RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 TIMELESSQ9UNS1 1208 aa17.5■□□□□ 0.39
LTBR-204ENST00000444814 KIAA1210Q9ULL0 1709 aa17.5■□□□□ 0.39
LTBR-204ENST00000444814 MYT1Q01538 1121 aa17.49■□□□□ 0.39
LTBR-204ENST00000444814 ASXL1Q8IXJ9 1541 aa17.49■□□□□ 0.39
LTBR-204ENST00000444814 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.48■□□□□ 0.39
LTBR-204ENST00000444814 PRAM1Q96QH2 718 aa17.48■□□□□ 0.39
LTBR-204ENST00000444814 TRAK1Q9UPV9 953 aa17.48■□□□□ 0.39
LTBR-204ENST00000444814 ADGRB1O14514 1584 aa17.47■□□□□ 0.39
LTBR-204ENST00000444814 EIF3AQ14152 1382 aaKnown RBP17.47■□□□□ 0.39
LTBR-204ENST00000444814 WAPLQ7Z5K2 1190 aa17.46■□□□□ 0.39
LTBR-204ENST00000444814 HSPA1LP34931 641 aa17.45■□□□□ 0.38
LTBR-204ENST00000444814 ROCK2O75116 1388 aaKnown RBP17.45■□□□□ 0.38
LTBR-204ENST00000444814 CDC42BPGQ6DT37 1551 aa17.44■□□□□ 0.38
LTBR-204ENST00000444814 NALCNQ8IZF0 1738 aa17.43■□□□□ 0.38
LTBR-204ENST00000444814 MST1RQ04912 1400 aa17.43■□□□□ 0.38
LTBR-204ENST00000444814 ROBO1Q9Y6N7 1651 aa17.41■□□□□ 0.38
LTBR-204ENST00000444814 SAFB2Q14151 953 aaKnown RBP eCLIP17.4■□□□□ 0.38
LTBR-204ENST00000444814 C1orf167Q5SNV9 1468 aa17.4■□□□□ 0.38
LTBR-204ENST00000444814 PLEKHH1Q9ULM0 1364 aa17.4■□□□□ 0.38
LTBR-204ENST00000444814 BRINP3Q76B58 766 aa17.4■□□□□ 0.38
LTBR-204ENST00000444814 NBPF1Q3BBV0 1214 aa17.39■□□□□ 0.37
LTBR-204ENST00000444814 ESCO1Q5FWF5 840 aa17.37■□□□□ 0.37
LTBR-204ENST00000444814 CENPJQ9HC77 1338 aaPredicted RBP17.37■□□□□ 0.37
LTBR-204ENST00000444814 CARD11Q9BXL7 1154 aa17.36■□□□□ 0.37
LTBR-204ENST00000444814 MINK1Q8N4C8 1332 aaPredicted RBP17.36■□□□□ 0.37
LTBR-204ENST00000444814 ANKARQ7Z5J8 1434 aa17.36■□□□□ 0.37
LTBR-204ENST00000444814 TRPM1Q7Z4N2 1603 aa17.36■□□□□ 0.37
LTBR-204ENST00000444814 NPHP3Q7Z494 1330 aa17.36■□□□□ 0.37
LTBR-204ENST00000444814 ADGRB2O60241 1585 aa17.35■□□□□ 0.37
LTBR-204ENST00000444814 WASLO00401 505 aaPredicted RBP17.35■□□□□ 0.37
LTBR-204ENST00000444814 GPRASP1Q5JY77 1395 aa17.35■□□□□ 0.37
LTBR-204ENST00000444814 AHDC1Q5TGY3 1603 aaPredicted RBP17.35■□□□□ 0.37
LTBR-204ENST00000444814 RALGAPBQ86X10 1494 aa17.34■□□□□ 0.37
LTBR-204ENST00000444814 LRRC59Q96AG4 307 aaKnown RBP17.34■□□□□ 0.37
LTBR-204ENST00000444814 JCADQ9P266 1359 aa17.33■□□□□ 0.37
LTBR-204ENST00000444814 NBPF8Q3BBV2 869 aa17.33■□□□□ 0.37
LTBR-204ENST00000444814 PHLPP1O60346 1717 aa17.33■□□□□ 0.36
LTBR-204ENST00000444814 ARHGEF28Q8N1W1 1705 aaKnown RBP17.33■□□□□ 0.36
LTBR-204ENST00000444814 HIRIP3Q9BW71 556 aaPredicted RBP17.32■□□□□ 0.36
LTBR-204ENST00000444814 NUTM2FA1L443 756 aa17.32■□□□□ 0.36
LTBR-204ENST00000444814 FMN2Q9NZ56 1722 aa17.31■□□□□ 0.36
LTBR-204ENST00000444814 PSME1Q06323 249 aa17.31■□□□□ 0.36
LTBR-204ENST00000444814 ORAI2Q96SN7 254 aa17.31■□□□□ 0.36
LTBR-204ENST00000444814 PHF8Q9UPP1 1060 aa17.3■□□□□ 0.36
LTBR-204ENST00000444814 KIF1AQ12756 1690 aa17.3■□□□□ 0.36
LTBR-204ENST00000444814 EVC2Q86UK5 1308 aa17.29■□□□□ 0.36
LTBR-204ENST00000444814 TULP4Q9NRJ4 1543 aa17.29■□□□□ 0.36
LTBR-204ENST00000444814 SPATA31A6Q5VVP1 1343 aa17.29■□□□□ 0.36
LTBR-204ENST00000444814 SRPK2P78362 688 aaKnown RBP17.28■□□□□ 0.36
LTBR-204ENST00000444814 CDK19Q9BWU1 502 aa17.28■□□□□ 0.36
LTBR-204ENST00000444814 NHSL1Q5SYE7 1610 aa17.26■□□□□ 0.35
LTBR-204ENST00000444814 SOS2Q07890 1332 aaPredicted RBP17.26■□□□□ 0.35
LTBR-204ENST00000444814 FOXO3O43524 673 aa17.26■□□□□ 0.35
LTBR-204ENST00000444814 CCDC61Q9Y6R9 512 aa17.26■□□□□ 0.35
LTBR-204ENST00000444814 COL16A1Q07092 1604 aaPredicted RBP17.25■□□□□ 0.35
LTBR-204ENST00000444814 NGDNQ8NEJ9 315 aaKnown RBP17.25■□□□□ 0.35
LTBR-204ENST00000444814 NUDT16Q96DE0 195 aaKnown RBP17.25■□□□□ 0.35
LTBR-204ENST00000444814 SBNO2Q9Y2G9 1366 aa17.25■□□□□ 0.35
LTBR-204ENST00000444814 QRICH2Q9H0J4 1663 aa17.23■□□□□ 0.35
LTBR-204ENST00000444814 KRT28Q7Z3Y7 464 aa17.23■□□□□ 0.35
LTBR-204ENST00000444814 NCBP3Q53F19 620 aaKnown RBP17.22■□□□□ 0.35
LTBR-204ENST00000444814 MEX3CQ5U5Q3 659 aaKnown RBP17.22■□□□□ 0.35
LTBR-204ENST00000444814 ATAD2Q6PL18 1390 aa17.21■□□□□ 0.35
LTBR-204ENST00000444814 DISP3Q9P2K9 1392 aa17.21■□□□□ 0.35
LTBR-204ENST00000444814 ITSN1Q15811 1721 aa17.21■□□□□ 0.35
LTBR-204ENST00000444814 PMFBP1Q8TBY8 1022 aa17.2■□□□□ 0.34
LTBR-204ENST00000444814 SBNO1A3KN83 1393 aa17.2■□□□□ 0.34
LTBR-204ENST00000444814 CDCA8Q53HL2 280 aa17.19■□□□□ 0.34
LTBR-204ENST00000444814 DDX17Q92841 729 aaKnown RBP17.19■□□□□ 0.34
LTBR-204ENST00000444814 ATP7BP35670 1465 aa17.19■□□□□ 0.34
LTBR-204ENST00000444814 SHPRHQ149N8 1683 aa17.19■□□□□ 0.34
LTBR-204ENST00000444814 ARHGEF10O15013 1369 aa17.19■□□□□ 0.34
LTBR-204ENST00000444814 PUS7Q96PZ0 661 aaKnown RBP17.19■□□□□ 0.34
LTBR-204ENST00000444814 PRR36Q9H6K5 1346 aa17.18■□□□□ 0.34
LTBR-204ENST00000444814 MED1Q15648 1581 aaPredicted RBP17.18■□□□□ 0.34
LTBR-204ENST00000444814 USP47Q96K76 1375 aa17.18■□□□□ 0.34
LTBR-204ENST00000444814 PLEKHG3A1L390 1219 aa17.18■□□□□ 0.34
LTBR-204ENST00000444814 CABP2Q9NPB3 220 aa17.18■□□□□ 0.34
LTBR-204ENST00000444814 BRD4O60885 1362 aaPredicted RBP17.17■□□□□ 0.34
LTBR-204ENST00000444814 PNPLA6Q8IY17 1366 aa17.17■□□□□ 0.34
LTBR-204ENST00000444814 PXDNQ92626 1479 aa17.17■□□□□ 0.34
LTBR-204ENST00000444814 HAP1P54257 671 aaPredicted RBP17.16■□□□□ 0.34
LTBR-204ENST00000444814 TMF1P82094 1093 aa17.16■□□□□ 0.34
LTBR-204ENST00000444814 XPCQ01831 940 aaPredicted RBP17.16■□□□□ 0.34
LTBR-204ENST00000444814 SPATA31A3Q5VYP0 1347 aa17.16■□□□□ 0.34
LTBR-204ENST00000444814 PPIP5K1Q6PFW1 1433 aa17.16■□□□□ 0.34
LTBR-204ENST00000444814 USP32Q8NFA0 1604 aa17.16■□□□□ 0.34
LTBR-204ENST00000444814 ST20-MTHFSA0A0A6YYL1 179 aa17.15■□□□□ 0.34
LTBR-204ENST00000444814 NUTM2BA6NNL0 878 aaPredicted RBP17.15■□□□□ 0.34
LTBR-204ENST00000444814 NUTM2EB1AL46 878 aaPredicted RBP17.15■□□□□ 0.34
LTBR-204ENST00000444814 LMOD2Q6P5Q4 547 aa17.15■□□□□ 0.34
LTBR-204ENST00000444814 NUTM2AQ8IVF1 878 aaPredicted RBP17.15■□□□□ 0.34
LTBR-204ENST00000444814 TNS3Q68CZ2 1445 aa17.15■□□□□ 0.34
LTBR-204ENST00000444814 CACNB1Q02641 598 aaPredicted RBP17.15■□□□□ 0.34
LTBR-204ENST00000444814 PELP1Q8IZL8 1130 aaKnown RBP17.15■□□□□ 0.34
LTBR-204ENST00000444814 ZNF692Q9BU19 519 aaPredicted RBP17.15■□□□□ 0.34
LTBR-204ENST00000444814 PAK3O75914 559 aaPredicted RBP17.14■□□□□ 0.33
LTBR-204ENST00000444814 POLR3AO14802 1390 aaPredicted RBP17.14■□□□□ 0.33
LTBR-204ENST00000444814 ACEP12821 1306 aa17.13■□□□□ 0.33
LTBR-204ENST00000444814 EIF4G2P78344 907 aaKnown RBP eCLIP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms