RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 WAPLQ7Z5K2 1190 aa15.58■□□□□ 0.08
VTA1-203ENST00000452973 CGNL1Q0VF96 1302 aa15.58■□□□□ 0.08
VTA1-203ENST00000452973 PLEKHH1Q9ULM0 1364 aa15.58■□□□□ 0.08
VTA1-203ENST00000452973 ZFYVE9O95405 1425 aa15.58■□□□□ 0.08
VTA1-203ENST00000452973 ZMYM3Q14202 1370 aa15.57■□□□□ 0.08
VTA1-203ENST00000452973 AGLP35573 1532 aa15.57■□□□□ 0.08
VTA1-203ENST00000452973 YTHDC2Q9H6S0 1430 aaKnown RBP15.57■□□□□ 0.08
VTA1-203ENST00000452973 TULP4Q9NRJ4 1543 aa15.56■□□□□ 0.08
VTA1-203ENST00000452973 NEUROD2Q15784 382 aa15.56■□□□□ 0.08
VTA1-203ENST00000452973 ARHGEF28Q8N1W1 1705 aaKnown RBP15.56■□□□□ 0.08
VTA1-203ENST00000452973 RBM19Q9Y4C8 960 aaKnown RBP15.56■□□□□ 0.08
VTA1-203ENST00000452973 MTHFSP49914 203 aa15.55■□□□□ 0.08
VTA1-203ENST00000452973 EXOC6Q8TAG9 804 aa15.55■□□□□ 0.08
VTA1-203ENST00000452973 CDK19Q9BWU1 502 aa15.55■□□□□ 0.08
VTA1-203ENST00000452973 GGNBP2Q9H3C7 697 aa15.55■□□□□ 0.08
VTA1-203ENST00000452973 RIMS2Q9UQ26 1411 aa15.54■□□□□ 0.08
VTA1-203ENST00000452973 CEBPAP49715 358 aaPredicted RBP15.54■□□□□ 0.08
VTA1-203ENST00000452973 A2ML1A8K2U0 1454 aa15.54■□□□□ 0.08
VTA1-203ENST00000452973 TRHP20396 242 aaPredicted RBP15.54■□□□□ 0.08
VTA1-203ENST00000452973 GOLGA2Q08379 1002 aa15.54■□□□□ 0.08
VTA1-203ENST00000452973 ANKRD36BQ8N2N9 1353 aa15.52■□□□□ 0.08
VTA1-203ENST00000452973 REREQ9P2R6 1566 aa15.52■□□□□ 0.08
VTA1-203ENST00000452973 ARHGEF40Q8TER5 1519 aa15.52■□□□□ 0.08
VTA1-203ENST00000452973 ALKQ9UM73 1620 aa15.52■□□□□ 0.08
VTA1-203ENST00000452973 MYT1Q01538 1121 aa15.52■□□□□ 0.08
VTA1-203ENST00000452973 RRP7AQ9Y3A4 280 aaKnown RBP15.52■□□□□ 0.08
VTA1-203ENST00000452973 CABP1Q9NZU7 370 aa15.52■□□□□ 0.07
VTA1-203ENST00000452973 INSRP06213 1382 aa15.52■□□□□ 0.07
VTA1-203ENST00000452973 PTPRMP28827 1452 aa15.51■□□□□ 0.07
VTA1-203ENST00000452973 A0A1W2PP64 1363 aa15.51■□□□□ 0.07
VTA1-203ENST00000452973 TXNDC2Q86VQ3 553 aa15.51■□□□□ 0.07
VTA1-203ENST00000452973 DUSP27Q5VZP5 1158 aa15.5■□□□□ 0.07
VTA1-203ENST00000452973 SPINK5Q9NQ38 1064 aaPredicted RBP15.5■□□□□ 0.07
VTA1-203ENST00000452973 TERF2IPQ9NYB0 399 aa15.5■□□□□ 0.07
VTA1-203ENST00000452973 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.49■□□□□ 0.07
VTA1-203ENST00000452973 PUS7Q96PZ0 661 aaKnown RBP15.49■□□□□ 0.07
VTA1-203ENST00000452973 CFAP53Q96M91 514 aa15.49■□□□□ 0.07
VTA1-203ENST00000452973 SPATA31D1Q6ZQQ2 1576 aa15.49■□□□□ 0.07
VTA1-203ENST00000452973 DMRT2Q9Y5R5 561 aa15.48■□□□□ 0.07
VTA1-203ENST00000452973 POLR3AO14802 1390 aaPredicted RBP15.48■□□□□ 0.07
VTA1-203ENST00000452973 HDGFL2Q7Z4V5 671 aaPredicted RBP15.47■□□□□ 0.07
VTA1-203ENST00000452973 TNRQ92752 1358 aa15.47■□□□□ 0.07
VTA1-203ENST00000452973 U2AF1L5P0DN76 240 aaPredicted RBP15.47■□□□□ 0.07
VTA1-203ENST00000452973 U2AF1Q01081 240 aaKnown RBP eCLIP15.47■□□□□ 0.07
VTA1-203ENST00000452973 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.47■□□□□ 0.07
VTA1-203ENST00000452973 ZNF521Q96K83 1311 aa15.47■□□□□ 0.07
VTA1-203ENST00000452973 ATAD2Q6PL18 1390 aa15.47■□□□□ 0.07
VTA1-203ENST00000452973 METP08581 1390 aa15.46■□□□□ 0.07
VTA1-203ENST00000452973 U2SURPO15042 1029 aaKnown RBP15.46■□□□□ 0.07
VTA1-203ENST00000452973 SLFN5Q08AF3 891 aa15.46■□□□□ 0.07
VTA1-203ENST00000452973 C20orf194Q5TEA3 1177 aa15.46■□□□□ 0.07
VTA1-203ENST00000452973 FYB1O15117 783 aa15.46■□□□□ 0.06
VTA1-203ENST00000452973 PPM1GO15355 546 aaPredicted RBP15.46■□□□□ 0.06
VTA1-203ENST00000452973 FBLN1P23142 703 aa15.45■□□□□ 0.06
VTA1-203ENST00000452973 HDGFP51858 240 aaKnown RBP15.45■□□□□ 0.06
VTA1-203ENST00000452973 CRBNQ96SW2 442 aa15.45■□□□□ 0.06
VTA1-203ENST00000452973 TCP11L2Q8N4U5 519 aa15.44■□□□□ 0.06
VTA1-203ENST00000452973 NCKAP5LQ9HCH0 1330 aa15.44■□□□□ 0.06
VTA1-203ENST00000452973 NUTM2FA1L443 756 aa15.44■□□□□ 0.06
VTA1-203ENST00000452973 WWC1Q8IX03 1113 aa15.43■□□□□ 0.06
VTA1-203ENST00000452973 RUNDC1Q96C34 613 aa15.43■□□□□ 0.06
VTA1-203ENST00000452973 SLC26A8Q96RN1 970 aa15.42■□□□□ 0.06
VTA1-203ENST00000452973 ABCC11Q96J66 1382 aa15.42■□□□□ 0.06
VTA1-203ENST00000452973 NINLQ9Y2I6 1382 aa15.41■□□□□ 0.06
VTA1-203ENST00000452973 NSD2O96028 1365 aa15.4■□□□□ 0.06
VTA1-203ENST00000452973 E9PSI1 815 aa15.4■□□□□ 0.06
VTA1-203ENST00000452973 LTKP29376 864 aa15.4■□□□□ 0.06
VTA1-203ENST00000452973 BCAR3O75815 825 aa15.4■□□□□ 0.06
VTA1-203ENST00000452973 WASLO00401 505 aaPredicted RBP15.4■□□□□ 0.06
VTA1-203ENST00000452973 TMEM2Q9UHN6 1383 aa15.39■□□□□ 0.05
VTA1-203ENST00000452973 CD163L1Q9NR16 1453 aa15.39■□□□□ 0.05
VTA1-203ENST00000452973 NUDT16Q96DE0 195 aaKnown RBP15.37■□□□□ 0.05
VTA1-203ENST00000452973 TRMT2AQ8IZ69 625 aaKnown RBP15.37■□□□□ 0.05
VTA1-203ENST00000452973 ZRANB1Q9UGI0 708 aa15.36■□□□□ 0.05
VTA1-203ENST00000452973 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.36■□□□□ 0.05
VTA1-203ENST00000452973 USP32Q8NFA0 1604 aa15.36■□□□□ 0.05
VTA1-203ENST00000452973 SHPRHQ149N8 1683 aa15.36■□□□□ 0.05
VTA1-203ENST00000452973 NKTRP30414 1462 aaKnown RBP15.35■□□□□ 0.05
VTA1-203ENST00000452973 NME9Q86XW9 330 aa15.35■□□□□ 0.05
VTA1-203ENST00000452973 EID1Q9Y6B2 187 aa15.35■□□□□ 0.05
VTA1-203ENST00000452973 SKAP1Q86WV1 359 aa15.35■□□□□ 0.05
VTA1-203ENST00000452973 PPIP5K1Q6PFW1 1433 aa15.35■□□□□ 0.05
VTA1-203ENST00000452973 CANXP27824 592 aaKnown RBP15.34■□□□□ 0.05
VTA1-203ENST00000452973 NRXN3Q9Y4C0 1643 aa15.34■□□□□ 0.05
VTA1-203ENST00000452973 NGEFQ8N5V2 710 aa15.34■□□□□ 0.05
VTA1-203ENST00000452973 FRAT1Q92837 279 aaPredicted RBP15.34■□□□□ 0.05
VTA1-203ENST00000452973 DIAPH1O60610 1272 aaKnown RBP15.34■□□□□ 0.05
VTA1-203ENST00000452973 BCL2L13Q9BXK5 485 aa15.33■□□□□ 0.04
VTA1-203ENST00000452973 CCDC61Q9Y6R9 512 aa15.33■□□□□ 0.04
VTA1-203ENST00000452973 ROBO2Q9HCK4 1378 aa15.33■□□□□ 0.04
VTA1-203ENST00000452973 MAPK8IP3Q9UPT6 1336 aa15.33■□□□□ 0.04
VTA1-203ENST00000452973 DLC1Q96QB1 1528 aa15.32■□□□□ 0.04
VTA1-203ENST00000452973 SETD1AO15047 1707 aaKnown RBP15.32■□□□□ 0.04
VTA1-203ENST00000452973 EMILIN1Q9Y6C2 1016 aa15.31■□□□□ 0.04
VTA1-203ENST00000452973 POLKQ9UBT6 870 aa15.31■□□□□ 0.04
VTA1-203ENST00000452973 NLRP1Q9C000 1473 aa15.3■□□□□ 0.04
VTA1-203ENST00000452973 UBR1Q8IWV7 1749 aa15.3■□□□□ 0.04
VTA1-203ENST00000452973 HMOX1P09601 288 aa15.3■□□□□ 0.04
VTA1-203ENST00000452973 RRS1Q15050 365 aaKnown RBP15.3■□□□□ 0.04
VTA1-203ENST00000452973 TSR2Q969E8 191 aaKnown RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms