RNA–Protein interactions for RNA: ENST00000448325.1

RAB28P3-201, Transcript of RAB28, member RAS oncogene family pseudogene 3, humanhuman

BASIC

Gene RAB28P3, Length 597 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P3-201ENST00000448325 WASHC4Q2M389 1173 aa9.15□□□□□ -0.94
RAB28P3-201ENST00000448325 CDCA8Q53HL2 280 aa9.15□□□□□ -0.94
RAB28P3-201ENST00000448325 SULF1Q8IWU6 871 aa9.15□□□□□ -0.94
RAB28P3-201ENST00000448325 PALM3A6NDB9 673 aaPredicted RBP9.14□□□□□ -0.95
RAB28P3-201ENST00000448325 RIMBP2O15034 1052 aa9.14□□□□□ -0.95
RAB28P3-201ENST00000448325 LMOD1P29536 600 aaPredicted RBP9.14□□□□□ -0.95
RAB28P3-201ENST00000448325 CTDSPL2Q05D32 466 aa9.14□□□□□ -0.95
RAB28P3-201ENST00000448325 TRIM34Q9BYJ4 488 aa9.14□□□□□ -0.95
RAB28P3-201ENST00000448325 CCDC27Q2M243 656 aa9.13□□□□□ -0.95
RAB28P3-201ENST00000448325 PRPF38BQ5VTL8 546 aaKnown RBP9.13□□□□□ -0.95
RAB28P3-201ENST00000448325 NUDT18Q6ZVK8 323 aa9.12□□□□□ -0.95
RAB28P3-201ENST00000448325 ALG2Q9H553 416 aa9.12□□□□□ -0.95
RAB28P3-201ENST00000448325 VRTNQ9H8Y1 702 aa9.12□□□□□ -0.95
RAB28P3-201ENST00000448325 TFIP11Q9UBB9 837 aaKnown RBP9.12□□□□□ -0.95
RAB28P3-201ENST00000448325 COL9A1P20849 921 aa9.11□□□□□ -0.95
RAB28P3-201ENST00000448325 SND1Q7KZF4 910 aaKnown RBP eCLIP9.11□□□□□ -0.95
RAB28P3-201ENST00000448325 ZBTB3Q9H5J0 574 aa9.11□□□□□ -0.95
RAB28P3-201ENST00000448325 KDM4AO75164 1064 aa9.1□□□□□ -0.95
RAB28P3-201ENST00000448325 DNAJB2P25686 324 aa9.1□□□□□ -0.95
RAB28P3-201ENST00000448325 RDH13Q8NBN7 331 aa9.1□□□□□ -0.95
RAB28P3-201ENST00000448325 KHSRPQ92945 711 aaKnown RBP eCLIP9.1□□□□□ -0.95
RAB28P3-201ENST00000448325 UCN2Q96RP3 112 aa9.1□□□□□ -0.95
RAB28P3-201ENST00000448325 IRX2Q9BZI1 471 aaPredicted RBP9.1□□□□□ -0.95
RAB28P3-201ENST00000448325 HCSTQ9UBK5 93 aa9.1□□□□□ -0.95
RAB28P3-201ENST00000448325 TSKSQ9UJT2 592 aa9.1□□□□□ -0.95
RAB28P3-201ENST00000448325 TMEM88BA6NKF7 163 aa9.09□□□□□ -0.95
RAB28P3-201ENST00000448325 LRRN4Q8WUT4 740 aa9.09□□□□□ -0.95
RAB28P3-201ENST00000448325 PCDHGC3Q9UN70 934 aa9.09□□□□□ -0.95
RAB28P3-201ENST00000448325 NUDT7P0C024 238 aa9.08□□□□□ -0.96
RAB28P3-201ENST00000448325 FDX1P10109 184 aa9.08□□□□□ -0.96
RAB28P3-201ENST00000448325 GUCA2AQ02747 115 aa9.08□□□□□ -0.96
RAB28P3-201ENST00000448325 PRR7Q8TB68 274 aa9.08□□□□□ -0.96
RAB28P3-201ENST00000448325 EPS8L1Q8TE68 723 aa9.08□□□□□ -0.96
RAB28P3-201ENST00000448325 TMEM134Q9H6X4 195 aa9.08□□□□□ -0.96
RAB28P3-201ENST00000448325 SHROOM4Q9ULL8 1493 aa9.08□□□□□ -0.96
RAB28P3-201ENST00000448325 HLA-CQ95604 372 aa9.07□□□□□ -0.96
RAB28P3-201ENST00000448325 PNMA3Q9UL41 463 aa9.07□□□□□ -0.96
RAB28P3-201ENST00000448325 AMOTL2Q9Y2J4 779 aa9.07□□□□□ -0.96
RAB28P3-201ENST00000448325 HOXA2O43364 376 aa9.06□□□□□ -0.96
RAB28P3-201ENST00000448325 ATG7O95352 703 aa9.06□□□□□ -0.96
RAB28P3-201ENST00000448325 TSC1Q92574 1164 aa9.06□□□□□ -0.96
RAB28P3-201ENST00000448325 TATDN2Q93075 761 aa9.05□□□□□ -0.96
RAB28P3-201ENST00000448325 ARSIQ5FYB1 569 aa9.04□□□□□ -0.96
RAB28P3-201ENST00000448325 MAFBQ9Y5Q3 323 aaPredicted RBP9.04□□□□□ -0.96
RAB28P3-201ENST00000448325 NBPF26B4DH59 902 aa9.03□□□□□ -0.96
RAB28P3-201ENST00000448325 SMAPO00193 183 aa9.03□□□□□ -0.96
RAB28P3-201ENST00000448325 GCGRP47871 477 aa9.03□□□□□ -0.96
RAB28P3-201ENST00000448325 USP46P62068 366 aa9.03□□□□□ -0.96
RAB28P3-201ENST00000448325 TBC1D9Q6ZT07 1266 aa9.03□□□□□ -0.96
RAB28P3-201ENST00000448325 UNCXA6NJT0 531 aa9.02□□□□□ -0.97
RAB28P3-201ENST00000448325 CFAP99D6REC4 459 aa9.02□□□□□ -0.97
RAB28P3-201ENST00000448325 HELBQ8NG08 1087 aaPredicted RBP9.02□□□□□ -0.97
RAB28P3-201ENST00000448325 SEMA3FQ13275 785 aa9.01□□□□□ -0.97
RAB28P3-201ENST00000448325 MTMR2Q13614 643 aa9.01□□□□□ -0.97
RAB28P3-201ENST00000448325 GNEQ9Y223 722 aaKnown RBP9□□□□□ -0.97
RAB28P3-201ENST00000448325 TRIM6-TRIM34B2RNG4 842 aa8.99□□□□□ -0.97
RAB28P3-201ENST00000448325 SOX11P35716 441 aa8.99□□□□□ -0.97
RAB28P3-201ENST00000448325 SLC10A3P09131 477 aa8.98□□□□□ -0.97
RAB28P3-201ENST00000448325 LSM11P83369 360 aaKnown RBP eCLIP8.98□□□□□ -0.97
RAB28P3-201ENST00000448325 NR6A1Q15406 480 aa8.98□□□□□ -0.97
RAB28P3-201ENST00000448325 PACS2Q86VP3 889 aa8.98□□□□□ -0.97
RAB28P3-201ENST00000448325 PPP1R3GB7ZBB8 358 aa8.97□□□□□ -0.97
RAB28P3-201ENST00000448325 ATP9BO43861 1147 aa8.97□□□□□ -0.97
RAB28P3-201ENST00000448325 RGS20O76081 388 aa8.97□□□□□ -0.97
RAB28P3-201ENST00000448325 BCL2L12Q9HB09 334 aa8.97□□□□□ -0.97
RAB28P3-201ENST00000448325 ZSWIM6Q9HCJ5 1215 aa8.97□□□□□ -0.97
RAB28P3-201ENST00000448325 LHX6Q9UPM6 363 aa8.97□□□□□ -0.97
RAB28P3-201ENST00000448325 C6orf229H3BNL8 230 aa8.96□□□□□ -0.98
RAB28P3-201ENST00000448325 KANK4Q5T7N3 995 aaPredicted RBP8.96□□□□□ -0.98
RAB28P3-201ENST00000448325 PTPREP23469 700 aa8.95□□□□□ -0.98
RAB28P3-201ENST00000448325 PROX2Q3B8N5 592 aa8.95□□□□□ -0.98
RAB28P3-201ENST00000448325 PPP4R3BQ5MIZ7 849 aa8.95□□□□□ -0.98
RAB28P3-201ENST00000448325 RSPH4AQ5TD94 716 aa8.95□□□□□ -0.98
RAB28P3-201ENST00000448325 TMEM164Q5U3C3 297 aa8.95□□□□□ -0.98
RAB28P3-201ENST00000448325 SLF2Q8IX21 1173 aa8.95□□□□□ -0.98
RAB28P3-201ENST00000448325 STK32AQ8WU08 396 aa8.95□□□□□ -0.98
RAB28P3-201ENST00000448325 SYMPKQ92797 1274 aaKnown RBP8.95□□□□□ -0.98
RAB28P3-201ENST00000448325 USP35Q9P2H5 1018 aa8.95□□□□□ -0.98
RAB28P3-201ENST00000448325 ZMIZ1Q9ULJ6 1067 aa8.95□□□□□ -0.98
RAB28P3-201ENST00000448325 PHLDB3Q6NSJ2 640 aa8.94□□□□□ -0.98
RAB28P3-201ENST00000448325 GPR153Q6NV75 609 aa8.94□□□□□ -0.98
RAB28P3-201ENST00000448325 PIK3CDO00329 1044 aa8.93□□□□□ -0.98
RAB28P3-201ENST00000448325 PER1O15534 1290 aaPredicted RBP8.93□□□□□ -0.98
RAB28P3-201ENST00000448325 B4GALNT3Q6L9W6 998 aa8.93□□□□□ -0.98
RAB28P3-201ENST00000448325 TXNDC2Q86VQ3 553 aa8.93□□□□□ -0.98
RAB28P3-201ENST00000448325 RBM47A0AV96 593 aaKnown RBP8.92□□□□□ -0.98
RAB28P3-201ENST00000448325 EIF4G2P78344 907 aaKnown RBP eCLIP8.92□□□□□ -0.98
RAB28P3-201ENST00000448325 SWT1Q5T5J6 900 aaKnown RBP8.92□□□□□ -0.98
RAB28P3-201ENST00000448325 CCER1Q8TC90 406 aaPredicted RBP8.92□□□□□ -0.98
RAB28P3-201ENST00000448325 ELOAQ14241 798 aaKnown RBP8.91□□□□□ -0.98
RAB28P3-201ENST00000448325 FUT2Q10981 343 aa8.9□□□□□ -0.98
RAB28P3-201ENST00000448325 PNMA1Q8ND90 353 aa8.9□□□□□ -0.98
RAB28P3-201ENST00000448325 NOVA2Q9UNW9 492 aaKnown RBP8.9□□□□□ -0.98
RAB28P3-201ENST00000448325 IGSF5Q9NSI5 407 aa8.89□□□□□ -0.99
RAB28P3-201ENST00000448325 KIAA1468Q9P260 1216 aa8.89□□□□□ -0.99
RAB28P3-201ENST00000448325 SLAIN2Q9P270 581 aa8.89□□□□□ -0.99
RAB28P3-201ENST00000448325 NR1H3Q13133 447 aa8.88□□□□□ -0.99
RAB28P3-201ENST00000448325 DNAJC14Q6Y2X3 702 aaPredicted RBP8.88□□□□□ -0.99
RAB28P3-201ENST00000448325 KIAA1522Q9P206 1035 aaPredicted RBP8.88□□□□□ -0.99
RAB28P3-201ENST00000448325 USP17L3A6NCW0 530 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms