RNA–Protein interactions for RNA: ENST00000443002.5

POLR2F-206, Transcript of RNA polymerase II subunit F, humanhuman

TSL 2

Gene POLR2F, Length 1,890 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2F-206ENST00000443002 APAF1O14727 1248 aa29.06■■■□□ 2.24
POLR2F-206ENST00000443002 TULP4Q9NRJ4 1543 aa29.05■■■□□ 2.24
POLR2F-206ENST00000443002 CRBNQ96SW2 442 aa29.05■■■□□ 2.24
POLR2F-206ENST00000443002 NKTRP30414 1462 aaKnown RBP29.05■■■□□ 2.24
POLR2F-206ENST00000443002 NCBP3Q53F19 620 aaKnown RBP29.04■■■□□ 2.24
POLR2F-206ENST00000443002 PLIN1O60240 522 aa29.04■■■□□ 2.24
POLR2F-206ENST00000443002 ERICH6Q7L0X2 663 aa29.03■■■□□ 2.24
POLR2F-206ENST00000443002 AGLP35573 1532 aa29.03■■■□□ 2.24
POLR2F-206ENST00000443002 CCDC146Q8IYE0 955 aa29.02■■■□□ 2.24
POLR2F-206ENST00000443002 SHPRHQ149N8 1683 aa29.01■■■□□ 2.23
POLR2F-206ENST00000443002 DIP2BQ9P265 1576 aa28.99■■■□□ 2.23
POLR2F-206ENST00000443002 CFAP53Q96M91 514 aa28.97■■■□□ 2.23
POLR2F-206ENST00000443002 ANP32AP39687 249 aaKnown RBP28.97■■■□□ 2.23
POLR2F-206ENST00000443002 CYB5RLQ6IPT4 315 aa28.96■■■□□ 2.23
POLR2F-206ENST00000443002 RUNDC1Q96C34 613 aa28.95■■■□□ 2.23
POLR2F-206ENST00000443002 MYO5BQ9ULV0 1848 aa28.94■■■□□ 2.22
POLR2F-206ENST00000443002 ATAD2Q6PL18 1390 aa28.94■■■□□ 2.22
POLR2F-206ENST00000443002 PTPRMP28827 1452 aa28.93■■■□□ 2.22
POLR2F-206ENST00000443002 CLTCQ00610 1675 aaKnown RBP28.92■■■□□ 2.22
POLR2F-206ENST00000443002 RIMBP3CA6NJZ7 1639 aa28.92■■■□□ 2.22
POLR2F-206ENST00000443002 RIMBP3BA6NNM3 1639 aa28.92■■■□□ 2.22
POLR2F-206ENST00000443002 RIMBP3Q9UFD9 1639 aa28.92■■■□□ 2.22
POLR2F-206ENST00000443002 FAM69CQ0P6D2 419 aa28.91■■■□□ 2.22
POLR2F-206ENST00000443002 KDM2BQ8NHM5 1336 aa28.91■■■□□ 2.22
POLR2F-206ENST00000443002 IQSEC2Q5JU85 1478 aa28.91■■■□□ 2.22
POLR2F-206ENST00000443002 C20orf194Q5TEA3 1177 aa28.91■■■□□ 2.22
POLR2F-206ENST00000443002 NUTM2DQ5VT03 806 aaPredicted RBP28.91■■■□□ 2.22
POLR2F-206ENST00000443002 CENPQQ7L2Z9 268 aaPredicted RBP28.91■■■□□ 2.22
POLR2F-206ENST00000443002 WWC1Q8IX03 1113 aa28.91■■■□□ 2.22
POLR2F-206ENST00000443002 PHF23Q9BUL5 403 aaPredicted RBP28.91■■■□□ 2.22
POLR2F-206ENST00000443002 ABCC11Q96J66 1382 aa28.9■■■□□ 2.22
POLR2F-206ENST00000443002 CCDC27Q2M243 656 aa28.9■■■□□ 2.22
POLR2F-206ENST00000443002 YTHDC2Q9H6S0 1430 aaKnown RBP28.89■■■□□ 2.22
POLR2F-206ENST00000443002 SPINK5Q9NQ38 1064 aaPredicted RBP28.89■■■□□ 2.22
POLR2F-206ENST00000443002 MED14O60244 1454 aa28.89■■■□□ 2.22
POLR2F-206ENST00000443002 IPO9Q96P70 1041 aaKnown RBP28.89■■■□□ 2.21
POLR2F-206ENST00000443002 MTHFSP49914 203 aa28.88■■■□□ 2.21
POLR2F-206ENST00000443002 WDR63Q8IWG1 891 aa28.88■■■□□ 2.21
POLR2F-206ENST00000443002 BACH2Q9BYV9 841 aa28.87■■■□□ 2.21
POLR2F-206ENST00000443002 NOP58Q9Y2X3 529 aaKnown RBP28.87■■■□□ 2.21
POLR2F-206ENST00000443002 PDE4AP27815 886 aa28.87■■■□□ 2.21
POLR2F-206ENST00000443002 ALKQ9UM73 1620 aa28.86■■■□□ 2.21
POLR2F-206ENST00000443002 CABP2Q9NPB3 220 aa28.85■■■□□ 2.21
POLR2F-206ENST00000443002 PDE3AQ14432 1141 aa28.85■■■□□ 2.21
POLR2F-206ENST00000443002 SPATA31D1Q6ZQQ2 1576 aa28.84■■■□□ 2.21
POLR2F-206ENST00000443002 TERF2IPQ9NYB0 399 aa28.84■■■□□ 2.21
POLR2F-206ENST00000443002 DLC1Q96QB1 1528 aa28.83■■■□□ 2.21
POLR2F-206ENST00000443002 A0A1W2PP64 1363 aa28.82■■■□□ 2.2
POLR2F-206ENST00000443002 TCP11L2Q8N4U5 519 aa28.81■■■□□ 2.2
POLR2F-206ENST00000443002 SRPK2P78362 688 aaKnown RBP28.8■■■□□ 2.2
POLR2F-206ENST00000443002 FBXO31Q5XUX0 539 aaPredicted RBP28.8■■■□□ 2.2
POLR2F-206ENST00000443002 ANKRD26Q9UPS8 1709 aa28.8■■■□□ 2.2
POLR2F-206ENST00000443002 TNNT2P45379 298 aaPredicted RBP28.8■■■□□ 2.2
POLR2F-206ENST00000443002 POGKQ9P215 609 aa28.79■■■□□ 2.2
POLR2F-206ENST00000443002 STK26Q9P289 416 aa28.79■■■□□ 2.2
POLR2F-206ENST00000443002 AAMPQ13685 434 aa28.78■■■□□ 2.2
POLR2F-206ENST00000443002 PRAM1Q96QH2 718 aa28.78■■■□□ 2.2
POLR2F-206ENST00000443002 DMRT2Q9Y5R5 561 aa28.78■■■□□ 2.2
POLR2F-206ENST00000443002 ARHGEF40Q8TER5 1519 aa28.77■■■□□ 2.2
POLR2F-206ENST00000443002 A2ML1A8K2U0 1454 aa28.77■■■□□ 2.2
POLR2F-206ENST00000443002 STAG3Q9UJ98 1225 aa28.76■■■□□ 2.2
POLR2F-206ENST00000443002 ADGRB2O60241 1585 aa28.76■■■□□ 2.19
POLR2F-206ENST00000443002 CD163L1Q9NR16 1453 aa28.75■■■□□ 2.19
POLR2F-206ENST00000443002 BCAR3O75815 825 aa28.74■■■□□ 2.19
POLR2F-206ENST00000443002 ZBTB47Q9UFB7 747 aaPredicted RBP28.73■■■□□ 2.19
POLR2F-206ENST00000443002 SAFB2Q14151 953 aaKnown RBP eCLIP28.72■■■□□ 2.19
POLR2F-206ENST00000443002 HDGFL2Q7Z4V5 671 aaPredicted RBP28.72■■■□□ 2.19
POLR2F-206ENST00000443002 NLRP1Q9C000 1473 aa28.72■■■□□ 2.19
POLR2F-206ENST00000443002 TSPOAP1O95153 1857 aa28.72■■■□□ 2.19
POLR2F-206ENST00000443002 MINK1Q8N4C8 1332 aaPredicted RBP28.71■■■□□ 2.19
POLR2F-206ENST00000443002 MYH16Q9H6N6 1097 aa28.7■■■□□ 2.19
POLR2F-206ENST00000443002 RIMS2Q9UQ26 1411 aa28.7■■■□□ 2.18
POLR2F-206ENST00000443002 COL3A1P02461 1466 aaPredicted RBP28.7■■■□□ 2.18
POLR2F-206ENST00000443002 CT47B1P0C2W7 299 aaPredicted RBP28.7■■■□□ 2.18
POLR2F-206ENST00000443002 FYB1O15117 783 aa28.69■■■□□ 2.18
POLR2F-206ENST00000443002 U2AF1L5P0DN76 240 aaPredicted RBP28.69■■■□□ 2.18
POLR2F-206ENST00000443002 U2AF1Q01081 240 aaKnown RBP eCLIP28.69■■■□□ 2.18
POLR2F-206ENST00000443002 CDK19Q9BWU1 502 aa28.68■■■□□ 2.18
POLR2F-206ENST00000443002 SETD1AO15047 1707 aaKnown RBP28.67■■■□□ 2.18
POLR2F-206ENST00000443002 RARSP54136 660 aaKnown RBP28.67■■■□□ 2.18
POLR2F-206ENST00000443002 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.67■■■□□ 2.18
POLR2F-206ENST00000443002 ATP7BP35670 1465 aa28.67■■■□□ 2.18
POLR2F-206ENST00000443002 PNNQ9H307 717 aaKnown RBP28.66■■■□□ 2.18
POLR2F-206ENST00000443002 PNPLA6Q8IY17 1366 aa28.65■■■□□ 2.18
POLR2F-206ENST00000443002 PAK3O75914 559 aaPredicted RBP28.63■■■□□ 2.17
POLR2F-206ENST00000443002 NEUROD2Q15784 382 aa28.63■■■□□ 2.17
POLR2F-206ENST00000443002 RRP7AQ9Y3A4 280 aaKnown RBP28.63■■■□□ 2.17
POLR2F-206ENST00000443002 PLEKHF1Q96S99 279 aa28.63■■■□□ 2.17
POLR2F-206ENST00000443002 GGNBP2Q9H3C7 697 aa28.63■■■□□ 2.17
POLR2F-206ENST00000443002 SIRT1Q96EB6 747 aa28.62■■■□□ 2.17
POLR2F-206ENST00000443002 KIF20BQ96Q89 1820 aa28.62■■■□□ 2.17
POLR2F-206ENST00000443002 CANXP27824 592 aaKnown RBP28.61■■■□□ 2.17
POLR2F-206ENST00000443002 IL16Q14005 1332 aa28.61■■■□□ 2.17
POLR2F-206ENST00000443002 HDGFP51858 240 aaKnown RBP28.59■■■□□ 2.17
POLR2F-206ENST00000443002 CLUAP1Q96AJ1 413 aa28.59■■■□□ 2.17
POLR2F-206ENST00000443002 FAM161AQ3B820 660 aa28.59■■■□□ 2.17
POLR2F-206ENST00000443002 DDRGK1Q96HY6 314 aa28.59■■■□□ 2.17
POLR2F-206ENST00000443002 CDC42BPGQ6DT37 1551 aa28.59■■■□□ 2.17
POLR2F-206ENST00000443002 CABP1Q9NZU7 370 aa28.58■■■□□ 2.17
POLR2F-206ENST00000443002 TMPOP42166 694 aaKnown RBP28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms