RNA–Protein interactions for RNA: ENST00000458397.1

GAPDHP53-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 53, humanhuman

BASIC

Gene GAPDHP53, Length 924 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP53-201ENST00000458397 RALGAPBQ86X10 1494 aa10.21□□□□□ -0.78
GAPDHP53-201ENST00000458397 ARHGEF28Q8N1W1 1705 aaKnown RBP10.21□□□□□ -0.78
GAPDHP53-201ENST00000458397 ADGRB2O60241 1585 aa10.2□□□□□ -0.78
GAPDHP53-201ENST00000458397 CADPS2Q86UW7 1296 aa10.2□□□□□ -0.78
GAPDHP53-201ENST00000458397 PRAM1Q96QH2 718 aa10.19□□□□□ -0.78
GAPDHP53-201ENST00000458397 SLAIN2Q9P270 581 aa10.19□□□□□ -0.78
GAPDHP53-201ENST00000458397 TRAK1Q9UPV9 953 aa10.19□□□□□ -0.78
GAPDHP53-201ENST00000458397 ROBO1Q9Y6N7 1651 aa10.18□□□□□ -0.78
GAPDHP53-201ENST00000458397 C1orf167Q5SNV9 1468 aa10.18□□□□□ -0.78
GAPDHP53-201ENST00000458397 PIP4K2BP78356 416 aa10.18□□□□□ -0.78
GAPDHP53-201ENST00000458397 C14orf37Q86TY3 774 aa10.18□□□□□ -0.78
GAPDHP53-201ENST00000458397 TIMELESSQ9UNS1 1208 aa10.18□□□□□ -0.78
GAPDHP53-201ENST00000458397 ATF3P18847 181 aa10.17□□□□□ -0.78
GAPDHP53-201ENST00000458397 CCER1Q8TC90 406 aaPredicted RBP10.17□□□□□ -0.78
GAPDHP53-201ENST00000458397 FMN2Q9NZ56 1722 aa10.16□□□□□ -0.78
GAPDHP53-201ENST00000458397 ROCK2O75116 1388 aaKnown RBP10.16□□□□□ -0.78
GAPDHP53-201ENST00000458397 AHDC1Q5TGY3 1603 aaPredicted RBP10.16□□□□□ -0.78
GAPDHP53-201ENST00000458397 HSPA1LP34931 641 aa10.16□□□□□ -0.78
GAPDHP53-201ENST00000458397 BRINP3Q76B58 766 aa10.16□□□□□ -0.78
GAPDHP53-201ENST00000458397 MED1Q15648 1581 aaPredicted RBP10.15□□□□□ -0.78
GAPDHP53-201ENST00000458397 USP32Q8NFA0 1604 aa10.15□□□□□ -0.79
GAPDHP53-201ENST00000458397 SAFB2Q14151 953 aaKnown RBP eCLIP10.14□□□□□ -0.79
GAPDHP53-201ENST00000458397 COL16A1Q07092 1604 aaPredicted RBP10.14□□□□□ -0.79
GAPDHP53-201ENST00000458397 SCAF1Q9H7N4 1312 aaKnown RBP10.13□□□□□ -0.79
GAPDHP53-201ENST00000458397 POGKQ9P215 609 aa10.13□□□□□ -0.79
GAPDHP53-201ENST00000458397 NHSL1Q5SYE7 1610 aa10.13□□□□□ -0.79
GAPDHP53-201ENST00000458397 ANKARQ7Z5J8 1434 aa10.13□□□□□ -0.79
GAPDHP53-201ENST00000458397 TULP4Q9NRJ4 1543 aa10.12□□□□□ -0.79
GAPDHP53-201ENST00000458397 MINK1Q8N4C8 1332 aaPredicted RBP10.12□□□□□ -0.79
GAPDHP53-201ENST00000458397 PRR36Q9H6K5 1346 aa10.12□□□□□ -0.79
GAPDHP53-201ENST00000458397 CENPJQ9HC77 1338 aaPredicted RBP10.12□□□□□ -0.79
GAPDHP53-201ENST00000458397 ATP7BP35670 1465 aa10.12□□□□□ -0.79
GAPDHP53-201ENST00000458397 ORAI2Q96SN7 254 aa10.12□□□□□ -0.79
GAPDHP53-201ENST00000458397 HIRIP3Q9BW71 556 aaPredicted RBP10.12□□□□□ -0.79
GAPDHP53-201ENST00000458397 SBNO2Q9Y2G9 1366 aa10.12□□□□□ -0.79
GAPDHP53-201ENST00000458397 WASLO00401 505 aaPredicted RBP10.11□□□□□ -0.79
GAPDHP53-201ENST00000458397 QRICH2Q9H0J4 1663 aa10.11□□□□□ -0.79
GAPDHP53-201ENST00000458397 CARD11Q9BXL7 1154 aa10.1□□□□□ -0.79
GAPDHP53-201ENST00000458397 PXDNQ92626 1479 aa10.1□□□□□ -0.79
GAPDHP53-201ENST00000458397 NUTM2FA1L443 756 aa10.09□□□□□ -0.79
GAPDHP53-201ENST00000458397 DDX17Q92841 729 aaKnown RBP10.09□□□□□ -0.79
GAPDHP53-201ENST00000458397 PHLPP1O60346 1717 aa10.09□□□□□ -0.79
GAPDHP53-201ENST00000458397 EIF3AQ14152 1382 aaKnown RBP10.09□□□□□ -0.79
GAPDHP53-201ENST00000458397 TOPAZ1Q8N9V7 1692 aa10.09□□□□□ -0.79
GAPDHP53-201ENST00000458397 SOS2Q07890 1332 aaPredicted RBP10.08□□□□□ -0.8
GAPDHP53-201ENST00000458397 TESK2Q96S53 571 aa10.08□□□□□ -0.8
GAPDHP53-201ENST00000458397 KIF1AQ12756 1690 aa10.08□□□□□ -0.8
GAPDHP53-201ENST00000458397 RGPD8O14715 1765 aaPredicted RBP10.07□□□□□ -0.8
GAPDHP53-201ENST00000458397 USP47Q96K76 1375 aa10.07□□□□□ -0.8
GAPDHP53-201ENST00000458397 ESCO1Q5FWF5 840 aa10.07□□□□□ -0.8
GAPDHP53-201ENST00000458397 CDK19Q9BWU1 502 aa10.07□□□□□ -0.8
GAPDHP53-201ENST00000458397 NUDT16Q96DE0 195 aaKnown RBP10.06□□□□□ -0.8
GAPDHP53-201ENST00000458397 PHF8Q9UPP1 1060 aa10.06□□□□□ -0.8
GAPDHP53-201ENST00000458397 NPHP3Q7Z494 1330 aa10.06□□□□□ -0.8
GAPDHP53-201ENST00000458397 POLR3AO14802 1390 aaPredicted RBP10.05□□□□□ -0.8
GAPDHP53-201ENST00000458397 PNPLA6Q8IY17 1366 aa10.05□□□□□ -0.8
GAPDHP53-201ENST00000458397 JCADQ9P266 1359 aa10.05□□□□□ -0.8
GAPDHP53-201ENST00000458397 FOXO3O43524 673 aa10.05□□□□□ -0.8
GAPDHP53-201ENST00000458397 SHPRHQ149N8 1683 aa10.05□□□□□ -0.8
GAPDHP53-201ENST00000458397 ST20-MTHFSA0A0A6YYL1 179 aa10.04□□□□□ -0.8
GAPDHP53-201ENST00000458397 PLEKHG3A1L390 1219 aa10.04□□□□□ -0.8
GAPDHP53-201ENST00000458397 CABP2Q9NPB3 220 aa10.04□□□□□ -0.8
GAPDHP53-201ENST00000458397 SRCAPQ6ZRS2 3230 aa10.04□□□□□ -0.8
GAPDHP53-201ENST00000458397 EVC2Q86UK5 1308 aa10.04□□□□□ -0.8
GAPDHP53-201ENST00000458397 LRP6O75581 1613 aa10.04□□□□□ -0.8
GAPDHP53-201ENST00000458397 ITSN1Q15811 1721 aa10.03□□□□□ -0.8
GAPDHP53-201ENST00000458397 TRPM3Q9HCF6 1732 aaPredicted RBP10.03□□□□□ -0.8
GAPDHP53-201ENST00000458397 CCDC61Q9Y6R9 512 aa10.03□□□□□ -0.8
GAPDHP53-201ENST00000458397 COL22A1Q8NFW1 1626 aaPredicted RBP10.03□□□□□ -0.8
GAPDHP53-201ENST00000458397 SBNO1A3KN83 1393 aa10.02□□□□□ -0.8
GAPDHP53-201ENST00000458397 PPIP5K1Q6PFW1 1433 aa10.02□□□□□ -0.81
GAPDHP53-201ENST00000458397 XPCQ01831 940 aaPredicted RBP10.02□□□□□ -0.81
GAPDHP53-201ENST00000458397 PMFBP1Q8TBY8 1022 aa10.02□□□□□ -0.81
GAPDHP53-201ENST00000458397 LRRC59Q96AG4 307 aaKnown RBP10.02□□□□□ -0.81
GAPDHP53-201ENST00000458397 SPATA31A3Q5VYP0 1347 aa10.02□□□□□ -0.81
GAPDHP53-201ENST00000458397 TNS3Q68CZ2 1445 aa10.01□□□□□ -0.81
GAPDHP53-201ENST00000458397 SSH2Q76I76 1423 aa10.01□□□□□ -0.81
GAPDHP53-201ENST00000458397 SRPK2P78362 688 aaKnown RBP10.01□□□□□ -0.81
GAPDHP53-201ENST00000458397 PUS7Q96PZ0 661 aaKnown RBP10.01□□□□□ -0.81
GAPDHP53-201ENST00000458397 CD163L1Q9NR16 1453 aa10.01□□□□□ -0.81
GAPDHP53-201ENST00000458397 ATAD2Q6PL18 1390 aa10.01□□□□□ -0.81
GAPDHP53-201ENST00000458397 ALS2Q96Q42 1657 aa10□□□□□ -0.81
GAPDHP53-201ENST00000458397 KRT28Q7Z3Y7 464 aa10□□□□□ -0.81
GAPDHP53-201ENST00000458397 ACEP12821 1306 aa10□□□□□ -0.81
GAPDHP53-201ENST00000458397 SPATA31A6Q5VVP1 1343 aa10□□□□□ -0.81
GAPDHP53-201ENST00000458397 CPSF1Q10570 1443 aaKnown RBP9.99□□□□□ -0.81
GAPDHP53-201ENST00000458397 CABP1Q9NZU7 370 aa9.99□□□□□ -0.81
GAPDHP53-201ENST00000458397 HSPA5P11021 654 aaKnown RBP9.98□□□□□ -0.81
GAPDHP53-201ENST00000458397 USP6P35125 1406 aa9.98□□□□□ -0.81
GAPDHP53-201ENST00000458397 NRKQ7Z2Y5 1582 aa9.97□□□□□ -0.81
GAPDHP53-201ENST00000458397 PSME1Q06323 249 aa9.97□□□□□ -0.81
GAPDHP53-201ENST00000458397 NGDNQ8NEJ9 315 aaKnown RBP9.97□□□□□ -0.81
GAPDHP53-201ENST00000458397 ARHGEF10O15013 1369 aa9.97□□□□□ -0.81
GAPDHP53-201ENST00000458397 BRD4O60885 1362 aaPredicted RBP9.97□□□□□ -0.81
GAPDHP53-201ENST00000458397 CRYBG1Q9Y4K1 1723 aa9.96□□□□□ -0.81
GAPDHP53-201ENST00000458397 EIF4G2P78344 907 aaKnown RBP eCLIP9.96□□□□□ -0.82
GAPDHP53-201ENST00000458397 RGS17Q9UGC6 210 aaPredicted RBP9.96□□□□□ -0.82
GAPDHP53-201ENST00000458397 NINLQ9Y2I6 1382 aa9.96□□□□□ -0.82
GAPDHP53-201ENST00000458397 ABCA3Q99758 1704 aa9.96□□□□□ -0.82
GAPDHP53-201ENST00000458397 AKAP12Q02952 1782 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms