RNA–Protein interactions for RNA: ENST00000449833.6

SHANK2-211, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 8,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-211ENST00000449833 CCDC146Q8IYE0 955 aa13.9□□□□□ -0.18
SHANK2-211ENST00000449833 CCDC43Q96MW1 224 aaKnown RBP13.9□□□□□ -0.18
SHANK2-211ENST00000449833 CCDC112Q8NEF3 446 aa13.9□□□□□ -0.18
SHANK2-211ENST00000449833 NOL10Q9BSC4 688 aaKnown RBP13.9□□□□□ -0.19
SHANK2-211ENST00000449833 LRRCC1Q9C099 1032 aa13.9□□□□□ -0.19
SHANK2-211ENST00000449833 SMC3Q9UQE7 1217 aa13.9□□□□□ -0.19
SHANK2-211ENST00000449833 OFD1O75665 1012 aa13.89□□□□□ -0.19
SHANK2-211ENST00000449833 TRDNQ13061 729 aa13.89□□□□□ -0.19
SHANK2-211ENST00000449833 PDILTQ8N807 584 aa13.89□□□□□ -0.19
SHANK2-211ENST00000449833 RRP1P56182 461 aaKnown RBP13.89□□□□□ -0.19
SHANK2-211ENST00000449833 SAFBQ15424 915 aaKnown RBP eCLIP13.89□□□□□ -0.19
SHANK2-211ENST00000449833 ZBED9Q6R2W3 1325 aa13.89□□□□□ -0.19
SHANK2-211ENST00000449833 CGNQ9P2M7 1197 aaKnown RBP13.89□□□□□ -0.19
SHANK2-211ENST00000449833 TRIM34Q9BYJ4 488 aa13.89□□□□□ -0.19
SHANK2-211ENST00000449833 SEPT7Q16181 437 aaKnown RBP13.88□□□□□ -0.19
SHANK2-211ENST00000449833 NFKBIBQ15653 356 aa13.88□□□□□ -0.19
SHANK2-211ENST00000449833 ERICH2A1L162 156 aa13.87□□□□□ -0.19
SHANK2-211ENST00000449833 FBXW7Q969H0 707 aa13.87□□□□□ -0.19
SHANK2-211ENST00000449833 GBP3Q9H0R5 595 aa13.87□□□□□ -0.19
SHANK2-211ENST00000449833 SARNPP82979 210 aaKnown RBP13.87□□□□□ -0.19
SHANK2-211ENST00000449833 RB1CC1Q8TDY2 1594 aa13.87□□□□□ -0.19
SHANK2-211ENST00000449833 PPM1EQ8WY54 764 aa13.87□□□□□ -0.19
SHANK2-211ENST00000449833 INTS3Q68E01 1043 aaKnown RBP13.87□□□□□ -0.19
SHANK2-211ENST00000449833 CENPHQ9H3R5 247 aa13.87□□□□□ -0.19
SHANK2-211ENST00000449833 SUDS3Q9H7L9 328 aaPredicted RBP13.87□□□□□ -0.19
SHANK2-211ENST00000449833 ERICH4A6NGS2 130 aa13.87□□□□□ -0.19
SHANK2-211ENST00000449833 ZKSCAN2Q63HK3 967 aa13.87□□□□□ -0.19
SHANK2-211ENST00000449833 VPS37CA5D8V6 355 aaPredicted RBP13.87□□□□□ -0.19
SHANK2-211ENST00000449833 RBM10P98175 930 aaKnown RBP13.87□□□□□ -0.19
SHANK2-211ENST00000449833 MAP9Q49MG5 647 aa13.87□□□□□ -0.19
SHANK2-211ENST00000449833 ZFYVE27Q5T4F4 411 aa13.87□□□□□ -0.19
SHANK2-211ENST00000449833 E9PSI1 815 aa13.86□□□□□ -0.19
SHANK2-211ENST00000449833 RBM33Q96EV2 1170 aaKnown RBP13.86□□□□□ -0.19
SHANK2-211ENST00000449833 BRD2P25440 801 aaKnown RBP13.86□□□□□ -0.19
SHANK2-211ENST00000449833 MYBBP1AQ9BQG0 1328 aaKnown RBP13.86□□□□□ -0.19
SHANK2-211ENST00000449833 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.86□□□□□ -0.19
SHANK2-211ENST00000449833 FEZ1Q99689 392 aa13.86□□□□□ -0.19
SHANK2-211ENST00000449833 IVLP07476 585 aa13.86□□□□□ -0.19
SHANK2-211ENST00000449833 BCCIPQ9P287 314 aaKnown RBP eCLIP13.86□□□□□ -0.197e-6■■■■□ 19.3
SHANK2-211ENST00000449833 TRIM5Q9C035 493 aa13.85□□□□□ -0.19
SHANK2-211ENST00000449833 BRMS1Q9HCU9 246 aa13.85□□□□□ -0.19
SHANK2-211ENST00000449833 CTDP1Q9Y5B0 961 aaPredicted RBP13.85□□□□□ -0.19
SHANK2-211ENST00000449833 GOLGA6L9A6NEM1 432 aa13.85□□□□□ -0.19
SHANK2-211ENST00000449833 GTF2E1P29083 439 aaPredicted RBP13.85□□□□□ -0.19
SHANK2-211ENST00000449833 KIF3BO15066 747 aa13.85□□□□□ -0.19
SHANK2-211ENST00000449833 LUC7LQ9NQ29 371 aaKnown RBP13.85□□□□□ -0.19
SHANK2-211ENST00000449833 DDX19BQ9UMR2 479 aa13.85□□□□□ -0.19
SHANK2-211ENST00000449833 GTPBP4Q9BZE4 634 aaKnown RBP13.85□□□□□ -0.19
SHANK2-211ENST00000449833 BCL11BQ9C0K0 894 aaPredicted RBP13.84□□□□□ -0.19
SHANK2-211ENST00000449833 MPHOSPH10O00566 681 aaKnown RBP13.84□□□□□ -0.19
SHANK2-211ENST00000449833 NFXL1Q6ZNB6 911 aa13.84□□□□□ -0.19
SHANK2-211ENST00000449833 DYNC1I1O14576 645 aa13.84□□□□□ -0.19
SHANK2-211ENST00000449833 PSMD1Q99460 953 aa13.84□□□□□ -0.19
SHANK2-211ENST00000449833 SEPT11Q9NVA2 429 aaKnown RBP13.84□□□□□ -0.19
SHANK2-211ENST00000449833 MRVI1Q9Y6F6 885 aa13.83□□□□□ -0.19
SHANK2-211ENST00000449833 ESPNB1AK53 854 aa13.83□□□□□ -0.2
SHANK2-211ENST00000449833 TSPY26PQ9H489 355 aa13.83□□□□□ -0.2
SHANK2-211ENST00000449833 MAPK8IP2Q13387 824 aaPredicted RBP13.83□□□□□ -0.2
SHANK2-211ENST00000449833 PKD2Q13563 968 aa13.83□□□□□ -0.2
SHANK2-211ENST00000449833 DNAAF4Q8WXU2 420 aa13.83□□□□□ -0.2
SHANK2-211ENST00000449833 MNAT1P51948 309 aa13.83□□□□□ -0.2
SHANK2-211ENST00000449833 SKIDA1Q1XH10 827 aa13.83□□□□□ -0.2
SHANK2-211ENST00000449833 FILIP1LQ4L180 1135 aa13.83□□□□□ -0.2
SHANK2-211ENST00000449833 CCAR1Q8IX12 1150 aaKnown RBP13.83□□□□□ -0.2
SHANK2-211ENST00000449833 IPO4Q8TEX9 1081 aaKnown RBP13.83□□□□□ -0.2
SHANK2-211ENST00000449833 BAZ1BQ9UIG0 1483 aaKnown RBP13.83□□□□□ -0.2
SHANK2-211ENST00000449833 SMC2O95347 1197 aa13.82□□□□□ -0.2
SHANK2-211ENST00000449833 MIPOL1Q8TD10 442 aa13.82□□□□□ -0.2
SHANK2-211ENST00000449833 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.82□□□□□ -0.2
SHANK2-211ENST00000449833 NINLQ9Y2I6 1382 aa13.82□□□□□ -0.2
SHANK2-211ENST00000449833 CRBNQ96SW2 442 aa13.82□□□□□ -0.2
SHANK2-211ENST00000449833 AAMPQ13685 434 aa13.82□□□□□ -0.2
SHANK2-211ENST00000449833 SEPT14Q6ZU15 432 aa13.82□□□□□ -0.2
SHANK2-211ENST00000449833 KINO60870 393 aaKnown RBP13.82□□□□□ -0.2
SHANK2-211ENST00000449833 XBP1P17861 261 aa13.81□□□□□ -0.2
SHANK2-211ENST00000449833 SDF4Q9BRK5 362 aa13.81□□□□□ -0.2
SHANK2-211ENST00000449833 TCHPQ9BT92 498 aa13.81□□□□□ -0.2
SHANK2-211ENST00000449833 TICAM2Q86XR7 235 aa13.81□□□□□ -0.2
SHANK2-211ENST00000449833 MAGEC2Q9UBF1 373 aaPredicted RBP13.81□□□□□ -0.2
SHANK2-211ENST00000449833 IFIT2P09913 472 aaKnown RBP13.81□□□□□ -0.2
SHANK2-211ENST00000449833 RAB3GAP2Q9H2M9 1393 aa13.81□□□□□ -0.2
SHANK2-211ENST00000449833 AMPHP49418 695 aa13.81□□□□□ -0.2
SHANK2-211ENST00000449833 C9orf78Q9NZ63 289 aaPredicted RBP13.81□□□□□ -0.2
SHANK2-211ENST00000449833 TMCO3Q6UWJ1 677 aa13.8□□□□□ -0.2
SHANK2-211ENST00000449833 DAAM2Q86T65 1068 aa13.8□□□□□ -0.2
SHANK2-211ENST00000449833 C22orf23Q9BZE7 217 aa13.8□□□□□ -0.2
SHANK2-211ENST00000449833 NBPF1Q3BBV0 1214 aa13.8□□□□□ -0.2
SHANK2-211ENST00000449833 RNF168Q8IYW5 571 aaPredicted RBP13.8□□□□□ -0.2
SHANK2-211ENST00000449833 BRPF3Q9ULD4 1205 aa13.8□□□□□ -0.2
SHANK2-211ENST00000449833 CEP63Q96MT8 703 aa13.8□□□□□ -0.2
SHANK2-211ENST00000449833 CCDC175P0C221 793 aa13.79□□□□□ -0.2
SHANK2-211ENST00000449833 KIF3CO14782 793 aa13.79□□□□□ -0.2
SHANK2-211ENST00000449833 RAD21O60216 631 aa13.79□□□□□ -0.2
SHANK2-211ENST00000449833 IL27Q8NEV9 243 aa13.79□□□□□ -0.2
SHANK2-211ENST00000449833 ZNHIT6Q9NWK9 470 aaKnown RBP13.79□□□□□ -0.2
SHANK2-211ENST00000449833 DHX16O60231 1041 aaKnown RBP13.79□□□□□ -0.2
SHANK2-211ENST00000449833 TRAK2O60296 914 aa13.79□□□□□ -0.2
SHANK2-211ENST00000449833 PIP4K2AP48426 406 aaPredicted RBP13.79□□□□□ -0.2
SHANK2-211ENST00000449833 SYCP1Q15431 976 aa13.79□□□□□ -0.2
SHANK2-211ENST00000449833 FMN1Q68DA7 1419 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms