RNA–Protein interactions for RNA: ENST00000445329.5

TRIM6-205, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 2,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-205ENST00000445329 NBPF9Q3BBW0 867 aa8.49□□□□□ -1.05
TRIM6-205ENST00000445329 ZSCAN30Q86W11 494 aa8.49□□□□□ -1.05
TRIM6-205ENST00000445329 SMC4Q9NTJ3 1288 aa8.49□□□□□ -1.05
TRIM6-205ENST00000445329 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.48□□□□□ -1.05
TRIM6-205ENST00000445329 TTC37Q6PGP7 1564 aa8.48□□□□□ -1.05
TRIM6-205ENST00000445329 PPP1R15AO75807 674 aaPredicted RBP8.48□□□□□ -1.05
TRIM6-205ENST00000445329 SGSM3Q96HU1 749 aa8.48□□□□□ -1.05
TRIM6-205ENST00000445329 KIF3AQ9Y496 699 aa8.48□□□□□ -1.05
TRIM6-205ENST00000445329 SPDYE4A6NLX3 237 aa8.48□□□□□ -1.05
TRIM6-205ENST00000445329 CDC42BPAQ5VT25 1732 aa8.47□□□□□ -1.05
TRIM6-205ENST00000445329 BRPF1P55201 1214 aaPredicted RBP8.47□□□□□ -1.05
TRIM6-205ENST00000445329 CALR3Q96L12 384 aaKnown RBP8.47□□□□□ -1.05
TRIM6-205ENST00000445329 RAI14Q9P0K7 980 aa8.47□□□□□ -1.05
TRIM6-205ENST00000445329 GPATCH8Q9UKJ3 1502 aaKnown RBP8.47□□□□□ -1.05
TRIM6-205ENST00000445329 NCAPGQ9BPX3 1015 aa8.47□□□□□ -1.05
TRIM6-205ENST00000445329 MAPKBP1O60336 1514 aa8.47□□□□□ -1.05
TRIM6-205ENST00000445329 TULP2O00295 520 aa8.46□□□□□ -1.05
TRIM6-205ENST00000445329 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.46□□□□□ -1.05
TRIM6-205ENST00000445329 TRERF1Q96PN7 1200 aa8.46□□□□□ -1.05
TRIM6-205ENST00000445329 TERF2IPQ9NYB0 399 aa8.46□□□□□ -1.05
TRIM6-205ENST00000445329 MYOM3Q5VTT5 1437 aa8.46□□□□□ -1.05
TRIM6-205ENST00000445329 OTUD6BQ8N6M0 293 aa8.46□□□□□ -1.06
TRIM6-205ENST00000445329 RRBP1Q9P2E9 1410 aaKnown RBP8.46□□□□□ -1.06
TRIM6-205ENST00000445329 ZNF644Q9H582 1327 aaPredicted RBP8.46□□□□□ -1.06
TRIM6-205ENST00000445329 CCNB3Q8WWL7 1395 aa8.46□□□□□ -1.06
TRIM6-205ENST00000445329 SSR1P43307 286 aaKnown RBP8.46□□□□□ -1.06
TRIM6-205ENST00000445329 CCDC27Q2M243 656 aa8.46□□□□□ -1.06
TRIM6-205ENST00000445329 FGD6Q6ZV73 1430 aa8.46□□□□□ -1.06
TRIM6-205ENST00000445329 CDC42BPBQ9Y5S2 1711 aa8.45□□□□□ -1.06
TRIM6-205ENST00000445329 TMX1Q9H3N1 280 aa8.45□□□□□ -1.06
TRIM6-205ENST00000445329 NBPF6Q5VWK0 638 aa8.44□□□□□ -1.06
TRIM6-205ENST00000445329 NBPF10Q6P3W6 841 aaKnown RBP8.44□□□□□ -1.06
TRIM6-205ENST00000445329 SASS6Q6UVJ0 657 aa8.44□□□□□ -1.06
TRIM6-205ENST00000445329 NBPF5PQ86XG9 351 aaPredicted RBP8.44□□□□□ -1.06
TRIM6-205ENST00000445329 TMTC2Q8N394 836 aa8.44□□□□□ -1.06
TRIM6-205ENST00000445329 NBPF4Q96M43 638 aa8.44□□□□□ -1.06
TRIM6-205ENST00000445329 ARMCX6Q7L4S7 300 aa8.44□□□□□ -1.06
TRIM6-205ENST00000445329 ABCA9Q8IUA7 1624 aa8.44□□□□□ -1.06
TRIM6-205ENST00000445329 CT47B1P0C2W7 299 aaPredicted RBP8.43□□□□□ -1.06
TRIM6-205ENST00000445329 TDO2P48775 406 aa8.43□□□□□ -1.06
TRIM6-205ENST00000445329 XPCQ01831 940 aaPredicted RBP8.43□□□□□ -1.06
TRIM6-205ENST00000445329 BECN1Q14457 450 aa8.43□□□□□ -1.06
TRIM6-205ENST00000445329 DNAJC21Q5F1R6 531 aaKnown RBP8.43□□□□□ -1.06
TRIM6-205ENST00000445329 PIK3R5Q8WYR1 880 aa8.43□□□□□ -1.06
TRIM6-205ENST00000445329 PTPN23Q9H3S7 1636 aa8.43□□□□□ -1.06
TRIM6-205ENST00000445329 ZNF428Q96B54 188 aa8.43□□□□□ -1.06
TRIM6-205ENST00000445329 FEZ2Q9UHY8 353 aaPredicted RBP8.43□□□□□ -1.06
TRIM6-205ENST00000445329 MYO5CQ9NQX4 1742 aa8.43□□□□□ -1.06
TRIM6-205ENST00000445329 PREX2Q70Z35 1606 aa8.43□□□□□ -1.06
TRIM6-205ENST00000445329 CALCOCO1Q9P1Z2 691 aa8.43□□□□□ -1.06
TRIM6-205ENST00000445329 CFDP1Q9UEE9 299 aaPredicted RBP8.43□□□□□ -1.06
TRIM6-205ENST00000445329 ZNF777Q9ULD5 760 aaPredicted RBP8.43□□□□□ -1.06
TRIM6-205ENST00000445329 AKNAQ7Z591 1439 aa8.42□□□□□ -1.06
TRIM6-205ENST00000445329 KDM4AO75164 1064 aa8.42□□□□□ -1.06
TRIM6-205ENST00000445329 CASC1Q6TDU7 716 aa8.42□□□□□ -1.06
TRIM6-205ENST00000445329 RSPH14Q9UHP6 348 aa8.42□□□□□ -1.06
TRIM6-205ENST00000445329 MRVI1Q9Y6F6 885 aa8.42□□□□□ -1.06
TRIM6-205ENST00000445329 ITSN2Q9NZM3 1697 aa8.42□□□□□ -1.06
TRIM6-205ENST00000445329 BORCS6Q96GS4 357 aa8.42□□□□□ -1.06
TRIM6-205ENST00000445329 SLKQ9H2G2 1235 aaPredicted RBP8.42□□□□□ -1.06
TRIM6-205ENST00000445329 DIP2BQ9P265 1576 aa8.42□□□□□ -1.06
TRIM6-205ENST00000445329 KIF13AQ9H1H9 1805 aa8.41□□□□□ -1.06
TRIM6-205ENST00000445329 PLCH2O75038 1416 aa8.41□□□□□ -1.06
TRIM6-205ENST00000445329 MIA2Q96PC5 1412 aa8.41□□□□□ -1.06
TRIM6-205ENST00000445329 DHX57Q6P158 1386 aaKnown RBP8.41□□□□□ -1.06
TRIM6-205ENST00000445329 MPHOSPH10O00566 681 aaKnown RBP8.41□□□□□ -1.06
TRIM6-205ENST00000445329 FAM69CQ0P6D2 419 aa8.41□□□□□ -1.06
TRIM6-205ENST00000445329 TOMM22Q9NS69 142 aa8.41□□□□□ -1.06
TRIM6-205ENST00000445329 TCOF1Q13428 1488 aaKnown RBP8.41□□□□□ -1.06
TRIM6-205ENST00000445329 KIF16BQ96L93 1317 aa8.41□□□□□ -1.06
TRIM6-205ENST00000445329 SAMD9LQ8IVG5 1584 aa8.4□□□□□ -1.06
TRIM6-205ENST00000445329 ARHGAP5Q13017 1502 aa8.4□□□□□ -1.06
TRIM6-205ENST00000445329 PTPRKQ15262 1439 aa8.4□□□□□ -1.06
TRIM6-205ENST00000445329 ZNF853P0CG23 659 aa8.4□□□□□ -1.06
TRIM6-205ENST00000445329 FOXD4L6Q3SYB3 417 aaPredicted RBP8.4□□□□□ -1.06
TRIM6-205ENST00000445329 FOXD4L3Q6VB84 417 aaPredicted RBP8.4□□□□□ -1.06
TRIM6-205ENST00000445329 ZNF710Q8N1W2 664 aa8.4□□□□□ -1.06
TRIM6-205ENST00000445329 CAMSAP2Q08AD1 1489 aa8.4□□□□□ -1.07
TRIM6-205ENST00000445329 CD109Q6YHK3 1445 aa8.4□□□□□ -1.07
TRIM6-205ENST00000445329 CCDC173Q0VFZ6 552 aa8.4□□□□□ -1.07
TRIM6-205ENST00000445329 CSPP1Q1MSJ5 1256 aa8.4□□□□□ -1.07
TRIM6-205ENST00000445329 DNAJC14Q6Y2X3 702 aaPredicted RBP8.4□□□□□ -1.07
TRIM6-205ENST00000445329 TSC1Q92574 1164 aa8.4□□□□□ -1.07
TRIM6-205ENST00000445329 JARID2Q92833 1246 aaPredicted RBP8.4□□□□□ -1.07
TRIM6-205ENST00000445329 PANK3Q9H999 370 aa8.4□□□□□ -1.07
TRIM6-205ENST00000445329 UPF2Q9HAU5 1272 aaKnown RBP8.4□□□□□ -1.07
TRIM6-205ENST00000445329 MAP3K4Q9Y6R4 1608 aa8.39□□□□□ -1.07
TRIM6-205ENST00000445329 GLI2P10070 1586 aa8.39□□□□□ -1.07
TRIM6-205ENST00000445329 NOP2P46087 812 aaKnown RBP8.39□□□□□ -1.07
TRIM6-205ENST00000445329 MFAP1P55081 439 aaKnown RBP8.39□□□□□ -1.07
TRIM6-205ENST00000445329 DONSONQ9NYP3 566 aa8.39□□□□□ -1.07
TRIM6-205ENST00000445329 TSPOAP1O95153 1857 aa8.39□□□□□ -1.07
TRIM6-205ENST00000445329 ERICH4A6NGS2 130 aa8.39□□□□□ -1.07
TRIM6-205ENST00000445329 DHX16O60231 1041 aaKnown RBP8.39□□□□□ -1.07
TRIM6-205ENST00000445329 HNRNPMP52272 730 aaKnown RBP eCLIP8.39□□□□□ -1.07
TRIM6-205ENST00000445329 BIRC2Q13490 618 aa8.39□□□□□ -1.07
TRIM6-205ENST00000445329 ZKSCAN8Q15776 578 aaPredicted RBP8.39□□□□□ -1.07
TRIM6-205ENST00000445329 CCDC96Q2M329 555 aa8.39□□□□□ -1.07
TRIM6-205ENST00000445329 ARHGEF12Q9NZN5 1544 aa8.38□□□□□ -1.07
TRIM6-205ENST00000445329 IPO8O15397 1037 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms