RNA–Protein interactions for RNA: ENST00000453034.5

RAPH1-210, Transcript of Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPH1, Length 2,394 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1-210ENST00000453034 IQSEC2Q5JU85 1478 aa27.8■■■□□ 2.04
RAPH1-210ENST00000453034 ABCC3O15438 1527 aa27.8■■■□□ 2.04
RAPH1-210ENST00000453034 GGT6Q6P531 493 aa27.79■■■□□ 2.04
RAPH1-210ENST00000453034 USP35Q9P2H5 1018 aa27.78■■■□□ 2.04
RAPH1-210ENST00000453034 CD109Q6YHK3 1445 aa27.78■■■□□ 2.04
RAPH1-210ENST00000453034 RPGRIP1LQ68CZ1 1315 aa27.78■■■□□ 2.04
RAPH1-210ENST00000453034 NEFMP07197 916 aa27.78■■■□□ 2.04
RAPH1-210ENST00000453034 PDE3AQ14432 1141 aa27.77■■■□□ 2.04
RAPH1-210ENST00000453034 SIGLEC1Q9BZZ2 1709 aa27.77■■■□□ 2.04
RAPH1-210ENST00000453034 PPM1GO15355 546 aaPredicted RBP27.76■■■□□ 2.03
RAPH1-210ENST00000453034 TNNT2P45379 298 aaPredicted RBP27.76■■■□□ 2.03
RAPH1-210ENST00000453034 NINLQ9Y2I6 1382 aa27.76■■■□□ 2.03
RAPH1-210ENST00000453034 RGS3P49796 1198 aa27.75■■■□□ 2.03
RAPH1-210ENST00000453034 GLI2P10070 1586 aa27.75■■■□□ 2.03
RAPH1-210ENST00000453034 CGNL1Q0VF96 1302 aa27.75■■■□□ 2.03
RAPH1-210ENST00000453034 RUNDC1Q96C34 613 aa27.74■■■□□ 2.03
RAPH1-210ENST00000453034 PHF23Q9BUL5 403 aaPredicted RBP27.74■■■□□ 2.03
RAPH1-210ENST00000453034 CAMSAP1Q5T5Y3 1602 aa27.74■■■□□ 2.03
RAPH1-210ENST00000453034 IGHDP01880 384 aa27.74■■■□□ 2.03
RAPH1-210ENST00000453034 PIK3C2BO00750 1634 aa27.73■■■□□ 2.03
RAPH1-210ENST00000453034 ARHGEF28Q8N1W1 1705 aaKnown RBP27.72■■■□□ 2.03
RAPH1-210ENST00000453034 TULP4Q9NRJ4 1543 aa27.72■■■□□ 2.03
RAPH1-210ENST00000453034 TCP11L2Q8N4U5 519 aa27.71■■■□□ 2.03
RAPH1-210ENST00000453034 RRP7AQ9Y3A4 280 aaKnown RBP27.71■■■□□ 2.03
RAPH1-210ENST00000453034 PANK1Q8TE04 598 aa27.7■■■□□ 2.02
RAPH1-210ENST00000453034 NEXMIFQ5QGS0 1516 aa27.69■■■□□ 2.02
RAPH1-210ENST00000453034 NPM1P06748 294 aaKnown RBP eCLIP27.69■■■□□ 2.02
RAPH1-210ENST00000453034 MTHFSP49914 203 aa27.69■■■□□ 2.02
RAPH1-210ENST00000453034 NEUROD2Q15784 382 aa27.69■■■□□ 2.02
RAPH1-210ENST00000453034 VIRMAQ69YN4 1812 aaKnown RBP27.69■■■□□ 2.02
RAPH1-210ENST00000453034 CLUAP1Q96AJ1 413 aa27.68■■■□□ 2.02
RAPH1-210ENST00000453034 SLC4A3P48751 1232 aa27.67■■■□□ 2.02
RAPH1-210ENST00000453034 PUS7Q96PZ0 661 aaKnown RBP27.67■■■□□ 2.02
RAPH1-210ENST00000453034 COG6Q9Y2V7 657 aa27.67■■■□□ 2.02
RAPH1-210ENST00000453034 RARSP54136 660 aaKnown RBP27.66■■■□□ 2.02
RAPH1-210ENST00000453034 ANKRD36BQ8N2N9 1353 aa27.66■■■□□ 2.02
RAPH1-210ENST00000453034 WDR63Q8IWG1 891 aa27.65■■■□□ 2.02
RAPH1-210ENST00000453034 EVC2Q86UK5 1308 aa27.64■■■□□ 2.02
RAPH1-210ENST00000453034 CANXP27824 592 aaKnown RBP27.64■■■□□ 2.02
RAPH1-210ENST00000453034 NUTM2DQ5VT03 806 aaPredicted RBP27.64■■■□□ 2.01
RAPH1-210ENST00000453034 CCDC27Q2M243 656 aa27.63■■■□□ 2.01
RAPH1-210ENST00000453034 NSD2O96028 1365 aa27.63■■■□□ 2.01
RAPH1-210ENST00000453034 VGFO15240 615 aaPredicted RBP27.62■■■□□ 2.01
RAPH1-210ENST00000453034 CFAP53Q96M91 514 aa27.62■■■□□ 2.01
RAPH1-210ENST00000453034 FRAT1Q92837 279 aaPredicted RBP27.61■■■□□ 2.01
RAPH1-210ENST00000453034 DIP2CQ9Y2E4 1556 aa27.6■■■□□ 2.01
RAPH1-210ENST00000453034 ADGRB2O60241 1585 aa27.59■■■□□ 2.01
RAPH1-210ENST00000453034 RAPGEF3O95398 923 aa27.58■■■□□ 2.01
RAPH1-210ENST00000453034 NEO1Q92859 1461 aa27.57■■■□□ 2
RAPH1-210ENST00000453034 RLBP1P12271 317 aa27.57■■■□□ 2
RAPH1-210ENST00000453034 NCBP3Q53F19 620 aaKnown RBP27.57■■■□□ 2
RAPH1-210ENST00000453034 ARHGAP31Q2M1Z3 1444 aa27.57■■■□□ 2
RAPH1-210ENST00000453034 CABP2Q9NPB3 220 aa27.57■■■□□ 2
RAPH1-210ENST00000453034 DAXXQ9UER7 740 aaPredicted RBP27.57■■■□□ 2
RAPH1-210ENST00000453034 TNNQ9UQP3 1299 aa27.57■■■□□ 2
RAPH1-210ENST00000453034 NFKBIBQ15653 356 aa27.56■■■□□ 2
RAPH1-210ENST00000453034 USP19O94966 1318 aa27.56■■■□□ 2
RAPH1-210ENST00000453034 MAPK8IP3Q9UPT6 1336 aa27.56■■■□□ 2
RAPH1-210ENST00000453034 AAMPQ13685 434 aa27.54■■■□□ 2
RAPH1-210ENST00000453034 ZFYVE9O95405 1425 aa27.54■■■□□ 2
RAPH1-210ENST00000453034 IDI1Q13907 227 aa27.53■■■□□ 2
RAPH1-210ENST00000453034 BCL2L13Q9BXK5 485 aa27.52■■■□□ 2
RAPH1-210ENST00000453034 PCDHB15Q9Y5E8 787 aa27.52■■■□□ 2
RAPH1-210ENST00000453034 ABCC11Q96J66 1382 aa27.52■■■□□ 2
RAPH1-210ENST00000453034 U2AF1L5P0DN76 240 aaPredicted RBP27.52■■■□□ 2
RAPH1-210ENST00000453034 U2AF1Q01081 240 aaKnown RBP eCLIP27.52■■■□□ 2
RAPH1-210ENST00000453034 A0A1W2PP64 1363 aa27.52■■■□□ 2
RAPH1-210ENST00000453034 MYO5BQ9ULV0 1848 aa27.5■■□□□ 1.99
RAPH1-210ENST00000453034 SAFB2Q14151 953 aaKnown RBP eCLIP27.5■■□□□ 1.99
RAPH1-210ENST00000453034 PMFBP1Q8TBY8 1022 aa27.5■■□□□ 1.99
RAPH1-210ENST00000453034 MYH16Q9H6N6 1097 aa27.5■■□□□ 1.99
RAPH1-210ENST00000453034 RICTORQ6R327 1708 aa27.49■■□□□ 1.99
RAPH1-210ENST00000453034 SEC24BO95487 1268 aa27.49■■□□□ 1.99
RAPH1-210ENST00000453034 COL3A1P02461 1466 aaPredicted RBP27.48■■□□□ 1.99
RAPH1-210ENST00000453034 PTPRMP28827 1452 aa27.47■■□□□ 1.99
RAPH1-210ENST00000453034 NLRP1Q9C000 1473 aa27.47■■□□□ 1.99
RAPH1-210ENST00000453034 TMEM131LA2VDJ0 1609 aa27.45■■□□□ 1.98
RAPH1-210ENST00000453034 PLEKHF1Q96S99 279 aa27.45■■□□□ 1.98
RAPH1-210ENST00000453034 SLC52A1Q9NWF4 448 aa27.45■■□□□ 1.98
RAPH1-210ENST00000453034 ANKRD26Q9UPS8 1709 aa27.44■■□□□ 1.98
RAPH1-210ENST00000453034 STK26Q9P289 416 aa27.44■■□□□ 1.98
RAPH1-210ENST00000453034 PREX1Q8TCU6 1659 aa27.43■■□□□ 1.98
RAPH1-210ENST00000453034 ZMYM3Q14202 1370 aa27.43■■□□□ 1.98
RAPH1-210ENST00000453034 GGNBP2Q9H3C7 697 aa27.43■■□□□ 1.98
RAPH1-210ENST00000453034 YEATS2Q9ULM3 1422 aa27.43■■□□□ 1.98
RAPH1-210ENST00000453034 CD163L1Q9NR16 1453 aa27.43■■□□□ 1.98
RAPH1-210ENST00000453034 CLTCQ00610 1675 aaKnown RBP27.42■■□□□ 1.98
RAPH1-210ENST00000453034 SRPK2P78362 688 aaKnown RBP27.42■■□□□ 1.98
RAPH1-210ENST00000453034 MVPQ14764 893 aaKnown RBP27.41■■□□□ 1.98
RAPH1-210ENST00000453034 MED14O60244 1454 aa27.4■■□□□ 1.98
RAPH1-210ENST00000453034 TSR2Q969E8 191 aaKnown RBP27.4■■□□□ 1.98
RAPH1-210ENST00000453034 PDZRN3Q9UPQ7 1066 aa27.4■■□□□ 1.98
RAPH1-210ENST00000453034 CT47B1P0C2W7 299 aaPredicted RBP27.4■■□□□ 1.98
RAPH1-210ENST00000453034 GSE1Q14687 1217 aa27.4■■□□□ 1.98
RAPH1-210ENST00000453034 SENP3Q9H4L4 574 aaPredicted RBP27.4■■□□□ 1.98
RAPH1-210ENST00000453034 ATAD2Q6PL18 1390 aa27.39■■□□□ 1.98
RAPH1-210ENST00000453034 TMPOP42166 694 aaKnown RBP27.38■■□□□ 1.97
RAPH1-210ENST00000453034 ZKSCAN2Q63HK3 967 aa27.38■■□□□ 1.97
RAPH1-210ENST00000453034 TRIM35Q9UPQ4 493 aa27.38■■□□□ 1.97
RAPH1-210ENST00000453034 FYB1O15117 783 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms