RNA–Protein interactions for RNA: ENST00000449307.3

AC006001.3-201, humanhuman

TSL 3 BASIC

Gene AC006001.3, Length 7,092 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.3-201ENST00000449307 BECN2A8MW95 431 aa15.51■□□□□ 0.07
AC006001.3-201ENST00000449307 ADAMTS2O95450 1211 aa15.51■□□□□ 0.07
AC006001.3-201ENST00000449307 PHLDB1Q86UU1 1377 aa15.5■□□□□ 0.07
AC006001.3-201ENST00000449307 TBC1D2BQ9UPU7 963 aa15.5■□□□□ 0.07
AC006001.3-201ENST00000449307 EPS15P42566 896 aa15.5■□□□□ 0.07
AC006001.3-201ENST00000449307 ZSCAN29Q8IWY8 852 aaPredicted RBP15.5■□□□□ 0.07
AC006001.3-201ENST00000449307 MYCNP04198 464 aaPredicted RBP15.5■□□□□ 0.07
AC006001.3-201ENST00000449307 GAPVD1Q14C86 1478 aa15.5■□□□□ 0.07
AC006001.3-201ENST00000449307 SAFBQ15424 915 aaKnown RBP eCLIP15.5■□□□□ 0.07
AC006001.3-201ENST00000449307 RRP12Q5JTH9 1297 aaKnown RBP15.5■□□□□ 0.07
AC006001.3-201ENST00000449307 RNF20Q5VTR2 975 aa15.5■□□□□ 0.07
AC006001.3-201ENST00000449307 MYBBP1AQ9BQG0 1328 aaKnown RBP15.5■□□□□ 0.07
AC006001.3-201ENST00000449307 ANKRD20A12PQ8NF67 263 aa15.49■□□□□ 0.07
AC006001.3-201ENST00000449307 PRDM11Q9NQV5 511 aa15.49■□□□□ 0.07
AC006001.3-201ENST00000449307 BRMS1Q9HCU9 246 aa15.49■□□□□ 0.07
AC006001.3-201ENST00000449307 TTLL12Q14166 644 aaPredicted RBP15.48■□□□□ 0.07
AC006001.3-201ENST00000449307 DNAJC2Q99543 621 aaKnown RBP15.48■□□□□ 0.07
AC006001.3-201ENST00000449307 APAF1O14727 1248 aa15.48■□□□□ 0.07
AC006001.3-201ENST00000449307 SLC3A2P08195 630 aaKnown RBP15.48■□□□□ 0.07
AC006001.3-201ENST00000449307 NAP1L1P55209 391 aaKnown RBP15.47■□□□□ 0.07
AC006001.3-201ENST00000449307 CHMP4BP1P59074 171 aa15.47■□□□□ 0.07
AC006001.3-201ENST00000449307 MPHOSPH10O00566 681 aaKnown RBP15.47■□□□□ 0.07
AC006001.3-201ENST00000449307 TOP2AP11388 1531 aaKnown RBP15.47■□□□□ 0.07
AC006001.3-201ENST00000449307 HOOK1Q9UJC3 728 aaKnown RBP15.47■□□□□ 0.07
AC006001.3-201ENST00000449307 E9PSI1 815 aa15.47■□□□□ 0.07
AC006001.3-201ENST00000449307 TTC39AQ5SRH9 613 aa15.47■□□□□ 0.07
AC006001.3-201ENST00000449307 GNL3LQ9NVN8 582 aaKnown RBP15.47■□□□□ 0.07
AC006001.3-201ENST00000449307 COG6Q9Y2V7 657 aa15.46■□□□□ 0.07
AC006001.3-201ENST00000449307 AQRO60306 1485 aaKnown RBP eCLIP15.46■□□□□ 0.07
AC006001.3-201ENST00000449307 ROCK1Q13464 1354 aa15.46■□□□□ 0.07
AC006001.3-201ENST00000449307 ERC2O15083 957 aa15.46■□□□□ 0.07
AC006001.3-201ENST00000449307 UBTFL1P0CB47 393 aaPredicted RBP15.46■□□□□ 0.07
AC006001.3-201ENST00000449307 PATL2C9JE40 543 aaKnown RBP15.46■□□□□ 0.06
AC006001.3-201ENST00000449307 API5Q9BZZ5 524 aaKnown RBP15.46■□□□□ 0.06
AC006001.3-201ENST00000449307 IPO7O95373 1038 aaKnown RBP15.45■□□□□ 0.06
AC006001.3-201ENST00000449307 MYL6BP14649 208 aa15.45■□□□□ 0.06
AC006001.3-201ENST00000449307 SLC26A8Q96RN1 970 aa15.45■□□□□ 0.06
AC006001.3-201ENST00000449307 AFAP1Q8N556 730 aa15.44■□□□□ 0.06
AC006001.3-201ENST00000449307 ATP6V1DQ9Y5K8 247 aa15.44■□□□□ 0.06
AC006001.3-201ENST00000449307 HSP90AB4PQ58FF6 505 aa15.44■□□□□ 0.06
AC006001.3-201ENST00000449307 CCDC70Q6NSX1 233 aa15.44■□□□□ 0.06
AC006001.3-201ENST00000449307 ZNF219Q9P2Y4 722 aaPredicted RBP15.44■□□□□ 0.06
AC006001.3-201ENST00000449307 SPG7Q9UQ90 795 aa15.44■□□□□ 0.06
AC006001.3-201ENST00000449307 BICD2Q8TD16 824 aa15.43■□□□□ 0.06
AC006001.3-201ENST00000449307 XBP1P17861 261 aa15.43■□□□□ 0.06
AC006001.3-201ENST00000449307 RAD54L2Q9Y4B4 1467 aa15.43■□□□□ 0.06
AC006001.3-201ENST00000449307 GNAI1P63096 354 aa15.43■□□□□ 0.06
AC006001.3-201ENST00000449307 FAM161AQ3B820 660 aa15.43■□□□□ 0.06
AC006001.3-201ENST00000449307 PRAM1Q96QH2 718 aa15.43■□□□□ 0.06
AC006001.3-201ENST00000449307 CDK5RAP3Q96JB5 506 aa15.42■□□□□ 0.06
AC006001.3-201ENST00000449307 WDHD1O75717 1129 aaPredicted RBP15.42■□□□□ 0.06
AC006001.3-201ENST00000449307 POGZQ7Z3K3 1410 aa15.42■□□□□ 0.06
AC006001.3-201ENST00000449307 SPDYE4A6NLX3 237 aa15.42■□□□□ 0.06
AC006001.3-201ENST00000449307 NGLY1Q96IV0 654 aa15.42■□□□□ 0.06
AC006001.3-201ENST00000449307 SART3Q15020 963 aaKnown RBP15.42■□□□□ 0.06
AC006001.3-201ENST00000449307 MPHOSPH8Q99549 860 aa15.42■□□□□ 0.06
AC006001.3-201ENST00000449307 PPM1FP49593 454 aaPredicted RBP15.41■□□□□ 0.06
AC006001.3-201ENST00000449307 USP47Q96K76 1375 aa15.41■□□□□ 0.06
AC006001.3-201ENST00000449307 VPS37CA5D8V6 355 aaPredicted RBP15.41■□□□□ 0.06
AC006001.3-201ENST00000449307 GRM1Q13255 1194 aa15.41■□□□□ 0.06
AC006001.3-201ENST00000449307 MTHFSP49914 203 aa15.41■□□□□ 0.06
AC006001.3-201ENST00000449307 ATAD2BQ9ULI0 1458 aa15.4■□□□□ 0.06
AC006001.3-201ENST00000449307 ZC3H6P61129 1189 aaKnown RBP15.4■□□□□ 0.06
AC006001.3-201ENST00000449307 HSP90AB2PQ58FF8 381 aa15.4■□□□□ 0.06
AC006001.3-201ENST00000449307 FSD1Q9BTV5 496 aa15.4■□□□□ 0.06
AC006001.3-201ENST00000449307 KRT18P05783 430 aaKnown RBP15.4■□□□□ 0.06
AC006001.3-201ENST00000449307 GAS2L2Q8NHY3 880 aa15.4■□□□□ 0.06
AC006001.3-201ENST00000449307 CCDC30Q5VVM6 783 aa15.4■□□□□ 0.06
AC006001.3-201ENST00000449307 RUNDC1Q96C34 613 aa15.4■□□□□ 0.06
AC006001.3-201ENST00000449307 DDX19BQ9UMR2 479 aa15.4■□□□□ 0.06
AC006001.3-201ENST00000449307 ZNF644Q9H582 1327 aaPredicted RBP15.4■□□□□ 0.06
AC006001.3-201ENST00000449307 GOLGA6L3A6NEY3 463 aa15.4■□□□□ 0.06
AC006001.3-201ENST00000449307 REC8O95072 547 aa15.39■□□□□ 0.05
AC006001.3-201ENST00000449307 ATP2B1P20020 1258 aa15.39■□□□□ 0.05
AC006001.3-201ENST00000449307 CCDC158Q5M9N0 1113 aa15.39■□□□□ 0.05
AC006001.3-201ENST00000449307 VSIG10Q8N0Z9 540 aa15.39■□□□□ 0.05
AC006001.3-201ENST00000449307 SPINK5Q9NQ38 1064 aaPredicted RBP15.39■□□□□ 0.05
AC006001.3-201ENST00000449307 ZPR1O75312 459 aa15.38■□□□□ 0.05
AC006001.3-201ENST00000449307 DZIP1LQ8IYY4 767 aaKnown RBP15.38■□□□□ 0.05
AC006001.3-201ENST00000449307 MATR3P43243 847 aaKnown RBP eCLIP15.38■□□□□ 0.05
AC006001.3-201ENST00000449307 OFD1O75665 1012 aa15.37■□□□□ 0.05
AC006001.3-201ENST00000449307 RAPGEF3O95398 923 aa15.36■□□□□ 0.05
AC006001.3-201ENST00000449307 TMOD2Q9NZR1 351 aa15.36■□□□□ 0.05
AC006001.3-201ENST00000449307 CRBNQ96SW2 442 aa15.36■□□□□ 0.05
AC006001.3-201ENST00000449307 SIL1Q9H173 461 aa15.36■□□□□ 0.05
AC006001.3-201ENST00000449307 PRG4Q92954 1404 aaPredicted RBP15.36■□□□□ 0.05
AC006001.3-201ENST00000449307 ZNF530Q6P9A1 599 aaPredicted RBP15.36■□□□□ 0.05
AC006001.3-201ENST00000449307 TMEM87AQ8NBN3 555 aa15.36■□□□□ 0.05
AC006001.3-201ENST00000449307 FGD5Q6ZNL6 1462 aa15.36■□□□□ 0.05
AC006001.3-201ENST00000449307 WDR78Q5VTH9 848 aa15.36■□□□□ 0.05
AC006001.3-201ENST00000449307 SMC3Q9UQE7 1217 aa15.36■□□□□ 0.05
AC006001.3-201ENST00000449307 ZNF592Q92610 1267 aa15.36■□□□□ 0.05
AC006001.3-201ENST00000449307 CDK19Q9BWU1 502 aa15.36■□□□□ 0.05
AC006001.3-201ENST00000449307 NINLQ9Y2I6 1382 aa15.35■□□□□ 0.05
AC006001.3-201ENST00000449307 ZHX3Q9H4I2 956 aa15.35■□□□□ 0.05
AC006001.3-201ENST00000449307 CNTROBQ8N137 903 aa15.34■□□□□ 0.05
AC006001.3-201ENST00000449307 CCDC85AQ96PX6 553 aaPredicted RBP15.34■□□□□ 0.05
AC006001.3-201ENST00000449307 SURF6O75683 361 aaKnown RBP15.33■□□□□ 0.05
AC006001.3-201ENST00000449307 DDX49Q9Y6V7 483 aaKnown RBP15.33■□□□□ 0.05
AC006001.3-201ENST00000449307 CCDC57Q2TAC2 916 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms