RNA–Protein interactions for RNA: ENST00000452950.1

CSTF1-204, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 3

Gene CSTF1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-204ENST00000452950 TSR3Q9UJK0 312 aaKnown RBP10.55□□□□□ -0.72
CSTF1-204ENST00000452950 PNMA3Q9UL41 463 aa10.55□□□□□ -0.72
CSTF1-204ENST00000452950 HPS5Q9UPZ3 1129 aa10.55□□□□□ -0.72
CSTF1-204ENST00000452950 NUDT18Q6ZVK8 323 aa10.54□□□□□ -0.72
CSTF1-204ENST00000452950 SHROOM4Q9ULL8 1493 aa10.54□□□□□ -0.72
CSTF1-204ENST00000452950 NBPF26B4DH59 902 aa10.53□□□□□ -0.72
CSTF1-204ENST00000452950 BRD1O95696 1058 aa10.53□□□□□ -0.72
CSTF1-204ENST00000452950 ABL2P42684 1182 aa10.53□□□□□ -0.72
CSTF1-204ENST00000452950 PPP2R2DQ66LE6 453 aa10.53□□□□□ -0.72
CSTF1-204ENST00000452950 SAMD7Q7Z3H4 446 aa10.53□□□□□ -0.72
CSTF1-204ENST00000452950 MTMR14Q8NCE2 650 aa10.53□□□□□ -0.72
CSTF1-204ENST00000452950 TBC1D2Q9BYX2 928 aa10.53□□□□□ -0.72
CSTF1-204ENST00000452950 RBM27Q9P2N5 1060 aaKnown RBP10.53□□□□□ -0.72
CSTF1-204ENST00000452950 METTL3Q86U44 580 aaKnown RBP10.52□□□□□ -0.73
CSTF1-204ENST00000452950 OATP04181 439 aa10.51□□□□□ -0.73
CSTF1-204ENST00000452950 PPP4CP60510 307 aa10.51□□□□□ -0.73
CSTF1-204ENST00000452950 PADI6Q6TGC4 694 aa10.51□□□□□ -0.73
CSTF1-204ENST00000452950 TTC13Q8NBP0 860 aa10.51□□□□□ -0.73
CSTF1-204ENST00000452950 PBXIP1Q96AQ6 731 aa10.51□□□□□ -0.73
CSTF1-204ENST00000452950 USTQ9Y2C2 406 aa10.51□□□□□ -0.73
CSTF1-204ENST00000452950 POM121CA8CG34 1229 aa10.5□□□□□ -0.73
CSTF1-204ENST00000452950 SOCS7O14512 581 aa10.5□□□□□ -0.73
CSTF1-204ENST00000452950 ITGBL1O95965 494 aaPredicted RBP10.5□□□□□ -0.73
CSTF1-204ENST00000452950 FBXO31Q5XUX0 539 aaPredicted RBP10.49□□□□□ -0.73
CSTF1-204ENST00000452950 NLRP7Q8WX94 980 aa10.49□□□□□ -0.73
CSTF1-204ENST00000452950 LIMD1Q9UGP4 676 aa10.49□□□□□ -0.73
CSTF1-204ENST00000452950 CECR2Q9BXF3 1484 aa10.49□□□□□ -0.73
CSTF1-204ENST00000452950 A0A0G2JS52 829 aa10.48□□□□□ -0.73
CSTF1-204ENST00000452950 CSB-PGBD3P0DP91 1061 aa10.48□□□□□ -0.73
CSTF1-204ENST00000452950 HDGFP51858 240 aaKnown RBP10.48□□□□□ -0.73
CSTF1-204ENST00000452950 FAM161AQ3B820 660 aa10.47□□□□□ -0.73
CSTF1-204ENST00000452950 RIC3Q7Z5B4 369 aa10.46□□□□□ -0.73
CSTF1-204ENST00000452950 TBC1D2BQ9UPU7 963 aa10.46□□□□□ -0.73
CSTF1-204ENST00000452950 CC2D2AQ9P2K1 1620 aa10.45□□□□□ -0.74
CSTF1-204ENST00000452950 KCNC4Q03721 635 aa10.45□□□□□ -0.74
CSTF1-204ENST00000452950 PXYLP1Q8TE99 480 aa10.45□□□□□ -0.74
CSTF1-204ENST00000452950 AMOTL2Q9Y2J4 779 aa10.45□□□□□ -0.74
CSTF1-204ENST00000452950 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.43□□□□□ -0.74
CSTF1-204ENST00000452950 CCDC27Q2M243 656 aa10.43□□□□□ -0.74
CSTF1-204ENST00000452950 TUSC1Q2TAM9 212 aa10.43□□□□□ -0.74
CSTF1-204ENST00000452950 EYA1Q99502 592 aa10.43□□□□□ -0.74
CSTF1-204ENST00000452950 BICRAQ9NZM4 1560 aa10.43□□□□□ -0.74
CSTF1-204ENST00000452950 RNF40O75150 1001 aa10.42□□□□□ -0.74
CSTF1-204ENST00000452950 RGS20O76081 388 aa10.42□□□□□ -0.74
CSTF1-204ENST00000452950 SWT1Q5T5J6 900 aaKnown RBP10.42□□□□□ -0.74
CSTF1-204ENST00000452950 ADGRG1Q9Y653 693 aa10.42□□□□□ -0.74
CSTF1-204ENST00000452950 RFX1P22670 979 aa10.41□□□□□ -0.74
CSTF1-204ENST00000452950 HDGFL1Q5TGJ6 251 aa10.4□□□□□ -0.74
CSTF1-204ENST00000452950 SPIRE2Q8WWL2 714 aa10.4□□□□□ -0.74
CSTF1-204ENST00000452950 AP1G2O75843 785 aa10.39□□□□□ -0.75
CSTF1-204ENST00000452950 IVNS1ABPQ9Y6Y0 642 aa10.39□□□□□ -0.75
CSTF1-204ENST00000452950 SPTLC1O15269 473 aa10.38□□□□□ -0.75
CSTF1-204ENST00000452950 TJAP1Q5JTD0 557 aa10.38□□□□□ -0.75
CSTF1-204ENST00000452950 CFAP70Q5T0N1 1121 aa10.38□□□□□ -0.75
CSTF1-204ENST00000452950 SND1Q7KZF4 910 aaKnown RBP eCLIP10.38□□□□□ -0.759e-6■■■■□ 21.9
CSTF1-204ENST00000452950 NACADO15069 1562 aa10.38□□□□□ -0.75
CSTF1-204ENST00000452950 CSPP1Q1MSJ5 1256 aa10.37□□□□□ -0.75
CSTF1-204ENST00000452950 RSBN1LQ6PCB5 846 aaPredicted RBP10.37□□□□□ -0.75
CSTF1-204ENST00000452950 USP17L8P0C7I0 530 aa10.36□□□□□ -0.75
CSTF1-204ENST00000452950 APLP1P51693 650 aa10.36□□□□□ -0.75
CSTF1-204ENST00000452950 SRPK2P78362 688 aaKnown RBP10.36□□□□□ -0.75
CSTF1-204ENST00000452950 SLF2Q8IX21 1173 aa10.36□□□□□ -0.75
CSTF1-204ENST00000452950 ADAMTS19Q8TE59 1207 aa10.36□□□□□ -0.75
CSTF1-204ENST00000452950 NDUFB9Q9Y6M9 179 aa10.36□□□□□ -0.75
CSTF1-204ENST00000452950 WASHC4Q2M389 1173 aa10.35□□□□□ -0.75
CSTF1-204ENST00000452950 RBM46Q8TBY0 533 aaKnown RBP10.35□□□□□ -0.75
CSTF1-204ENST00000452950 MTRQ99707 1265 aa10.35□□□□□ -0.75
CSTF1-204ENST00000452950 NUTM1Q86Y26 1132 aa10.34□□□□□ -0.75
CSTF1-204ENST00000452950 PPP1R12CQ9BZL4 782 aa10.34□□□□□ -0.75
CSTF1-204ENST00000452950 CARNS1A5YM72 827 aa10.33□□□□□ -0.76
CSTF1-204ENST00000452950 LILRB3O75022 631 aa10.33□□□□□ -0.76
CSTF1-204ENST00000452950 SLC4A3P48751 1232 aa10.33□□□□□ -0.76
CSTF1-204ENST00000452950 QPCTQ16769 361 aa10.33□□□□□ -0.76
CSTF1-204ENST00000452950 IL21Q9HBE4 155 aa10.33□□□□□ -0.76
CSTF1-204ENST00000452950 DNAJB2P25686 324 aa10.32□□□□□ -0.76
CSTF1-204ENST00000452950 GJA5P36382 358 aa10.32□□□□□ -0.76
CSTF1-204ENST00000452950 ZNF516Q92618 1163 aa10.32□□□□□ -0.76
CSTF1-204ENST00000452950 VRTNQ9H8Y1 702 aa10.32□□□□□ -0.76
CSTF1-204ENST00000452950 RCCD1A6NED2 376 aa10.31□□□□□ -0.76
CSTF1-204ENST00000452950 CD46P15529 392 aa10.31□□□□□ -0.76
CSTF1-204ENST00000452950 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.3□□□□□ -0.76
CSTF1-204ENST00000452950 MOXD2PA6NHM9 499 aa10.3□□□□□ -0.76
CSTF1-204ENST00000452950 NUTM2BA6NNL0 878 aaPredicted RBP10.3□□□□□ -0.76
CSTF1-204ENST00000452950 NUTM2EB1AL46 878 aaPredicted RBP10.3□□□□□ -0.76
CSTF1-204ENST00000452950 RTL5Q5HYW3 569 aaPredicted RBP10.3□□□□□ -0.76
CSTF1-204ENST00000452950 NUTM2DQ5VT03 806 aaPredicted RBP10.3□□□□□ -0.76
CSTF1-204ENST00000452950 NUTM2AQ8IVF1 878 aaPredicted RBP10.3□□□□□ -0.76
CSTF1-204ENST00000452950 GJD4Q96KN9 370 aaPredicted RBP10.3□□□□□ -0.76
CSTF1-204ENST00000452950 TMEM134Q9H6X4 195 aa10.3□□□□□ -0.76
CSTF1-204ENST00000452950 PALM3A6NDB9 673 aaPredicted RBP10.28□□□□□ -0.76
CSTF1-204ENST00000452950 LMOD1P29536 600 aaPredicted RBP10.28□□□□□ -0.76
CSTF1-204ENST00000452950 SULF1Q8IWU6 871 aa10.28□□□□□ -0.76
CSTF1-204ENST00000452950 COPS2P61201 443 aa10.27□□□□□ -0.77
CSTF1-204ENST00000452950 IRX2Q9BZI1 471 aaPredicted RBP10.27□□□□□ -0.77
CSTF1-204ENST00000452950 USP35Q9P2H5 1018 aa10.27□□□□□ -0.77
CSTF1-204ENST00000452950 PCDHB15Q9Y5E8 787 aa10.27□□□□□ -0.77
CSTF1-204ENST00000452950 CUX2O14529 1486 aa10.27□□□□□ -0.77
CSTF1-204ENST00000452950 TMEM88BA6NKF7 163 aa10.26□□□□□ -0.77
CSTF1-204ENST00000452950 ATG7O95352 703 aa10.26□□□□□ -0.77
CSTF1-204ENST00000452950 HMGB1P09429 215 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms