RNA–Protein interactions for RNA: ENST00000444719.5

LMBR1-211, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-211ENST00000444719 NHSL1Q5SYE7 1610 aa32.46■■■□□ 2.79
LMBR1-211ENST00000444719 CDC42BPGQ6DT37 1551 aa32.42■■■□□ 2.78
LMBR1-211ENST00000444719 NUTM2FA1L443 756 aa32.42■■■□□ 2.78
LMBR1-211ENST00000444719 STAC3Q96MF2 364 aa32.42■■■□□ 2.78
LMBR1-211ENST00000444719 SAFB2Q14151 953 aaKnown RBP eCLIP32.41■■■□□ 2.78
LMBR1-211ENST00000444719 SIRT1Q96EB6 747 aa32.4■■■□□ 2.78
LMBR1-211ENST00000444719 PRAM1Q96QH2 718 aa32.39■■■□□ 2.78
LMBR1-211ENST00000444719 SHPRHQ149N8 1683 aa32.39■■■□□ 2.78
LMBR1-211ENST00000444719 ADGRB1O14514 1584 aa32.38■■■□□ 2.77
LMBR1-211ENST00000444719 TRAK1Q9UPV9 953 aa32.38■■■□□ 2.77
LMBR1-211ENST00000444719 ESCO1Q5FWF5 840 aa32.37■■■□□ 2.77
LMBR1-211ENST00000444719 POGKQ9P215 609 aa32.36■■■□□ 2.77
LMBR1-211ENST00000444719 RGS17Q9UGC6 210 aaPredicted RBP32.36■■■□□ 2.77
LMBR1-211ENST00000444719 TRIM26Q12899 539 aaPredicted RBP32.34■■■□□ 2.77
LMBR1-211ENST00000444719 LRRC59Q96AG4 307 aaKnown RBP32.34■■■□□ 2.77
LMBR1-211ENST00000444719 SIN3AQ96ST3 1273 aa32.34■■■□□ 2.77
LMBR1-211ENST00000444719 SPATA31A6Q5VVP1 1343 aa32.33■■■□□ 2.77
LMBR1-211ENST00000444719 FMN2Q9NZ56 1722 aa32.32■■■□□ 2.76
LMBR1-211ENST00000444719 DLC1Q96QB1 1528 aa32.31■■■□□ 2.76
LMBR1-211ENST00000444719 NUTM2BA6NNL0 878 aaPredicted RBP32.31■■■□□ 2.76
LMBR1-211ENST00000444719 NUTM2EB1AL46 878 aaPredicted RBP32.31■■■□□ 2.76
LMBR1-211ENST00000444719 NUTM2AQ8IVF1 878 aaPredicted RBP32.31■■■□□ 2.76
LMBR1-211ENST00000444719 RGPD8O14715 1765 aaPredicted RBP32.31■■■□□ 2.76
LMBR1-211ENST00000444719 LRP6O75581 1613 aa32.3■■■□□ 2.76
LMBR1-211ENST00000444719 SOCS7O14512 581 aa32.29■■■□□ 2.76
LMBR1-211ENST00000444719 NEUROD1Q13562 356 aa32.29■■■□□ 2.76
LMBR1-211ENST00000444719 MEX3CQ5U5Q3 659 aaKnown RBP32.29■■■□□ 2.76
LMBR1-211ENST00000444719 SOS2Q07890 1332 aaPredicted RBP32.26■■■□□ 2.75
LMBR1-211ENST00000444719 FOXO3O43524 673 aa32.25■■■□□ 2.75
LMBR1-211ENST00000444719 HIRIP3Q9BW71 556 aaPredicted RBP32.24■■■□□ 2.75
LMBR1-211ENST00000444719 PNPLA6Q8IY17 1366 aa32.23■■■□□ 2.75
LMBR1-211ENST00000444719 XPCQ01831 940 aaPredicted RBP32.23■■■□□ 2.75
LMBR1-211ENST00000444719 L3MBTL2Q969R5 705 aa32.23■■■□□ 2.75
LMBR1-211ENST00000444719 MINK1Q8N4C8 1332 aaPredicted RBP32.23■■■□□ 2.75
LMBR1-211ENST00000444719 POTEAQ6S8J7 498 aa32.22■■■□□ 2.75
LMBR1-211ENST00000444719 NPHP3Q7Z494 1330 aa32.22■■■□□ 2.75
LMBR1-211ENST00000444719 ARHGEF28Q8N1W1 1705 aaKnown RBP32.21■■■□□ 2.75
LMBR1-211ENST00000444719 KIAA1210Q9ULL0 1709 aa32.21■■■□□ 2.75
LMBR1-211ENST00000444719 NBPF1Q3BBV0 1214 aa32.2■■■□□ 2.75
LMBR1-211ENST00000444719 PXDNQ92626 1479 aa32.16■■■□□ 2.74
LMBR1-211ENST00000444719 ADGRB2O60241 1585 aa32.15■■■□□ 2.74
LMBR1-211ENST00000444719 KIF1AQ12756 1690 aa32.15■■■□□ 2.74
LMBR1-211ENST00000444719 PHF8Q9UPP1 1060 aa32.14■■■□□ 2.74
LMBR1-211ENST00000444719 USP32Q8NFA0 1604 aa32.13■■■□□ 2.73
LMBR1-211ENST00000444719 WASLO00401 505 aaPredicted RBP32.09■■■□□ 2.73
LMBR1-211ENST00000444719 ADAMTS2O95450 1211 aa32.09■■■□□ 2.73
LMBR1-211ENST00000444719 KRT28Q7Z3Y7 464 aa32.09■■■□□ 2.73
LMBR1-211ENST00000444719 PMFBP1Q8TBY8 1022 aa32.09■■■□□ 2.73
LMBR1-211ENST00000444719 C8orf37Q96NL8 207 aa32.08■■■□□ 2.73
LMBR1-211ENST00000444719 ANKARQ7Z5J8 1434 aa32.07■■■□□ 2.72
LMBR1-211ENST00000444719 PRR36Q9H6K5 1346 aa32.05■■■□□ 2.72
LMBR1-211ENST00000444719 COL22A1Q8NFW1 1626 aaPredicted RBP32.05■■■□□ 2.72
LMBR1-211ENST00000444719 ZNF772Q68DY9 489 aaPredicted RBP32.05■■■□□ 2.72
LMBR1-211ENST00000444719 AFF2P51816 1311 aa32.04■■■□□ 2.72
LMBR1-211ENST00000444719 PSME1Q06323 249 aa32.03■■■□□ 2.72
LMBR1-211ENST00000444719 TULP4Q9NRJ4 1543 aa32.03■■■□□ 2.72
LMBR1-211ENST00000444719 TRPM1Q7Z4N2 1603 aa32.02■■■□□ 2.72
LMBR1-211ENST00000444719 SPATA31A3Q5VYP0 1347 aa32.01■■■□□ 2.72
LMBR1-211ENST00000444719 EIF3AQ14152 1382 aaKnown RBP32.01■■■□□ 2.71
LMBR1-211ENST00000444719 NGLY1Q96IV0 654 aa32■■■□□ 2.71
LMBR1-211ENST00000444719 CDK19Q9BWU1 502 aa31.98■■■□□ 2.71
LMBR1-211ENST00000444719 PLEKHG5O94827 1062 aa31.97■■■□□ 2.71
LMBR1-211ENST00000444719 LMOD2Q6P5Q4 547 aa31.96■■■□□ 2.71
LMBR1-211ENST00000444719 NUDT16Q96DE0 195 aaKnown RBP31.96■■■□□ 2.71
LMBR1-211ENST00000444719 NBPF8Q3BBV2 869 aa31.95■■■□□ 2.71
LMBR1-211ENST00000444719 CENPJQ9HC77 1338 aaPredicted RBP31.95■■■□□ 2.7
LMBR1-211ENST00000444719 ITSN1Q15811 1721 aa31.94■■■□□ 2.7
LMBR1-211ENST00000444719 TNS3Q68CZ2 1445 aa31.93■■■□□ 2.7
LMBR1-211ENST00000444719 QRICH2Q9H0J4 1663 aa31.93■■■□□ 2.7
LMBR1-211ENST00000444719 MARF1Q9Y4F3 1742 aaKnown RBP31.93■■■□□ 2.7
LMBR1-211ENST00000444719 ROCK2O75116 1388 aaKnown RBP31.93■■■□□ 2.7
LMBR1-211ENST00000444719 TONSLQ96HA7 1378 aa31.93■■■□□ 2.7
LMBR1-211ENST00000444719 NGDNQ8NEJ9 315 aaKnown RBP31.92■■■□□ 2.7
LMBR1-211ENST00000444719 ATP7BP35670 1465 aa31.91■■■□□ 2.7
LMBR1-211ENST00000444719 SBNO1A3KN83 1393 aa31.91■■■□□ 2.7
LMBR1-211ENST00000444719 RXRBP28702 533 aa31.9■■■□□ 2.7
LMBR1-211ENST00000444719 QTRT2Q9H974 415 aaKnown RBP31.9■■■□□ 2.7
LMBR1-211ENST00000444719 GPRASP1Q5JY77 1395 aa31.9■■■□□ 2.7
LMBR1-211ENST00000444719 CABLES1Q8TDN4 633 aa31.89■■■□□ 2.7
LMBR1-211ENST00000444719 TRPM3Q9HCF6 1732 aaPredicted RBP31.88■■■□□ 2.69
LMBR1-211ENST00000444719 USP21Q9UK80 565 aa31.87■■■□□ 2.69
LMBR1-211ENST00000444719 HAP1P54257 671 aaPredicted RBP31.86■■■□□ 2.69
LMBR1-211ENST00000444719 SRPK2P78362 688 aaKnown RBP31.86■■■□□ 2.69
LMBR1-211ENST00000444719 PAK3O75914 559 aaPredicted RBP31.84■■■□□ 2.69
LMBR1-211ENST00000444719 ARHGEF10O15013 1369 aa31.83■■■□□ 2.69
LMBR1-211ENST00000444719 TOPAZ1Q8N9V7 1692 aa31.83■■■□□ 2.69
LMBR1-211ENST00000444719 FNBP4Q8N3X1 1017 aaPredicted RBP31.83■■■□□ 2.69
LMBR1-211ENST00000444719 PCGF6Q9BYE7 350 aa31.83■■■□□ 2.69
LMBR1-211ENST00000444719 CABP2Q9NPB3 220 aa31.83■■■□□ 2.69
LMBR1-211ENST00000444719 CCDC61Q9Y6R9 512 aa31.83■■■□□ 2.69
LMBR1-211ENST00000444719 ALS2Q96Q42 1657 aa31.81■■■□□ 2.68
LMBR1-211ENST00000444719 ABCA3Q99758 1704 aa31.8■■■□□ 2.68
LMBR1-211ENST00000444719 ACEP12821 1306 aa31.78■■■□□ 2.68
LMBR1-211ENST00000444719 RBM6P78332 1123 aaKnown RBP31.78■■■□□ 2.68
LMBR1-211ENST00000444719 CARD11Q9BXL7 1154 aa31.77■■■□□ 2.68
LMBR1-211ENST00000444719 PLEKHG3A1L390 1219 aa31.76■■■□□ 2.67
LMBR1-211ENST00000444719 TRPC5Q9UL62 973 aaPredicted RBP31.76■■■□□ 2.67
LMBR1-211ENST00000444719 BCL9LQ86UU0 1499 aa31.74■■■□□ 2.67
LMBR1-211ENST00000444719 PPIP5K1Q6PFW1 1433 aa31.74■■■□□ 2.67
LMBR1-211ENST00000444719 EVC2Q86UK5 1308 aa31.74■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms