RNA–Protein interactions for RNA: ENST00000457368.2

NEDD1-204, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 3,162 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-204ENST00000457368 ADGBQ8N7X0 1667 aa3.56□□□□□ -1.84
NEDD1-204ENST00000457368 JCADQ9P266 1359 aa3.56□□□□□ -1.84
NEDD1-204ENST00000457368 MICALL2Q8IY33 904 aa3.56□□□□□ -1.84
NEDD1-204ENST00000457368 MBD5Q9P267 1494 aa3.56□□□□□ -1.84
NEDD1-204ENST00000457368 SCAF11Q99590 1463 aaKnown RBP3.56□□□□□ -1.84
NEDD1-204ENST00000457368 RGL2O15211 777 aa3.56□□□□□ -1.84
NEDD1-204ENST00000457368 ARSIQ5FYB1 569 aa3.56□□□□□ -1.84
NEDD1-204ENST00000457368 SPNS2Q8IVW8 549 aa3.56□□□□□ -1.84
NEDD1-204ENST00000457368 CDC42BPAQ5VT25 1732 aa3.56□□□□□ -1.84
NEDD1-204ENST00000457368 ABCC3O15438 1527 aa3.56□□□□□ -1.84
NEDD1-204ENST00000457368 SPATA31A6Q5VVP1 1343 aa3.56□□□□□ -1.84
NEDD1-204ENST00000457368 ZNF772Q68DY9 489 aaPredicted RBP3.55□□□□□ -1.84
NEDD1-204ENST00000457368 NCOA3Q9Y6Q9 1424 aa3.55□□□□□ -1.84
NEDD1-204ENST00000457368 NCOA2Q15596 1464 aa3.55□□□□□ -1.84
NEDD1-204ENST00000457368 FBXO31Q5XUX0 539 aaPredicted RBP3.55□□□□□ -1.84
NEDD1-204ENST00000457368 GGT6Q6P531 493 aa3.55□□□□□ -1.84
NEDD1-204ENST00000457368 MAP3K1Q13233 1512 aa3.55□□□□□ -1.84
NEDD1-204ENST00000457368 NKTRP30414 1462 aaKnown RBP3.55□□□□□ -1.84
NEDD1-204ENST00000457368 NUDT7P0C024 238 aa3.55□□□□□ -1.84
NEDD1-204ENST00000457368 RSPH4AQ5TD94 716 aa3.55□□□□□ -1.84
NEDD1-204ENST00000457368 TMEM121BQ9BXQ6 578 aaPredicted RBP3.55□□□□□ -1.84
NEDD1-204ENST00000457368 ARHGAP31Q2M1Z3 1444 aa3.54□□□□□ -1.84
NEDD1-204ENST00000457368 KCNA6P17658 529 aa3.54□□□□□ -1.84
NEDD1-204ENST00000457368 ERVK-7P63135 1459 aa3.54□□□□□ -1.84
NEDD1-204ENST00000457368 NWD1Q149M9 1564 aa3.54□□□□□ -1.84
NEDD1-204ENST00000457368 RIMBP2O15034 1052 aa3.54□□□□□ -1.84
NEDD1-204ENST00000457368 CHGAP10645 457 aaKnown RBP3.54□□□□□ -1.84
NEDD1-204ENST00000457368 HNRNPMP52272 730 aaKnown RBP eCLIP3.54□□□□□ -1.84
NEDD1-204ENST00000457368 PRDM15P57071 1507 aaPredicted RBP3.54□□□□□ -1.84
NEDD1-204ENST00000457368 XIRP1Q702N8 1843 aaKnown RBP3.53□□□□□ -1.84
NEDD1-204ENST00000457368 MS4A4AQ96JQ5 239 aa3.53□□□□□ -1.84
NEDD1-204ENST00000457368 KRTAP3-3Q9BYR6 98 aa3.53□□□□□ -1.84
NEDD1-204ENST00000457368 KRTAP3-2Q9BYR7 98 aa3.53□□□□□ -1.84
NEDD1-204ENST00000457368 TMEM94Q12767 1356 aa3.53□□□□□ -1.84
NEDD1-204ENST00000457368 FYCO1Q9BQS8 1478 aa3.53□□□□□ -1.84
NEDD1-204ENST00000457368 SETD1AO15047 1707 aaKnown RBP3.53□□□□□ -1.84
NEDD1-204ENST00000457368 VGFO15240 615 aaPredicted RBP3.53□□□□□ -1.84
NEDD1-204ENST00000457368 LRRIQ1Q96JM4 1722 aa3.53□□□□□ -1.84
NEDD1-204ENST00000457368 LRP6O75581 1613 aa3.53□□□□□ -1.84
NEDD1-204ENST00000457368 CFDP1Q9UEE9 299 aaPredicted RBP3.53□□□□□ -1.85
NEDD1-204ENST00000457368 COL16A1Q07092 1604 aaPredicted RBP3.53□□□□□ -1.85
NEDD1-204ENST00000457368 AHDC1Q5TGY3 1603 aaPredicted RBP3.53□□□□□ -1.85
NEDD1-204ENST00000457368 ROBO1Q9Y6N7 1651 aa3.52□□□□□ -1.85
NEDD1-204ENST00000457368 WASHC2CQ9Y4E1 1318 aa3.52□□□□□ -1.85
NEDD1-204ENST00000457368 C2orf72A6NCS6 295 aa3.52□□□□□ -1.85
NEDD1-204ENST00000457368 HOXB3P14651 431 aaPredicted RBP3.52□□□□□ -1.85
NEDD1-204ENST00000457368 TET3O43151 1660 aa3.52□□□□□ -1.85
NEDD1-204ENST00000457368 KDM5AP29375 1690 aaKnown RBP3.52□□□□□ -1.85
NEDD1-204ENST00000457368 CCNB3Q8WWL7 1395 aa3.52□□□□□ -1.85
NEDD1-204ENST00000457368 CHRM1P11229 460 aaPredicted RBP3.52□□□□□ -1.85
NEDD1-204ENST00000457368 RXRBP28702 533 aa3.52□□□□□ -1.85
NEDD1-204ENST00000457368 LTKP29376 864 aa3.52□□□□□ -1.85
NEDD1-204ENST00000457368 DOK7Q18PE1 504 aa3.52□□□□□ -1.85
NEDD1-204ENST00000457368 TIAM1Q13009 1591 aa3.52□□□□□ -1.85
NEDD1-204ENST00000457368 UBR1Q8IWV7 1749 aa3.52□□□□□ -1.85
NEDD1-204ENST00000457368 CCDC141Q6ZP82 1450 aa3.52□□□□□ -1.85
NEDD1-204ENST00000457368 TMEM2Q9UHN6 1383 aa3.52□□□□□ -1.85
NEDD1-204ENST00000457368 KIF3BO15066 747 aa3.51□□□□□ -1.85
NEDD1-204ENST00000457368 SHPRHQ149N8 1683 aa3.51□□□□□ -1.85
NEDD1-204ENST00000457368 CEP162Q5TB80 1403 aa3.51□□□□□ -1.85
NEDD1-204ENST00000457368 TXNDC2Q86VQ3 553 aa3.51□□□□□ -1.85
NEDD1-204ENST00000457368 ARHGEF5Q12774 1597 aa3.51□□□□□ -1.85
NEDD1-204ENST00000457368 EIF2AK4Q9P2K8 1649 aaKnown RBP3.51□□□□□ -1.85
NEDD1-204ENST00000457368 SLAIN2Q9P270 581 aa3.51□□□□□ -1.85
NEDD1-204ENST00000457368 DIP2AQ14689 1571 aa3.5□□□□□ -1.85
NEDD1-204ENST00000457368 MAST1Q9Y2H9 1570 aa3.5□□□□□ -1.85
NEDD1-204ENST00000457368 MSH6P52701 1360 aa3.5□□□□□ -1.85
NEDD1-204ENST00000457368 SETD5Q9C0A6 1442 aa3.5□□□□□ -1.85
NEDD1-204ENST00000457368 CCDC125Q86Z20 511 aa3.5□□□□□ -1.85
NEDD1-204ENST00000457368 MFRPQ9BY79 579 aa3.5□□□□□ -1.85
NEDD1-204ENST00000457368 ZNF777Q9ULD5 760 aaPredicted RBP3.5□□□□□ -1.85
NEDD1-204ENST00000457368 ATP1B4Q9UN42 357 aaPredicted RBP3.5□□□□□ -1.85
NEDD1-204ENST00000457368 EID1Q9Y6B2 187 aa3.5□□□□□ -1.85
NEDD1-204ENST00000457368 MROH1Q8NDA8 1641 aa3.5□□□□□ -1.85
NEDD1-204ENST00000457368 RGS12O14924 1447 aa3.5□□□□□ -1.85
NEDD1-204ENST00000457368 PPP1R37O75864 691 aa3.5□□□□□ -1.85
NEDD1-204ENST00000457368 RBM6P78332 1123 aaKnown RBP3.5□□□□□ -1.85
NEDD1-204ENST00000457368 PHLPP1O60346 1717 aa3.5□□□□□ -1.85
NEDD1-204ENST00000457368 RANGAP1P46060 587 aaPredicted RBP3.49□□□□□ -1.85
NEDD1-204ENST00000457368 NLRP6P59044 892 aa3.49□□□□□ -1.85
NEDD1-204ENST00000457368 TMC2Q8TDI7 906 aa3.49□□□□□ -1.85
NEDD1-204ENST00000457368 ATAD2Q6PL18 1390 aa3.49□□□□□ -1.85
NEDD1-204ENST00000457368 PROSER2Q86WR7 435 aaPredicted RBP3.49□□□□□ -1.85
NEDD1-204ENST00000457368 RNF166Q96A37 237 aaPredicted RBP3.49□□□□□ -1.85
NEDD1-204ENST00000457368 PIK3R4Q99570 1358 aa3.49□□□□□ -1.85
NEDD1-204ENST00000457368 DCCP43146 1447 aa3.49□□□□□ -1.85
NEDD1-204ENST00000457368 LMTK2Q8IWU2 1503 aa3.49□□□□□ -1.85
NEDD1-204ENST00000457368 LRP5O75197 1615 aa3.49□□□□□ -1.85
NEDD1-204ENST00000457368 TRIM52Q96A61 297 aa3.49□□□□□ -1.85
NEDD1-204ENST00000457368 EHBP1L1Q8N3D4 1523 aa3.49□□□□□ -1.85
NEDD1-204ENST00000457368 NOS1P29475 1434 aa3.48□□□□□ -1.85
NEDD1-204ENST00000457368 EFCAB6Q5THR3 1501 aa3.48□□□□□ -1.85
NEDD1-204ENST00000457368 ZNF644Q9H582 1327 aaPredicted RBP3.48□□□□□ -1.85
NEDD1-204ENST00000457368 MTUS2Q5JR59 1369 aa3.48□□□□□ -1.85
NEDD1-204ENST00000457368 PLEKHG1Q9ULL1 1385 aa3.48□□□□□ -1.85
NEDD1-204ENST00000457368 AFF2P51816 1311 aa3.48□□□□□ -1.85
NEDD1-204ENST00000457368 HOXB1P14653 301 aaPredicted RBP3.48□□□□□ -1.85
NEDD1-204ENST00000457368 CADPS2Q86UW7 1296 aa3.48□□□□□ -1.85
NEDD1-204ENST00000457368 TBX22Q9Y458 520 aa3.48□□□□□ -1.85
NEDD1-204ENST00000457368 SETBP1Q9Y6X0 1596 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms