RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 DIP2AQ14689 1571 aa10.72□□□□□ -0.69
AC004540.1-206ENST00000448056 LRPPRCP42704 1394 aaKnown RBP10.71□□□□□ -0.69
AC004540.1-206ENST00000448056 SIRT1Q96EB6 747 aa10.71□□□□□ -0.69
AC004540.1-206ENST00000448056 ABCC11Q96J66 1382 aa10.71□□□□□ -0.69
AC004540.1-206ENST00000448056 CARD11Q9BXL7 1154 aa10.71□□□□□ -0.69
AC004540.1-206ENST00000448056 YTHDC2Q9H6S0 1430 aaKnown RBP10.7□□□□□ -0.7
AC004540.1-206ENST00000448056 TRAK1Q9UPV9 953 aa10.7□□□□□ -0.7
AC004540.1-206ENST00000448056 ADGRB1O14514 1584 aa10.69□□□□□ -0.7
AC004540.1-206ENST00000448056 GPRASP1Q5JY77 1395 aa10.69□□□□□ -0.7
AC004540.1-206ENST00000448056 PROSER2Q86WR7 435 aaPredicted RBP10.69□□□□□ -0.7
AC004540.1-206ENST00000448056 REM2Q8IYK8 340 aaPredicted RBP10.69□□□□□ -0.7
AC004540.1-206ENST00000448056 RALGAPBQ86X10 1494 aa10.68□□□□□ -0.7
AC004540.1-206ENST00000448056 SETD1AO15047 1707 aaKnown RBP10.68□□□□□ -0.7
AC004540.1-206ENST00000448056 KIAA1210Q9ULL0 1709 aa10.68□□□□□ -0.7
AC004540.1-206ENST00000448056 WAPLQ7Z5K2 1190 aa10.68□□□□□ -0.7
AC004540.1-206ENST00000448056 LAMC1P11047 1609 aa10.68□□□□□ -0.7
AC004540.1-206ENST00000448056 TRPM1Q7Z4N2 1603 aa10.68□□□□□ -0.7
AC004540.1-206ENST00000448056 ASXL1Q8IXJ9 1541 aa10.68□□□□□ -0.7
AC004540.1-206ENST00000448056 ROBO2Q9HCK4 1378 aa10.67□□□□□ -0.7
AC004540.1-206ENST00000448056 RBM33Q96EV2 1170 aaKnown RBP10.67□□□□□ -0.7
AC004540.1-206ENST00000448056 PRAM1Q96QH2 718 aa10.67□□□□□ -0.7
AC004540.1-206ENST00000448056 TECPR2O15040 1411 aa10.67□□□□□ -0.7
AC004540.1-206ENST00000448056 CHD2O14647 1828 aaKnown RBP10.66□□□□□ -0.7
AC004540.1-206ENST00000448056 POGKQ9P215 609 aa10.66□□□□□ -0.7
AC004540.1-206ENST00000448056 FAM135BQ49AJ0 1406 aa10.65□□□□□ -0.7
AC004540.1-206ENST00000448056 SAFB2Q14151 953 aaKnown RBP eCLIP10.64□□□□□ -0.71
AC004540.1-206ENST00000448056 PTCH1Q13635 1447 aa10.64□□□□□ -0.71
AC004540.1-206ENST00000448056 NWD1Q149M9 1564 aa10.64□□□□□ -0.71
AC004540.1-206ENST00000448056 TMEM94Q12767 1356 aa10.64□□□□□ -0.71
AC004540.1-206ENST00000448056 PLEKHH1Q9ULM0 1364 aa10.64□□□□□ -0.71
AC004540.1-206ENST00000448056 CENPJQ9HC77 1338 aaPredicted RBP10.63□□□□□ -0.71
AC004540.1-206ENST00000448056 NKTRP30414 1462 aaKnown RBP10.63□□□□□ -0.71
AC004540.1-206ENST00000448056 LTBP4Q8N2S1 1624 aa10.63□□□□□ -0.71
AC004540.1-206ENST00000448056 STRCP1A6NGW2 1772 aa10.63□□□□□ -0.71
AC004540.1-206ENST00000448056 ST20-MTHFSA0A0A6YYL1 179 aa10.63□□□□□ -0.71
AC004540.1-206ENST00000448056 EIF4G2P78344 907 aaKnown RBP eCLIP10.63□□□□□ -0.71
AC004540.1-206ENST00000448056 XRN1Q8IZH2 1706 aaKnown RBP10.63□□□□□ -0.71
AC004540.1-206ENST00000448056 CPS1P31327 1500 aa10.63□□□□□ -0.71
AC004540.1-206ENST00000448056 LRRC7Q96NW7 1537 aa10.63□□□□□ -0.71
AC004540.1-206ENST00000448056 DLC1Q96QB1 1528 aa10.63□□□□□ -0.71
AC004540.1-206ENST00000448056 NCOA3Q9Y6Q9 1424 aa10.62□□□□□ -0.71
AC004540.1-206ENST00000448056 C14orf37Q86TY3 774 aa10.62□□□□□ -0.71
AC004540.1-206ENST00000448056 SPDYE1Q8NFV5 336 aaPredicted RBP10.62□□□□□ -0.71
AC004540.1-206ENST00000448056 C19orf44Q9H6X5 657 aa10.62□□□□□ -0.71
AC004540.1-206ENST00000448056 EIF3AQ14152 1382 aaKnown RBP10.62□□□□□ -0.71
AC004540.1-206ENST00000448056 USP47Q96K76 1375 aa10.62□□□□□ -0.71
AC004540.1-206ENST00000448056 HSPA5P11021 654 aaKnown RBP10.61□□□□□ -0.71
AC004540.1-206ENST00000448056 VASPP50552 380 aaPredicted RBP10.61□□□□□ -0.71
AC004540.1-206ENST00000448056 CERKQ8TCT0 537 aa10.61□□□□□ -0.71
AC004540.1-206ENST00000448056 MINK1Q8N4C8 1332 aaPredicted RBP10.6□□□□□ -0.71
AC004540.1-206ENST00000448056 FBXO41Q8TF61 875 aa10.6□□□□□ -0.71
AC004540.1-206ENST00000448056 TESK2Q96S53 571 aa10.6□□□□□ -0.71
AC004540.1-206ENST00000448056 HIRIP3Q9BW71 556 aaPredicted RBP10.6□□□□□ -0.71
AC004540.1-206ENST00000448056 KNDC1Q76NI1 1749 aa10.59□□□□□ -0.71
AC004540.1-206ENST00000448056 SLC24A1O60721 1099 aa10.59□□□□□ -0.71
AC004540.1-206ENST00000448056 MSH6P52701 1360 aa10.58□□□□□ -0.72
AC004540.1-206ENST00000448056 WASLO00401 505 aaPredicted RBP10.58□□□□□ -0.72
AC004540.1-206ENST00000448056 ATF3P18847 181 aa10.58□□□□□ -0.72
AC004540.1-206ENST00000448056 CDK19Q9BWU1 502 aa10.58□□□□□ -0.72
AC004540.1-206ENST00000448056 CADPS2Q86UW7 1296 aa10.57□□□□□ -0.72
AC004540.1-206ENST00000448056 ADGRL3Q9HAR2 1447 aa10.57□□□□□ -0.72
AC004540.1-206ENST00000448056 EVC2Q86UK5 1308 aa10.57□□□□□ -0.72
AC004540.1-206ENST00000448056 ARHGEF28Q8N1W1 1705 aaKnown RBP10.56□□□□□ -0.72
AC004540.1-206ENST00000448056 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.56□□□□□ -0.72
AC004540.1-206ENST00000448056 SBNO2Q9Y2G9 1366 aa10.56□□□□□ -0.72
AC004540.1-206ENST00000448056 TMF1P82094 1093 aa10.55□□□□□ -0.72
AC004540.1-206ENST00000448056 CABP2Q9NPB3 220 aa10.55□□□□□ -0.72
AC004540.1-206ENST00000448056 SLAIN2Q9P270 581 aa10.55□□□□□ -0.72
AC004540.1-206ENST00000448056 NUTM2FA1L443 756 aa10.54□□□□□ -0.72
AC004540.1-206ENST00000448056 TOM1O60784 492 aa10.54□□□□□ -0.72
AC004540.1-206ENST00000448056 DCCP43146 1447 aa10.54□□□□□ -0.72
AC004540.1-206ENST00000448056 SRPK2P78362 688 aaKnown RBP10.54□□□□□ -0.72
AC004540.1-206ENST00000448056 PUS7Q96PZ0 661 aaKnown RBP10.54□□□□□ -0.72
AC004540.1-206ENST00000448056 CLEC11AQ9Y240 323 aa10.54□□□□□ -0.72
AC004540.1-206ENST00000448056 XIRP1Q702N8 1843 aaKnown RBP10.54□□□□□ -0.72
AC004540.1-206ENST00000448056 C11orf95C9JLR9 678 aaPredicted RBP10.53□□□□□ -0.72
AC004540.1-206ENST00000448056 PITPNM1O00562 1244 aa10.53□□□□□ -0.72
AC004540.1-206ENST00000448056 CDCA8Q53HL2 280 aa10.53□□□□□ -0.72
AC004540.1-206ENST00000448056 NUDT16Q96DE0 195 aaKnown RBP10.53□□□□□ -0.72
AC004540.1-206ENST00000448056 IQSEC2Q5JU85 1478 aa10.53□□□□□ -0.72
AC004540.1-206ENST00000448056 UBAP1LF5GYI3 381 aa10.52□□□□□ -0.73
AC004540.1-206ENST00000448056 QRICH2Q9H0J4 1663 aa10.52□□□□□ -0.73
AC004540.1-206ENST00000448056 DISP3Q9P2K9 1392 aa10.52□□□□□ -0.73
AC004540.1-206ENST00000448056 NALCNQ8IZF0 1738 aa10.51□□□□□ -0.73
AC004540.1-206ENST00000448056 ESCO1Q5FWF5 840 aa10.51□□□□□ -0.73
AC004540.1-206ENST00000448056 IFNLR1Q8IU57 520 aaPredicted RBP10.51□□□□□ -0.73
AC004540.1-206ENST00000448056 ORAI2Q96SN7 254 aa10.51□□□□□ -0.73
AC004540.1-206ENST00000448056 CCDC61Q9Y6R9 512 aa10.51□□□□□ -0.73
AC004540.1-206ENST00000448056 PRR36Q9H6K5 1346 aa10.51□□□□□ -0.73
AC004540.1-206ENST00000448056 ADGRB2O60241 1585 aa10.51□□□□□ -0.73
AC004540.1-206ENST00000448056 MST1RQ04912 1400 aa10.5□□□□□ -0.73
AC004540.1-206ENST00000448056 C1orf167Q5SNV9 1468 aa10.5□□□□□ -0.73
AC004540.1-206ENST00000448056 TULP4Q9NRJ4 1543 aa10.5□□□□□ -0.73
AC004540.1-206ENST00000448056 PRR29P0C7W0 189 aa10.5□□□□□ -0.73
AC004540.1-206ENST00000448056 MIER1Q8N108 512 aa10.5□□□□□ -0.73
AC004540.1-206ENST00000448056 CABP1Q9NZU7 370 aa10.5□□□□□ -0.73
AC004540.1-206ENST00000448056 CDC42BPGQ6DT37 1551 aa10.5□□□□□ -0.73
AC004540.1-206ENST00000448056 PLEKHG3A1L390 1219 aa10.49□□□□□ -0.73
AC004540.1-206ENST00000448056 PIP4K2BP78356 416 aa10.49□□□□□ -0.73
AC004540.1-206ENST00000448056 ANKARQ7Z5J8 1434 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms