RNA–Protein interactions for RNA: ENST00000445704.1

HDAC4-203, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-203ENST00000445704 SIRT1Q96EB6 747 aa27.29■■□□□ 1.96
HDAC4-203ENST00000445704 NHSL1Q5SYE7 1610 aa27.29■■□□□ 1.96
HDAC4-203ENST00000445704 DLC1Q96QB1 1528 aa27.28■■□□□ 1.96
HDAC4-203ENST00000445704 DDX17Q92841 729 aaKnown RBP27.24■■□□□ 1.95
HDAC4-203ENST00000445704 PRAM1Q96QH2 718 aa27.24■■□□□ 1.95
HDAC4-203ENST00000445704 ORAI2Q96SN7 254 aa27.24■■□□□ 1.95
HDAC4-203ENST00000445704 JCADQ9P266 1359 aa27.23■■□□□ 1.95
HDAC4-203ENST00000445704 FMN2Q9NZ56 1722 aa27.22■■□□□ 1.95
HDAC4-203ENST00000445704 TRAK1Q9UPV9 953 aa27.22■■□□□ 1.95
HDAC4-203ENST00000445704 KIAA1210Q9ULL0 1709 aa27.21■■□□□ 1.95
HDAC4-203ENST00000445704 NEUROD1Q13562 356 aa27.21■■□□□ 1.95
HDAC4-203ENST00000445704 SAFB2Q14151 953 aaKnown RBP eCLIP27.21■■□□□ 1.95
HDAC4-203ENST00000445704 L3MBTL2Q969R5 705 aa27.21■■□□□ 1.95
HDAC4-203ENST00000445704 ILDR2Q71H61 639 aa27.2■■□□□ 1.94
HDAC4-203ENST00000445704 SHPRHQ149N8 1683 aa27.18■■□□□ 1.94
HDAC4-203ENST00000445704 NUTM2FA1L443 756 aa27.18■■□□□ 1.94
HDAC4-203ENST00000445704 ARHGEF28Q8N1W1 1705 aaKnown RBP27.17■■□□□ 1.94
HDAC4-203ENST00000445704 POGKQ9P215 609 aa27.17■■□□□ 1.94
HDAC4-203ENST00000445704 ADGRB2O60241 1585 aa27.15■■□□□ 1.94
HDAC4-203ENST00000445704 NBPF1Q3BBV0 1214 aa27.14■■□□□ 1.94
HDAC4-203ENST00000445704 ESCO1Q5FWF5 840 aa27.14■■□□□ 1.94
HDAC4-203ENST00000445704 PHF23Q9BUL5 403 aaPredicted RBP27.13■■□□□ 1.93
HDAC4-203ENST00000445704 LRP6O75581 1613 aa27.12■■□□□ 1.93
HDAC4-203ENST00000445704 SOS2Q07890 1332 aaPredicted RBP27.1■■□□□ 1.93
HDAC4-203ENST00000445704 SPATA31A6Q5VVP1 1343 aa27.1■■□□□ 1.93
HDAC4-203ENST00000445704 MINK1Q8N4C8 1332 aaPredicted RBP27.1■■□□□ 1.93
HDAC4-203ENST00000445704 RGPD8O14715 1765 aaPredicted RBP27.09■■□□□ 1.93
HDAC4-203ENST00000445704 LRRC59Q96AG4 307 aaKnown RBP27.09■■□□□ 1.93
HDAC4-203ENST00000445704 HIRIP3Q9BW71 556 aaPredicted RBP27.09■■□□□ 1.93
HDAC4-203ENST00000445704 USP32Q8NFA0 1604 aa27.08■■□□□ 1.93
HDAC4-203ENST00000445704 RGS17Q9UGC6 210 aaPredicted RBP27.08■■□□□ 1.93
HDAC4-203ENST00000445704 PNPLA6Q8IY17 1366 aa27.08■■□□□ 1.93
HDAC4-203ENST00000445704 TRPM1Q7Z4N2 1603 aa27.07■■□□□ 1.92
HDAC4-203ENST00000445704 PXDNQ92626 1479 aa27.06■■□□□ 1.92
HDAC4-203ENST00000445704 KIF1AQ12756 1690 aa27.06■■□□□ 1.92
HDAC4-203ENST00000445704 FOXO3O43524 673 aa27.05■■□□□ 1.92
HDAC4-203ENST00000445704 NPHP3Q7Z494 1330 aa27.05■■□□□ 1.92
HDAC4-203ENST00000445704 XPCQ01831 940 aaPredicted RBP27.03■■□□□ 1.92
HDAC4-203ENST00000445704 ANKARQ7Z5J8 1434 aa27.03■■□□□ 1.92
HDAC4-203ENST00000445704 TULP4Q9NRJ4 1543 aa27.01■■□□□ 1.91
HDAC4-203ENST00000445704 PRR36Q9H6K5 1346 aa27■■□□□ 1.91
HDAC4-203ENST00000445704 NUTM2BA6NNL0 878 aaPredicted RBP27■■□□□ 1.91
HDAC4-203ENST00000445704 NUTM2EB1AL46 878 aaPredicted RBP27■■□□□ 1.91
HDAC4-203ENST00000445704 WASLO00401 505 aaPredicted RBP27■■□□□ 1.91
HDAC4-203ENST00000445704 NBPF8Q3BBV2 869 aa27■■□□□ 1.91
HDAC4-203ENST00000445704 NUTM2AQ8IVF1 878 aaPredicted RBP27■■□□□ 1.91
HDAC4-203ENST00000445704 PHF8Q9UPP1 1060 aa27■■□□□ 1.91
HDAC4-203ENST00000445704 PCGF6Q9BYE7 350 aa26.99■■□□□ 1.91
HDAC4-203ENST00000445704 TONSLQ96HA7 1378 aa26.98■■□□□ 1.91
HDAC4-203ENST00000445704 COL22A1Q8NFW1 1626 aaPredicted RBP26.96■■□□□ 1.91
HDAC4-203ENST00000445704 EIF3AQ14152 1382 aaKnown RBP26.96■■□□□ 1.91
HDAC4-203ENST00000445704 MEX3CQ5U5Q3 659 aaKnown RBP26.95■■□□□ 1.9
HDAC4-203ENST00000445704 ROCK2O75116 1388 aaKnown RBP26.95■■□□□ 1.9
HDAC4-203ENST00000445704 ATP7BP35670 1465 aa26.93■■□□□ 1.9
HDAC4-203ENST00000445704 POTEAQ6S8J7 498 aa26.93■■□□□ 1.9
HDAC4-203ENST00000445704 PMFBP1Q8TBY8 1022 aa26.93■■□□□ 1.9
HDAC4-203ENST00000445704 CENPJQ9HC77 1338 aaPredicted RBP26.92■■□□□ 1.9
HDAC4-203ENST00000445704 QRICH2Q9H0J4 1663 aa26.92■■□□□ 1.9
HDAC4-203ENST00000445704 KRT28Q7Z3Y7 464 aa26.92■■□□□ 1.9
HDAC4-203ENST00000445704 GPRASP1Q5JY77 1395 aa26.9■■□□□ 1.9
HDAC4-203ENST00000445704 CDK19Q9BWU1 502 aa26.9■■□□□ 1.9
HDAC4-203ENST00000445704 SPATA31A3Q5VYP0 1347 aa26.9■■□□□ 1.9
HDAC4-203ENST00000445704 ITSN1Q15811 1721 aa26.87■■□□□ 1.89
HDAC4-203ENST00000445704 RALGAPBQ86X10 1494 aa26.87■■□□□ 1.89
HDAC4-203ENST00000445704 TOPAZ1Q8N9V7 1692 aa26.87■■□□□ 1.89
HDAC4-203ENST00000445704 NUDT16Q96DE0 195 aaKnown RBP26.87■■□□□ 1.89
HDAC4-203ENST00000445704 TNS3Q68CZ2 1445 aa26.87■■□□□ 1.89
HDAC4-203ENST00000445704 SOCS7O14512 581 aa26.85■■□□□ 1.89
HDAC4-203ENST00000445704 ADAMTS2O95450 1211 aa26.85■■□□□ 1.89
HDAC4-203ENST00000445704 TRPM3Q9HCF6 1732 aaPredicted RBP26.85■■□□□ 1.89
HDAC4-203ENST00000445704 SBNO1A3KN83 1393 aa26.84■■□□□ 1.89
HDAC4-203ENST00000445704 PSME1Q06323 249 aa26.84■■□□□ 1.89
HDAC4-203ENST00000445704 C8orf37Q96NL8 207 aa26.83■■□□□ 1.89
HDAC4-203ENST00000445704 AFF2P51816 1311 aa26.83■■□□□ 1.89
HDAC4-203ENST00000445704 ZNF772Q68DY9 489 aaPredicted RBP26.8■■□□□ 1.88
HDAC4-203ENST00000445704 NGDNQ8NEJ9 315 aaKnown RBP26.79■■□□□ 1.88
HDAC4-203ENST00000445704 CARD11Q9BXL7 1154 aa26.79■■□□□ 1.88
HDAC4-203ENST00000445704 SRPK2P78362 688 aaKnown RBP26.78■■□□□ 1.88
HDAC4-203ENST00000445704 CABP2Q9NPB3 220 aa26.78■■□□□ 1.88
HDAC4-203ENST00000445704 ALS2Q96Q42 1657 aa26.78■■□□□ 1.88
HDAC4-203ENST00000445704 MARF1Q9Y4F3 1742 aaKnown RBP26.77■■□□□ 1.88
HDAC4-203ENST00000445704 CCDC61Q9Y6R9 512 aa26.77■■□□□ 1.88
HDAC4-203ENST00000445704 ABCA3Q99758 1704 aa26.76■■□□□ 1.88
HDAC4-203ENST00000445704 POLR3AO14802 1390 aaPredicted RBP26.75■■□□□ 1.87
HDAC4-203ENST00000445704 ARHGEF10O15013 1369 aa26.75■■□□□ 1.87
HDAC4-203ENST00000445704 LMOD2Q6P5Q4 547 aa26.75■■□□□ 1.87
HDAC4-203ENST00000445704 NGLY1Q96IV0 654 aa26.75■■□□□ 1.87
HDAC4-203ENST00000445704 CLSPNQ9HAW4 1339 aa26.74■■□□□ 1.87
HDAC4-203ENST00000445704 PLEKHG3A1L390 1219 aa26.74■■□□□ 1.87
HDAC4-203ENST00000445704 CABLES1Q8TDN4 633 aa26.74■■□□□ 1.87
HDAC4-203ENST00000445704 PPIP5K1Q6PFW1 1433 aa26.73■■□□□ 1.87
HDAC4-203ENST00000445704 ACEP12821 1306 aa26.73■■□□□ 1.87
HDAC4-203ENST00000445704 PLEKHG5O94827 1062 aa26.73■■□□□ 1.87
HDAC4-203ENST00000445704 EVC2Q86UK5 1308 aa26.72■■□□□ 1.87
HDAC4-203ENST00000445704 SBNO2Q9Y2G9 1366 aa26.7■■□□□ 1.86
HDAC4-203ENST00000445704 FNBP4Q8N3X1 1017 aaPredicted RBP26.69■■□□□ 1.86
HDAC4-203ENST00000445704 PAK3O75914 559 aaPredicted RBP26.68■■□□□ 1.86
HDAC4-203ENST00000445704 CRYBG1Q9Y4K1 1723 aa26.68■■□□□ 1.86
HDAC4-203ENST00000445704 USP21Q9UK80 565 aa26.67■■□□□ 1.86
HDAC4-203ENST00000445704 HAP1P54257 671 aaPredicted RBP26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms