RNA–Protein interactions for RNA: ENST00000454323.1

CUL3-208, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-208ENST00000454323 BRICD5Q6PL45 260 aa11.62□□□□□ -0.55
CUL3-208ENST00000454323 FAM160A2Q8N612 972 aaPredicted RBP11.62□□□□□ -0.55
CUL3-208ENST00000454323 WIPF1O43516 503 aa11.61□□□□□ -0.55
CUL3-208ENST00000454323 KIFC2Q96AC6 838 aa11.6□□□□□ -0.55
CUL3-208ENST00000454323 DACH1Q9UI36 760 aa11.59□□□□□ -0.55
CUL3-208ENST00000454323 TESPA1A2RU30 521 aaPredicted RBP11.57□□□□□ -0.56
CUL3-208ENST00000454323 TRIM32Q13049 653 aa11.57□□□□□ -0.56
CUL3-208ENST00000454323 FECHP22830 423 aa11.56□□□□□ -0.56
CUL3-208ENST00000454323 NFX1Q12986 1120 aaKnown RBP11.56□□□□□ -0.56
CUL3-208ENST00000454323 ATP13A2Q9NQ11 1180 aa11.56□□□□□ -0.56
CUL3-208ENST00000454323 PRDM9Q9NQV7 894 aa11.56□□□□□ -0.56
CUL3-208ENST00000454323 FAM181BA6NEQ2 426 aa11.54□□□□□ -0.56
CUL3-208ENST00000454323 MMP16P51512 607 aa11.54□□□□□ -0.56
CUL3-208ENST00000454323 RBM26Q5T8P6 1007 aaKnown RBP11.54□□□□□ -0.56
CUL3-208ENST00000454323 TRIM47Q96LD4 638 aa11.54□□□□□ -0.56
CUL3-208ENST00000454323 SMPD1P17405 629 aa11.53□□□□□ -0.56
CUL3-208ENST00000454323 RNF19BQ6ZMZ0 732 aa11.52□□□□□ -0.57
CUL3-208ENST00000454323 TERTO14746 1132 aaKnown RBP11.51□□□□□ -0.57
CUL3-208ENST00000454323 WNT7BP56706 349 aa11.5□□□□□ -0.57
CUL3-208ENST00000454323 USP46P62068 366 aa11.5□□□□□ -0.57
CUL3-208ENST00000454323 SLC16A10Q8TF71 515 aa11.5□□□□□ -0.57
CUL3-208ENST00000454323 MRGPRX2Q96LB1 330 aa11.5□□□□□ -0.57
CUL3-208ENST00000454323 USB1Q9BQ65 265 aaKnown RBP11.5□□□□□ -0.57
CUL3-208ENST00000454323 GPR37O15354 613 aa11.48□□□□□ -0.57
CUL3-208ENST00000454323 DXOO77932 396 aaKnown RBP11.48□□□□□ -0.57
CUL3-208ENST00000454323 GPIHBP1Q8IV16 184 aa11.46□□□□□ -0.57
CUL3-208ENST00000454323 KDM4AO75164 1064 aa11.45□□□□□ -0.58
CUL3-208ENST00000454323 J3QL48 77 aa11.44□□□□□ -0.58
CUL3-208ENST00000454323 CD46P15529 392 aa11.44□□□□□ -0.58
CUL3-208ENST00000454323 NLRP7Q8WX94 980 aa11.44□□□□□ -0.58
CUL3-208ENST00000454323 SNRPBP14678 240 aaKnown RBP11.43□□□□□ -0.58
CUL3-208ENST00000454323 RC3H1Q5TC82 1133 aaKnown RBP11.43□□□□□ -0.58
CUL3-208ENST00000454323 CCDC24Q8N4L8 307 aa11.43□□□□□ -0.58
CUL3-208ENST00000454323 NPAS3Q8IXF0 933 aa11.42□□□□□ -0.58
CUL3-208ENST00000454323 HPS1Q92902 700 aa11.4□□□□□ -0.58
CUL3-208ENST00000454323 PHOX2BQ99453 314 aa11.4□□□□□ -0.58
CUL3-208ENST00000454323 TULP1O00294 542 aaPredicted RBP11.39□□□□□ -0.59
CUL3-208ENST00000454323 ALDH1A1P00352 501 aa11.37□□□□□ -0.59
CUL3-208ENST00000454323 MAP2K5Q13163 448 aa11.37□□□□□ -0.59
CUL3-208ENST00000454323 NXF1Q9UBU9 619 aaKnown RBP11.37□□□□□ -0.59
CUL3-208ENST00000454323 JUNDP17535 347 aa11.36□□□□□ -0.59
CUL3-208ENST00000454323 IRF7Q92985 503 aa11.36□□□□□ -0.59
CUL3-208ENST00000454323 WASF2Q9Y6W5 498 aa11.35□□□□□ -0.59
CUL3-208ENST00000454323 EHBP1Q8NDI1 1231 aa11.34□□□□□ -0.59
CUL3-208ENST00000454323 HOXA2O43364 376 aa11.33□□□□□ -0.6
CUL3-208ENST00000454323 SKOR1P84550 965 aa11.32□□□□□ -0.6
CUL3-208ENST00000454323 CAPN5O15484 640 aaPredicted RBP11.31□□□□□ -0.6
CUL3-208ENST00000454323 RETREG3Q86VR2 466 aa11.31□□□□□ -0.6
CUL3-208ENST00000454323 NUDT12Q9BQG2 462 aa11.31□□□□□ -0.6
CUL3-208ENST00000454323 PLCB2Q00722 1185 aa11.3□□□□□ -0.6
CUL3-208ENST00000454323 ZSCAN1Q8NBB4 408 aa11.29□□□□□ -0.6
CUL3-208ENST00000454323 CLCN1P35523 988 aa11.28□□□□□ -0.6
CUL3-208ENST00000454323 MDM2Q00987 491 aaPredicted RBP11.28□□□□□ -0.6
CUL3-208ENST00000454323 NUTM1Q86Y26 1132 aa11.28□□□□□ -0.6
CUL3-208ENST00000454323 MINK1Q8N4C8 1332 aaPredicted RBP11.28□□□□□ -0.6
CUL3-208ENST00000454323 IRF6O14896 467 aa11.27□□□□□ -0.61
CUL3-208ENST00000454323 PLEKHG3A1L390 1219 aa11.26□□□□□ -0.61
CUL3-208ENST00000454323 GPCPD1Q9NPB8 672 aa11.26□□□□□ -0.61
CUL3-208ENST00000454323 SIAH2O43255 324 aa11.25□□□□□ -0.61
CUL3-208ENST00000454323 LCE2CQ5TA81 110 aa11.25□□□□□ -0.61
CUL3-208ENST00000454323 KRI1Q8N9T8 703 aaKnown RBP11.25□□□□□ -0.61
CUL3-208ENST00000454323 CCNYL3P0C7X3 344 aa11.24□□□□□ -0.61
CUL3-208ENST00000454323 H3BM21 787 aa11.23□□□□□ -0.61
CUL3-208ENST00000454323 MS4A1P11836 297 aa11.23□□□□□ -0.61
CUL3-208ENST00000454323 GMPRP36959 345 aa11.23□□□□□ -0.61
CUL3-208ENST00000454323 BMP1P13497 986 aa11.21□□□□□ -0.61
CUL3-208ENST00000454323 SCARF1Q14162 830 aa11.21□□□□□ -0.61
CUL3-208ENST00000454323 TRIM46Q7Z4K8 759 aa11.21□□□□□ -0.61
CUL3-208ENST00000454323 HLA-CQ95604 372 aa11.21□□□□□ -0.61
CUL3-208ENST00000454323 PTPRNQ16849 979 aa11.2□□□□□ -0.62
CUL3-208ENST00000454323 MPNDQ8N594 471 aa11.2□□□□□ -0.62
CUL3-208ENST00000454323 C6orf229H3BNL8 230 aa11.19□□□□□ -0.62
CUL3-208ENST00000454323 FDX1P10109 184 aa11.19□□□□□ -0.62
CUL3-208ENST00000454323 FAM217BQ9NTX9 383 aaPredicted RBP11.19□□□□□ -0.62
CUL3-208ENST00000454323 VARSP26640 1264 aaKnown RBP11.18□□□□□ -0.62
CUL3-208ENST00000454323 SH3BP2P78314 561 aa11.18□□□□□ -0.62
CUL3-208ENST00000454323 GUCA2AQ02747 115 aa11.17□□□□□ -0.62
CUL3-208ENST00000454323 SPDYE5A6NIY4 337 aa11.16□□□□□ -0.62
CUL3-208ENST00000454323 PTCRAQ6ISU1 281 aaPredicted RBP11.16□□□□□ -0.62
CUL3-208ENST00000454323 CCDC102AQ96A19 550 aa11.16□□□□□ -0.62
CUL3-208ENST00000454323 UNC93B1Q9H1C4 597 aa11.16□□□□□ -0.62
CUL3-208ENST00000454323 SYMPKQ92797 1274 aaKnown RBP11.15□□□□□ -0.62
CUL3-208ENST00000454323 ZFP42Q96MM3 310 aa11.15□□□□□ -0.62
CUL3-208ENST00000454323 ADH1CP00326 375 aa11.14□□□□□ -0.63
CUL3-208ENST00000454323 EVA1BQ9NVM1 165 aa11.14□□□□□ -0.63
CUL3-208ENST00000454323 NNTQ13423 1086 aa11.13□□□□□ -0.63
CUL3-208ENST00000454323 MRPL14Q6P1L8 145 aaKnown RBP11.13□□□□□ -0.63
CUL3-208ENST00000454323 KCNH2Q12809 1159 aa11.12□□□□□ -0.63
CUL3-208ENST00000454323 DESI1Q6ICB0 168 aa11.12□□□□□ -0.63
CUL3-208ENST00000454323 ZNF511Q8NB15 262 aa11.11□□□□□ -0.63
CUL3-208ENST00000454323 FAM174AQ8TBP5 190 aa11.11□□□□□ -0.63
CUL3-208ENST00000454323 VEGFBP49765 207 aa11.1□□□□□ -0.63
CUL3-208ENST00000454323 HAP1P54257 671 aaPredicted RBP11.1□□□□□ -0.63
CUL3-208ENST00000454323 VSIG8P0DPA2 414 aa11.09□□□□□ -0.63
CUL3-208ENST00000454323 LINC01559Q495D7 138 aa11.09□□□□□ -0.63
CUL3-208ENST00000454323 TLL2Q9Y6L7 1015 aa11.09□□□□□ -0.63
CUL3-208ENST00000454323 LORP23490 312 aaPredicted RBP11.08□□□□□ -0.64
CUL3-208ENST00000454323 WDR4P57081 412 aaKnown RBP11.08□□□□□ -0.64
CUL3-208ENST00000454323 BAP1Q92560 729 aa11.08□□□□□ -0.64
CUL3-208ENST00000454323 ERBB4Q15303 1308 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms