SNORD42A-201ENST00000459584 SH3BP2P78314 561 aa8.19□□□□□ -1.1
SNORD42A-201ENST00000459584 NR6A1Q15406 480 aa8.19□□□□□ -1.1
SNORD42A-201ENST00000459584 HMX1Q9NP08 348 aaPredicted RBP8.19□□□□□ -1.1
SNORD42A-201ENST00000459584 TMEM259Q4ZIN3 620 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms