RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 PLEKHH1Q9ULM0 1364 aa23.62■■□□□ 1.37
CPSF6-203ENST00000456847 STAC3Q96MF2 364 aa23.59■■□□□ 1.37
CPSF6-203ENST00000456847 FMN2Q9NZ56 1722 aa23.58■■□□□ 1.36
CPSF6-203ENST00000456847 ADGRB1O14514 1584 aa23.58■■□□□ 1.36
CPSF6-203ENST00000456847 DDX17Q92841 729 aaKnown RBP23.57■■□□□ 1.36
CPSF6-203ENST00000456847 DLC1Q96QB1 1528 aa23.56■■□□□ 1.36
CPSF6-203ENST00000456847 ORAI2Q96SN7 254 aa23.56■■□□□ 1.36
CPSF6-203ENST00000456847 SPATA31A6Q5VVP1 1343 aa23.56■■□□□ 1.36
CPSF6-203ENST00000456847 SIRT1Q96EB6 747 aa23.55■■□□□ 1.36
CPSF6-203ENST00000456847 NUTM2FA1L443 756 aa23.53■■□□□ 1.36
CPSF6-203ENST00000456847 SAFB2Q14151 953 aaKnown RBP eCLIP23.53■■□□□ 1.36
CPSF6-203ENST00000456847 PRAM1Q96QH2 718 aa23.53■■□□□ 1.36
CPSF6-203ENST00000456847 POGKQ9P215 609 aa23.53■■□□□ 1.36
CPSF6-203ENST00000456847 ESCO1Q5FWF5 840 aa23.53■■□□□ 1.36
CPSF6-203ENST00000456847 LRP6O75581 1613 aa23.52■■□□□ 1.36
CPSF6-203ENST00000456847 MEX3CQ5U5Q3 659 aaKnown RBP23.52■■□□□ 1.36
CPSF6-203ENST00000456847 LRRC59Q96AG4 307 aaKnown RBP23.52■■□□□ 1.36
CPSF6-203ENST00000456847 TRAK1Q9UPV9 953 aa23.51■■□□□ 1.35
CPSF6-203ENST00000456847 KIAA1210Q9ULL0 1709 aa23.5■■□□□ 1.35
CPSF6-203ENST00000456847 KIF1AQ12756 1690 aa23.49■■□□□ 1.35
CPSF6-203ENST00000456847 NUTM2BA6NNL0 878 aaPredicted RBP23.49■■□□□ 1.35
CPSF6-203ENST00000456847 NUTM2EB1AL46 878 aaPredicted RBP23.49■■□□□ 1.35
CPSF6-203ENST00000456847 SOCS7O14512 581 aa23.49■■□□□ 1.35
CPSF6-203ENST00000456847 TRIM26Q12899 539 aaPredicted RBP23.49■■□□□ 1.35
CPSF6-203ENST00000456847 NUTM2AQ8IVF1 878 aaPredicted RBP23.49■■□□□ 1.35
CPSF6-203ENST00000456847 ARHGEF28Q8N1W1 1705 aaKnown RBP23.48■■□□□ 1.35
CPSF6-203ENST00000456847 RGPD8O14715 1765 aaPredicted RBP23.48■■□□□ 1.35
CPSF6-203ENST00000456847 RGS17Q9UGC6 210 aaPredicted RBP23.47■■□□□ 1.35
CPSF6-203ENST00000456847 ADGRB2O60241 1585 aa23.47■■□□□ 1.35
CPSF6-203ENST00000456847 PNPLA6Q8IY17 1366 aa23.47■■□□□ 1.35
CPSF6-203ENST00000456847 NPHP3Q7Z494 1330 aa23.46■■□□□ 1.35
CPSF6-203ENST00000456847 SOS2Q07890 1332 aaPredicted RBP23.45■■□□□ 1.35
CPSF6-203ENST00000456847 SIN3AQ96ST3 1273 aa23.43■■□□□ 1.34
CPSF6-203ENST00000456847 NEUROD1Q13562 356 aa23.43■■□□□ 1.34
CPSF6-203ENST00000456847 MINK1Q8N4C8 1332 aaPredicted RBP23.42■■□□□ 1.34
CPSF6-203ENST00000456847 PXDNQ92626 1479 aa23.42■■□□□ 1.34
CPSF6-203ENST00000456847 FOXO3O43524 673 aa23.41■■□□□ 1.34
CPSF6-203ENST00000456847 XPCQ01831 940 aaPredicted RBP23.41■■□□□ 1.34
CPSF6-203ENST00000456847 HIRIP3Q9BW71 556 aaPredicted RBP23.41■■□□□ 1.34
CPSF6-203ENST00000456847 USP32Q8NFA0 1604 aa23.4■■□□□ 1.34
CPSF6-203ENST00000456847 POTEAQ6S8J7 498 aa23.39■■□□□ 1.33
CPSF6-203ENST00000456847 L3MBTL2Q969R5 705 aa23.39■■□□□ 1.33
CPSF6-203ENST00000456847 COL22A1Q8NFW1 1626 aaPredicted RBP23.38■■□□□ 1.33
CPSF6-203ENST00000456847 ANKARQ7Z5J8 1434 aa23.38■■□□□ 1.33
CPSF6-203ENST00000456847 EIF3AQ14152 1382 aaKnown RBP23.38■■□□□ 1.33
CPSF6-203ENST00000456847 PHF8Q9UPP1 1060 aa23.37■■□□□ 1.33
CPSF6-203ENST00000456847 TULP4Q9NRJ4 1543 aa23.36■■□□□ 1.33
CPSF6-203ENST00000456847 NBPF1Q3BBV0 1214 aa23.35■■□□□ 1.33
CPSF6-203ENST00000456847 ZNF772Q68DY9 489 aaPredicted RBP23.35■■□□□ 1.33
CPSF6-203ENST00000456847 TRPM1Q7Z4N2 1603 aa23.33■■□□□ 1.33
CPSF6-203ENST00000456847 ADAMTS2O95450 1211 aa23.33■■□□□ 1.32
CPSF6-203ENST00000456847 C8orf37Q96NL8 207 aa23.33■■□□□ 1.32
CPSF6-203ENST00000456847 ITSN1Q15811 1721 aa23.33■■□□□ 1.32
CPSF6-203ENST00000456847 WASLO00401 505 aaPredicted RBP23.32■■□□□ 1.32
CPSF6-203ENST00000456847 KRT28Q7Z3Y7 464 aa23.31■■□□□ 1.32
CPSF6-203ENST00000456847 AFF2P51816 1311 aa23.31■■□□□ 1.32
CPSF6-203ENST00000456847 PMFBP1Q8TBY8 1022 aa23.3■■□□□ 1.32
CPSF6-203ENST00000456847 MARF1Q9Y4F3 1742 aaKnown RBP23.29■■□□□ 1.32
CPSF6-203ENST00000456847 PSME1Q06323 249 aa23.29■■□□□ 1.32
CPSF6-203ENST00000456847 QRICH2Q9H0J4 1663 aa23.29■■□□□ 1.32
CPSF6-203ENST00000456847 TNS3Q68CZ2 1445 aa23.28■■□□□ 1.32
CPSF6-203ENST00000456847 SPATA31A3Q5VYP0 1347 aa23.28■■□□□ 1.32
CPSF6-203ENST00000456847 PRR36Q9H6K5 1346 aa23.28■■□□□ 1.32
CPSF6-203ENST00000456847 NGLY1Q96IV0 654 aa23.26■■□□□ 1.31
CPSF6-203ENST00000456847 TONSLQ96HA7 1378 aa23.26■■□□□ 1.31
CPSF6-203ENST00000456847 ATP7BP35670 1465 aa23.25■■□□□ 1.31
CPSF6-203ENST00000456847 ROCK2O75116 1388 aaKnown RBP23.25■■□□□ 1.31
CPSF6-203ENST00000456847 CENPJQ9HC77 1338 aaPredicted RBP23.24■■□□□ 1.31
CPSF6-203ENST00000456847 LMOD2Q6P5Q4 547 aa23.23■■□□□ 1.31
CPSF6-203ENST00000456847 SBNO1A3KN83 1393 aa23.23■■□□□ 1.31
CPSF6-203ENST00000456847 GPRASP1Q5JY77 1395 aa23.23■■□□□ 1.31
CPSF6-203ENST00000456847 TRPM3Q9HCF6 1732 aaPredicted RBP23.23■■□□□ 1.31
CPSF6-203ENST00000456847 CDK19Q9BWU1 502 aa23.23■■□□□ 1.31
CPSF6-203ENST00000456847 TOPAZ1Q8N9V7 1692 aa23.23■■□□□ 1.31
CPSF6-203ENST00000456847 NGDNQ8NEJ9 315 aaKnown RBP23.21■■□□□ 1.31
CPSF6-203ENST00000456847 NUDT16Q96DE0 195 aaKnown RBP23.21■■□□□ 1.31
CPSF6-203ENST00000456847 ABCA3Q99758 1704 aa23.21■■□□□ 1.31
CPSF6-203ENST00000456847 PLEKHG5O94827 1062 aa23.21■■□□□ 1.31
CPSF6-203ENST00000456847 HAP1P54257 671 aaPredicted RBP23.21■■□□□ 1.31
CPSF6-203ENST00000456847 ARHGEF10O15013 1369 aa23.2■■□□□ 1.31
CPSF6-203ENST00000456847 RXRBP28702 533 aa23.2■■□□□ 1.3
CPSF6-203ENST00000456847 USP21Q9UK80 565 aa23.18■■□□□ 1.3
CPSF6-203ENST00000456847 ALS2Q96Q42 1657 aa23.18■■□□□ 1.3
CPSF6-203ENST00000456847 SRPK2P78362 688 aaKnown RBP23.17■■□□□ 1.3
CPSF6-203ENST00000456847 NBPF8Q3BBV2 869 aa23.17■■□□□ 1.3
CPSF6-203ENST00000456847 QTRT2Q9H974 415 aaKnown RBP23.17■■□□□ 1.3
CPSF6-203ENST00000456847 PAK3O75914 559 aaPredicted RBP23.14■■□□□ 1.3
CPSF6-203ENST00000456847 CABLES1Q8TDN4 633 aa23.14■■□□□ 1.3
CPSF6-203ENST00000456847 CCDC61Q9Y6R9 512 aa23.14■■□□□ 1.29
CPSF6-203ENST00000456847 CDK12Q9NYV4 1490 aaPredicted RBP23.13■■□□□ 1.29
CPSF6-203ENST00000456847 FNBP4Q8N3X1 1017 aaPredicted RBP23.13■■□□□ 1.29
CPSF6-203ENST00000456847 RALGAPBQ86X10 1494 aa23.12■■□□□ 1.29
CPSF6-203ENST00000456847 RBM6P78332 1123 aaKnown RBP23.12■■□□□ 1.29
CPSF6-203ENST00000456847 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.12■■□□□ 1.29
CPSF6-203ENST00000456847 CABP2Q9NPB3 220 aa23.12■■□□□ 1.29
CPSF6-203ENST00000456847 TRPC5Q9UL62 973 aaPredicted RBP23.12■■□□□ 1.29
CPSF6-203ENST00000456847 PPIP5K1Q6PFW1 1433 aa23.11■■□□□ 1.29
CPSF6-203ENST00000456847 PLCH1Q4KWH8 1693 aa23.11■■□□□ 1.29
CPSF6-203ENST00000456847 ACEP12821 1306 aa23.1■■□□□ 1.29
CPSF6-203ENST00000456847 CARD11Q9BXL7 1154 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms