RNA–Protein interactions for RNA: ENST00000448190.6

SNHG4-201, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-201ENST00000448190 FAM135BQ49AJ0 1406 aa19.09■□□□□ 0.65
SNHG4-201ENST00000448190 BRINP3Q76B58 766 aa19.09■□□□□ 0.65
SNHG4-201ENST00000448190 DDX17Q92841 729 aaKnown RBP19.09■□□□□ 0.65
SNHG4-201ENST00000448190 CLSPNQ9HAW4 1339 aa19.07■□□□□ 0.64
SNHG4-201ENST00000448190 ESCO1Q5FWF5 840 aa19.07■□□□□ 0.64
SNHG4-201ENST00000448190 ROCK2O75116 1388 aaKnown RBP19.06■□□□□ 0.64
SNHG4-201ENST00000448190 MST1RQ04912 1400 aa19.06■□□□□ 0.64
SNHG4-201ENST00000448190 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.05■□□□□ 0.64
SNHG4-201ENST00000448190 CARD11Q9BXL7 1154 aa19.04■□□□□ 0.64
SNHG4-201ENST00000448190 DCCP43146 1447 aa19.03■□□□□ 0.64
SNHG4-201ENST00000448190 C1orf167Q5SNV9 1468 aa19.03■□□□□ 0.64
SNHG4-201ENST00000448190 LAMC1P11047 1609 aa19.02■□□□□ 0.64
SNHG4-201ENST00000448190 WASLO00401 505 aaPredicted RBP19.01■□□□□ 0.63
SNHG4-201ENST00000448190 CDK19Q9BWU1 502 aa19■□□□□ 0.63
SNHG4-201ENST00000448190 TIMELESSQ9UNS1 1208 aa19■□□□□ 0.63
SNHG4-201ENST00000448190 DLC1Q96QB1 1528 aa19■□□□□ 0.63
SNHG4-201ENST00000448190 CENPJQ9HC77 1338 aaPredicted RBP19■□□□□ 0.63
SNHG4-201ENST00000448190 FOXO3O43524 673 aa18.99■□□□□ 0.63
SNHG4-201ENST00000448190 XPCQ01831 940 aaPredicted RBP18.99■□□□□ 0.63
SNHG4-201ENST00000448190 NALCNQ8IZF0 1738 aa18.98■□□□□ 0.63
SNHG4-201ENST00000448190 PMFBP1Q8TBY8 1022 aa18.98■□□□□ 0.63
SNHG4-201ENST00000448190 ROBO1Q9Y6N7 1651 aa18.96■□□□□ 0.63
SNHG4-201ENST00000448190 PHF8Q9UPP1 1060 aa18.96■□□□□ 0.63
SNHG4-201ENST00000448190 NUDT16Q96DE0 195 aaKnown RBP18.95■□□□□ 0.62
SNHG4-201ENST00000448190 CABP2Q9NPB3 220 aa18.95■□□□□ 0.62
SNHG4-201ENST00000448190 PRR36Q9H6K5 1346 aa18.95■□□□□ 0.62
SNHG4-201ENST00000448190 SRPK2P78362 688 aaKnown RBP18.94■□□□□ 0.62
SNHG4-201ENST00000448190 KNDC1Q76NI1 1749 aa18.94■□□□□ 0.62
SNHG4-201ENST00000448190 GPRASP1Q5JY77 1395 aa18.93■□□□□ 0.62
SNHG4-201ENST00000448190 KIAA1210Q9ULL0 1709 aa18.91■□□□□ 0.62
SNHG4-201ENST00000448190 KRT28Q7Z3Y7 464 aa18.91■□□□□ 0.62
SNHG4-201ENST00000448190 LRRC59Q96AG4 307 aaKnown RBP18.91■□□□□ 0.62
SNHG4-201ENST00000448190 CDC42BPGQ6DT37 1551 aa18.9■□□□□ 0.62
SNHG4-201ENST00000448190 TRPM1Q7Z4N2 1603 aa18.9■□□□□ 0.62
SNHG4-201ENST00000448190 ST20-MTHFSA0A0A6YYL1 179 aa18.9■□□□□ 0.62
SNHG4-201ENST00000448190 PSME1Q06323 249 aa18.9■□□□□ 0.62
SNHG4-201ENST00000448190 RALGAPBQ86X10 1494 aa18.9■□□□□ 0.62
SNHG4-201ENST00000448190 NUTM2BA6NNL0 878 aaPredicted RBP18.89■□□□□ 0.61
SNHG4-201ENST00000448190 NUTM2EB1AL46 878 aaPredicted RBP18.89■□□□□ 0.61
SNHG4-201ENST00000448190 PLEKHG5O94827 1062 aa18.89■□□□□ 0.61
SNHG4-201ENST00000448190 NUTM2AQ8IVF1 878 aaPredicted RBP18.89■□□□□ 0.61
SNHG4-201ENST00000448190 NGDNQ8NEJ9 315 aaKnown RBP18.89■□□□□ 0.61
SNHG4-201ENST00000448190 NPHP3Q7Z494 1330 aa18.89■□□□□ 0.61
SNHG4-201ENST00000448190 SOS2Q07890 1332 aaPredicted RBP18.88■□□□□ 0.61
SNHG4-201ENST00000448190 EIF3AQ14152 1382 aaKnown RBP18.87■□□□□ 0.61
SNHG4-201ENST00000448190 EVC2Q86UK5 1308 aa18.87■□□□□ 0.61
SNHG4-201ENST00000448190 JCADQ9P266 1359 aa18.86■□□□□ 0.61
SNHG4-201ENST00000448190 LMOD2Q6P5Q4 547 aa18.86■□□□□ 0.61
SNHG4-201ENST00000448190 CCDC61Q9Y6R9 512 aa18.86■□□□□ 0.61
SNHG4-201ENST00000448190 CABP1Q9NZU7 370 aa18.85■□□□□ 0.61
SNHG4-201ENST00000448190 ARHGEF28Q8N1W1 1705 aaKnown RBP18.84■□□□□ 0.61
SNHG4-201ENST00000448190 ANKARQ7Z5J8 1434 aa18.83■□□□□ 0.61
SNHG4-201ENST00000448190 PHLPP1O60346 1717 aa18.83■□□□□ 0.6
SNHG4-201ENST00000448190 DISP3Q9P2K9 1392 aa18.82■□□□□ 0.6
SNHG4-201ENST00000448190 AHDC1Q5TGY3 1603 aaPredicted RBP18.82■□□□□ 0.6
SNHG4-201ENST00000448190 ACEP12821 1306 aa18.82■□□□□ 0.6
SNHG4-201ENST00000448190 PAK3O75914 559 aaPredicted RBP18.82■□□□□ 0.6
SNHG4-201ENST00000448190 TESK2Q96S53 571 aa18.82■□□□□ 0.6
SNHG4-201ENST00000448190 FMN2Q9NZ56 1722 aa18.81■□□□□ 0.6
SNHG4-201ENST00000448190 PLEKHG3A1L390 1219 aa18.81■□□□□ 0.6
SNHG4-201ENST00000448190 USP47Q96K76 1375 aa18.81■□□□□ 0.6
SNHG4-201ENST00000448190 TULP4Q9NRJ4 1543 aa18.8■□□□□ 0.6
SNHG4-201ENST00000448190 ADGRB2O60241 1585 aa18.8■□□□□ 0.6
SNHG4-201ENST00000448190 COL16A1Q07092 1604 aaPredicted RBP18.79■□□□□ 0.6
SNHG4-201ENST00000448190 ADAMTS2O95450 1211 aa18.79■□□□□ 0.6
SNHG4-201ENST00000448190 MEX3CQ5U5Q3 659 aaKnown RBP18.79■□□□□ 0.6
SNHG4-201ENST00000448190 PNPLA6Q8IY17 1366 aa18.79■□□□□ 0.6
SNHG4-201ENST00000448190 SPATA31A3Q5VYP0 1347 aa18.78■□□□□ 0.6
SNHG4-201ENST00000448190 TMC1Q8TDI8 760 aa18.78■□□□□ 0.6
SNHG4-201ENST00000448190 CABLES1Q8TDN4 633 aa18.78■□□□□ 0.6
SNHG4-201ENST00000448190 PHF23Q9BUL5 403 aaPredicted RBP18.78■□□□□ 0.6
SNHG4-201ENST00000448190 ATP7BP35670 1465 aa18.77■□□□□ 0.6
SNHG4-201ENST00000448190 PXDNQ92626 1479 aa18.77■□□□□ 0.6
SNHG4-201ENST00000448190 SPATA31A6Q5VVP1 1343 aa18.77■□□□□ 0.6
SNHG4-201ENST00000448190 USP32Q8NFA0 1604 aa18.77■□□□□ 0.6
SNHG4-201ENST00000448190 PPIP5K1Q6PFW1 1433 aa18.76■□□□□ 0.59
SNHG4-201ENST00000448190 HSPA5P11021 654 aaKnown RBP18.76■□□□□ 0.59
SNHG4-201ENST00000448190 NUTM2GQ5VZR2 741 aa18.76■□□□□ 0.59
SNHG4-201ENST00000448190 SLC12A5Q9H2X9 1139 aa18.75■□□□□ 0.59
SNHG4-201ENST00000448190 EIF4G2P78344 907 aaKnown RBP eCLIP18.74■□□□□ 0.59
SNHG4-201ENST00000448190 NHSL1Q5SYE7 1610 aa18.74■□□□□ 0.59
SNHG4-201ENST00000448190 QRICH2Q9H0J4 1663 aa18.73■□□□□ 0.59
SNHG4-201ENST00000448190 TMF1P82094 1093 aa18.73■□□□□ 0.59
SNHG4-201ENST00000448190 RGS17Q9UGC6 210 aaPredicted RBP18.73■□□□□ 0.59
SNHG4-201ENST00000448190 SBNO2Q9Y2G9 1366 aa18.72■□□□□ 0.59
SNHG4-201ENST00000448190 HAP1P54257 671 aaPredicted RBP18.72■□□□□ 0.59
SNHG4-201ENST00000448190 C8orf37Q96NL8 207 aa18.72■□□□□ 0.59
SNHG4-201ENST00000448190 POLR3GLQ9BT43 218 aa18.72■□□□□ 0.59
SNHG4-201ENST00000448190 RGPD8O14715 1765 aaPredicted RBP18.72■□□□□ 0.59
SNHG4-201ENST00000448190 SBNO1A3KN83 1393 aa18.71■□□□□ 0.59
SNHG4-201ENST00000448190 LRP6O75581 1613 aa18.71■□□□□ 0.58
SNHG4-201ENST00000448190 POLR3AO14802 1390 aaPredicted RBP18.7■□□□□ 0.58
SNHG4-201ENST00000448190 MED1Q15648 1581 aaPredicted RBP18.7■□□□□ 0.58
SNHG4-201ENST00000448190 NGLY1Q96IV0 654 aa18.7■□□□□ 0.58
SNHG4-201ENST00000448190 ATAD2Q6PL18 1390 aa18.69■□□□□ 0.58
SNHG4-201ENST00000448190 TNS3Q68CZ2 1445 aa18.69■□□□□ 0.58
SNHG4-201ENST00000448190 SLC24A1O60721 1099 aa18.69■□□□□ 0.58
SNHG4-201ENST00000448190 ABTB2Q8N961 1025 aa18.69■□□□□ 0.58
SNHG4-201ENST00000448190 ZNF692Q9BU19 519 aaPredicted RBP18.68■□□□□ 0.58
SNHG4-201ENST00000448190 ILDR2Q71H61 639 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms