RNA–Protein interactions for RNA: ENST00000451491.2

TSSC4-207, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TSSC4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-207ENST00000451491 SAFB2Q14151 953 aaKnown RBP eCLIP28.52■■■□□ 2.16
TSSC4-207ENST00000451491 EIF3AQ14152 1382 aaKnown RBP28.52■■■□□ 2.16
TSSC4-207ENST00000451491 DCCP43146 1447 aa28.5■■■□□ 2.15
TSSC4-207ENST00000451491 CENPJQ9HC77 1338 aaPredicted RBP28.5■■■□□ 2.15
TSSC4-207ENST00000451491 QRICH2Q9H0J4 1663 aa28.5■■■□□ 2.15
TSSC4-207ENST00000451491 ADGRB2O60241 1585 aa28.48■■■□□ 2.15
TSSC4-207ENST00000451491 CDC42BPGQ6DT37 1551 aa28.47■■■□□ 2.15
TSSC4-207ENST00000451491 USP47Q96K76 1375 aa28.46■■■□□ 2.15
TSSC4-207ENST00000451491 ZEB1P37275 1124 aaPredicted RBP28.45■■■□□ 2.15
TSSC4-207ENST00000451491 MINK1Q8N4C8 1332 aaPredicted RBP28.44■■■□□ 2.14
TSSC4-207ENST00000451491 CADPS2Q86UW7 1296 aa28.43■■■□□ 2.14
TSSC4-207ENST00000451491 ATF3P18847 181 aa28.43■■■□□ 2.14
TSSC4-207ENST00000451491 HIRIP3Q9BW71 556 aaPredicted RBP28.42■■■□□ 2.14
TSSC4-207ENST00000451491 ILDR1Q86SU0 546 aaPredicted RBP28.41■■■□□ 2.14
TSSC4-207ENST00000451491 SBNO2Q9Y2G9 1366 aa28.41■■■□□ 2.14
TSSC4-207ENST00000451491 ST20-MTHFSA0A0A6YYL1 179 aa28.4■■■□□ 2.14
TSSC4-207ENST00000451491 TOM1O60784 492 aa28.4■■■□□ 2.14
TSSC4-207ENST00000451491 FMN2Q9NZ56 1722 aa28.4■■■□□ 2.14
TSSC4-207ENST00000451491 UBAP1LF5GYI3 381 aa28.38■■■□□ 2.13
TSSC4-207ENST00000451491 MST1RQ04912 1400 aa28.37■■■□□ 2.13
TSSC4-207ENST00000451491 WASLO00401 505 aaPredicted RBP28.35■■■□□ 2.13
TSSC4-207ENST00000451491 EIF4G2P78344 907 aaKnown RBP eCLIP28.35■■■□□ 2.13
TSSC4-207ENST00000451491 SLAIN2Q9P270 581 aa28.35■■■□□ 2.13
TSSC4-207ENST00000451491 TULP4Q9NRJ4 1543 aa28.34■■■□□ 2.13
TSSC4-207ENST00000451491 TESK2Q96S53 571 aa28.34■■■□□ 2.13
TSSC4-207ENST00000451491 C1orf167Q5SNV9 1468 aa28.31■■■□□ 2.12
TSSC4-207ENST00000451491 HSPA5P11021 654 aaKnown RBP28.3■■■□□ 2.12
TSSC4-207ENST00000451491 CDK19Q9BWU1 502 aa28.3■■■□□ 2.12
TSSC4-207ENST00000451491 EVC2Q86UK5 1308 aa28.3■■■□□ 2.12
TSSC4-207ENST00000451491 USP32Q8NFA0 1604 aa28.3■■■□□ 2.12
TSSC4-207ENST00000451491 RGPD8O14715 1765 aaPredicted RBP28.3■■■□□ 2.12
TSSC4-207ENST00000451491 ANKARQ7Z5J8 1434 aa28.28■■■□□ 2.12
TSSC4-207ENST00000451491 NUTM2FA1L443 756 aa28.27■■■□□ 2.12
TSSC4-207ENST00000451491 SLC24A1O60721 1099 aa28.27■■■□□ 2.12
TSSC4-207ENST00000451491 ROBO1Q9Y6N7 1651 aa28.26■■■□□ 2.12
TSSC4-207ENST00000451491 PIP4K2BP78356 416 aa28.26■■■□□ 2.11
TSSC4-207ENST00000451491 ATP7BP35670 1465 aa28.25■■■□□ 2.11
TSSC4-207ENST00000451491 PRR36Q9H6K5 1346 aa28.25■■■□□ 2.11
TSSC4-207ENST00000451491 SRPK2P78362 688 aaKnown RBP28.24■■■□□ 2.11
TSSC4-207ENST00000451491 FBXO41Q8TF61 875 aa28.24■■■□□ 2.11
TSSC4-207ENST00000451491 BRINP3Q76B58 766 aa28.22■■■□□ 2.11
TSSC4-207ENST00000451491 CABP2Q9NPB3 220 aa28.22■■■□□ 2.11
TSSC4-207ENST00000451491 ITSN1Q15811 1721 aa28.22■■■□□ 2.11
TSSC4-207ENST00000451491 SCAF1Q9H7N4 1312 aaKnown RBP28.21■■■□□ 2.11
TSSC4-207ENST00000451491 NUDT16Q96DE0 195 aaKnown RBP28.21■■■□□ 2.11
TSSC4-207ENST00000451491 ORAI2Q96SN7 254 aa28.21■■■□□ 2.11
TSSC4-207ENST00000451491 TOPAZ1Q8N9V7 1692 aa28.21■■■□□ 2.11
TSSC4-207ENST00000451491 TMF1P82094 1093 aa28.2■■■□□ 2.11
TSSC4-207ENST00000451491 DISP3Q9P2K9 1392 aa28.2■■■□□ 2.1
TSSC4-207ENST00000451491 ESCO1Q5FWF5 840 aa28.19■■■□□ 2.1
TSSC4-207ENST00000451491 KIF1AQ12756 1690 aa28.18■■■□□ 2.1
TSSC4-207ENST00000451491 PUS7Q96PZ0 661 aaKnown RBP28.18■■■□□ 2.1
TSSC4-207ENST00000451491 CCDC61Q9Y6R9 512 aa28.17■■■□□ 2.1
TSSC4-207ENST00000451491 ATAD2Q6PL18 1390 aa28.16■■■□□ 2.1
TSSC4-207ENST00000451491 NHSL1Q5SYE7 1610 aa28.14■■■□□ 2.1
TSSC4-207ENST00000451491 PHF8Q9UPP1 1060 aa28.14■■■□□ 2.1
TSSC4-207ENST00000451491 AHDC1Q5TGY3 1603 aaPredicted RBP28.12■■■□□ 2.09
TSSC4-207ENST00000451491 CDCA8Q53HL2 280 aa28.12■■■□□ 2.09
TSSC4-207ENST00000451491 PPIP5K1Q6PFW1 1433 aa28.12■■■□□ 2.09
TSSC4-207ENST00000451491 PLEKHG3A1L390 1219 aa28.09■■■□□ 2.09
TSSC4-207ENST00000451491 PMFBP1Q8TBY8 1022 aa28.09■■■□□ 2.09
TSSC4-207ENST00000451491 FOXO3O43524 673 aa28.08■■■□□ 2.09
TSSC4-207ENST00000451491 CABP1Q9NZU7 370 aa28.08■■■□□ 2.09
TSSC4-207ENST00000451491 PHLPP1O60346 1717 aa28.07■■■□□ 2.08
TSSC4-207ENST00000451491 NPHP3Q7Z494 1330 aa28.07■■■□□ 2.08
TSSC4-207ENST00000451491 POLR3AO14802 1390 aaPredicted RBP28.06■■■□□ 2.08
TSSC4-207ENST00000451491 C11orf95C9JLR9 678 aaPredicted RBP28.06■■■□□ 2.08
TSSC4-207ENST00000451491 DDX17Q92841 729 aaKnown RBP28.06■■■□□ 2.08
TSSC4-207ENST00000451491 NINLQ9Y2I6 1382 aa28.03■■■□□ 2.08
TSSC4-207ENST00000451491 ACEP12821 1306 aa28.03■■■□□ 2.08
TSSC4-207ENST00000451491 NGDNQ8NEJ9 315 aaKnown RBP28.03■■■□□ 2.08
TSSC4-207ENST00000451491 COL16A1Q07092 1604 aaPredicted RBP28.03■■■□□ 2.08
TSSC4-207ENST00000451491 PXDNQ92626 1479 aa28.03■■■□□ 2.08
TSSC4-207ENST00000451491 MYOM1P52179 1685 aa28.02■■■□□ 2.08
TSSC4-207ENST00000451491 SOS2Q07890 1332 aaPredicted RBP28.02■■■□□ 2.08
TSSC4-207ENST00000451491 HSPA1LP34931 641 aa28.01■■■□□ 2.08
TSSC4-207ENST00000451491 AKAP12Q02952 1782 aa28.01■■■□□ 2.07
TSSC4-207ENST00000451491 TMC1Q8TDI8 760 aa28.01■■■□□ 2.07
TSSC4-207ENST00000451491 SLC12A5Q9H2X9 1139 aa28.01■■■□□ 2.07
TSSC4-207ENST00000451491 KIF7Q2M1P5 1343 aa27.99■■■□□ 2.07
TSSC4-207ENST00000451491 PSME1Q06323 249 aa27.99■■■□□ 2.07
TSSC4-207ENST00000451491 CD163L1Q9NR16 1453 aa27.98■■■□□ 2.07
TSSC4-207ENST00000451491 CPSF1Q10570 1443 aaKnown RBP27.98■■■□□ 2.07
TSSC4-207ENST00000451491 XPCQ01831 940 aaPredicted RBP27.98■■■□□ 2.07
TSSC4-207ENST00000451491 KRT28Q7Z3Y7 464 aa27.98■■■□□ 2.07
TSSC4-207ENST00000451491 TRPM3Q9HCF6 1732 aaPredicted RBP27.97■■■□□ 2.07
TSSC4-207ENST00000451491 POLR3GLQ9BT43 218 aa27.96■■■□□ 2.07
TSSC4-207ENST00000451491 MON2Q7Z3U7 1717 aa27.95■■■□□ 2.06
TSSC4-207ENST00000451491 ZNF692Q9BU19 519 aaPredicted RBP27.94■■■□□ 2.06
TSSC4-207ENST00000451491 USP6P35125 1406 aa27.94■■■□□ 2.06
TSSC4-207ENST00000451491 CCDC7Q96M83 1385 aa27.93■■■□□ 2.06
TSSC4-207ENST00000451491 WASHC2AQ641Q2 1341 aa27.93■■■□□ 2.06
TSSC4-207ENST00000451491 SBNO1A3KN83 1393 aa27.93■■■□□ 2.06
TSSC4-207ENST00000451491 LRRC59Q96AG4 307 aaKnown RBP27.92■■■□□ 2.06
TSSC4-207ENST00000451491 TERF2IPQ9NYB0 399 aa27.92■■■□□ 2.06
TSSC4-207ENST00000451491 A0A1W2PP64 1363 aa27.92■■■□□ 2.06
TSSC4-207ENST00000451491 ANKRD36BQ8N2N9 1353 aa27.91■■■□□ 2.06
TSSC4-207ENST00000451491 HDGFL2Q7Z4V5 671 aaPredicted RBP27.91■■■□□ 2.06
TSSC4-207ENST00000451491 BRD4O60885 1362 aaPredicted RBP27.9■■■□□ 2.06
TSSC4-207ENST00000451491 KTN1Q86UP2 1357 aaKnown RBP27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms