RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 ORAI2Q96SN7 254 aa30.6■■■□□ 2.49
CDKN3-204ENST00000442975 ADGRB1O14514 1584 aa30.59■■■□□ 2.49
CDKN3-204ENST00000442975 STAC3Q96MF2 364 aa30.59■■■□□ 2.49
CDKN3-204ENST00000442975 NUTM2FA1L443 756 aa30.58■■■□□ 2.49
CDKN3-204ENST00000442975 SAFB2Q14151 953 aaKnown RBP eCLIP30.58■■■□□ 2.49
CDKN3-204ENST00000442975 PRAM1Q96QH2 718 aa30.58■■■□□ 2.49
CDKN3-204ENST00000442975 NHSL1Q5SYE7 1610 aa30.58■■■□□ 2.49
CDKN3-204ENST00000442975 SIRT1Q96EB6 747 aa30.55■■■□□ 2.48
CDKN3-204ENST00000442975 POGKQ9P215 609 aa30.55■■■□□ 2.48
CDKN3-204ENST00000442975 SPATA31A6Q5VVP1 1343 aa30.54■■■□□ 2.48
CDKN3-204ENST00000442975 ESCO1Q5FWF5 840 aa30.54■■■□□ 2.48
CDKN3-204ENST00000442975 TRAK1Q9UPV9 953 aa30.54■■■□□ 2.48
CDKN3-204ENST00000442975 DLC1Q96QB1 1528 aa30.53■■■□□ 2.48
CDKN3-204ENST00000442975 LRP6O75581 1613 aa30.51■■■□□ 2.48
CDKN3-204ENST00000442975 TRIM26Q12899 539 aaPredicted RBP30.51■■■□□ 2.47
CDKN3-204ENST00000442975 MEX3CQ5U5Q3 659 aaKnown RBP30.51■■■□□ 2.47
CDKN3-204ENST00000442975 SHPRHQ149N8 1683 aa30.51■■■□□ 2.47
CDKN3-204ENST00000442975 LRRC59Q96AG4 307 aaKnown RBP30.5■■■□□ 2.47
CDKN3-204ENST00000442975 NUTM2BA6NNL0 878 aaPredicted RBP30.48■■■□□ 2.47
CDKN3-204ENST00000442975 NUTM2EB1AL46 878 aaPredicted RBP30.48■■■□□ 2.47
CDKN3-204ENST00000442975 NUTM2AQ8IVF1 878 aaPredicted RBP30.48■■■□□ 2.47
CDKN3-204ENST00000442975 RGS17Q9UGC6 210 aaPredicted RBP30.48■■■□□ 2.47
CDKN3-204ENST00000442975 SOCS7O14512 581 aa30.46■■■□□ 2.47
CDKN3-204ENST00000442975 SIN3AQ96ST3 1273 aa30.46■■■□□ 2.47
CDKN3-204ENST00000442975 PNPLA6Q8IY17 1366 aa30.45■■■□□ 2.47
CDKN3-204ENST00000442975 NPHP3Q7Z494 1330 aa30.45■■■□□ 2.46
CDKN3-204ENST00000442975 FMN2Q9NZ56 1722 aa30.44■■■□□ 2.46
CDKN3-204ENST00000442975 NEUROD1Q13562 356 aa30.44■■■□□ 2.46
CDKN3-204ENST00000442975 SOS2Q07890 1332 aaPredicted RBP30.44■■■□□ 2.46
CDKN3-204ENST00000442975 HIRIP3Q9BW71 556 aaPredicted RBP30.43■■■□□ 2.46
CDKN3-204ENST00000442975 FOXO3O43524 673 aa30.42■■■□□ 2.46
CDKN3-204ENST00000442975 XPCQ01831 940 aaPredicted RBP30.42■■■□□ 2.46
CDKN3-204ENST00000442975 MINK1Q8N4C8 1332 aaPredicted RBP30.42■■■□□ 2.46
CDKN3-204ENST00000442975 L3MBTL2Q969R5 705 aa30.4■■■□□ 2.46
CDKN3-204ENST00000442975 ADGRB2O60241 1585 aa30.38■■■□□ 2.45
CDKN3-204ENST00000442975 PXDNQ92626 1479 aa30.38■■■□□ 2.45
CDKN3-204ENST00000442975 POTEAQ6S8J7 498 aa30.36■■■□□ 2.45
CDKN3-204ENST00000442975 KIF1AQ12756 1690 aa30.34■■■□□ 2.45
CDKN3-204ENST00000442975 NBPF1Q3BBV0 1214 aa30.34■■■□□ 2.45
CDKN3-204ENST00000442975 ANKARQ7Z5J8 1434 aa30.33■■■□□ 2.45
CDKN3-204ENST00000442975 PHF8Q9UPP1 1060 aa30.33■■■□□ 2.45
CDKN3-204ENST00000442975 KIAA1210Q9ULL0 1709 aa30.33■■■□□ 2.45
CDKN3-204ENST00000442975 ARHGEF28Q8N1W1 1705 aaKnown RBP30.32■■■□□ 2.44
CDKN3-204ENST00000442975 EIF3AQ14152 1382 aaKnown RBP30.31■■■□□ 2.44
CDKN3-204ENST00000442975 ADAMTS2O95450 1211 aa30.3■■■□□ 2.44
CDKN3-204ENST00000442975 C8orf37Q96NL8 207 aa30.29■■■□□ 2.44
CDKN3-204ENST00000442975 WASLO00401 505 aaPredicted RBP30.28■■■□□ 2.44
CDKN3-204ENST00000442975 TULP4Q9NRJ4 1543 aa30.27■■■□□ 2.44
CDKN3-204ENST00000442975 ZNF772Q68DY9 489 aaPredicted RBP30.27■■■□□ 2.44
CDKN3-204ENST00000442975 PMFBP1Q8TBY8 1022 aa30.26■■■□□ 2.43
CDKN3-204ENST00000442975 USP32Q8NFA0 1604 aa30.25■■■□□ 2.43
CDKN3-204ENST00000442975 AFF2P51816 1311 aa30.25■■■□□ 2.43
CDKN3-204ENST00000442975 KRT28Q7Z3Y7 464 aa30.25■■■□□ 2.43
CDKN3-204ENST00000442975 PRR36Q9H6K5 1346 aa30.24■■■□□ 2.43
CDKN3-204ENST00000442975 COL22A1Q8NFW1 1626 aaPredicted RBP30.22■■■□□ 2.43
CDKN3-204ENST00000442975 SPATA31A3Q5VYP0 1347 aa30.22■■■□□ 2.43
CDKN3-204ENST00000442975 PSME1Q06323 249 aa30.21■■■□□ 2.43
CDKN3-204ENST00000442975 ROCK2O75116 1388 aaKnown RBP30.2■■■□□ 2.43
CDKN3-204ENST00000442975 TONSLQ96HA7 1378 aa30.2■■■□□ 2.43
CDKN3-204ENST00000442975 RGPD8O14715 1765 aaPredicted RBP30.2■■■□□ 2.42
CDKN3-204ENST00000442975 TNS3Q68CZ2 1445 aa30.2■■■□□ 2.42
CDKN3-204ENST00000442975 NGLY1Q96IV0 654 aa30.19■■■□□ 2.42
CDKN3-204ENST00000442975 CENPJQ9HC77 1338 aaPredicted RBP30.19■■■□□ 2.42
CDKN3-204ENST00000442975 ATP7BP35670 1465 aa30.18■■■□□ 2.42
CDKN3-204ENST00000442975 LMOD2Q6P5Q4 547 aa30.17■■■□□ 2.42
CDKN3-204ENST00000442975 PLEKHG5O94827 1062 aa30.16■■■□□ 2.42
CDKN3-204ENST00000442975 CDK19Q9BWU1 502 aa30.16■■■□□ 2.42
CDKN3-204ENST00000442975 TRPM1Q7Z4N2 1603 aa30.15■■■□□ 2.42
CDKN3-204ENST00000442975 NUDT16Q96DE0 195 aaKnown RBP30.15■■■□□ 2.42
CDKN3-204ENST00000442975 SBNO1A3KN83 1393 aa30.15■■■□□ 2.42
CDKN3-204ENST00000442975 GPRASP1Q5JY77 1395 aa30.15■■■□□ 2.42
CDKN3-204ENST00000442975 NGDNQ8NEJ9 315 aaKnown RBP30.14■■■□□ 2.42
CDKN3-204ENST00000442975 HAP1P54257 671 aaPredicted RBP30.11■■■□□ 2.41
CDKN3-204ENST00000442975 NBPF8Q3BBV2 869 aa30.11■■■□□ 2.41
CDKN3-204ENST00000442975 ARHGEF10O15013 1369 aa30.11■■■□□ 2.41
CDKN3-204ENST00000442975 RXRBP28702 533 aa30.09■■■□□ 2.41
CDKN3-204ENST00000442975 SRPK2P78362 688 aaKnown RBP30.09■■■□□ 2.41
CDKN3-204ENST00000442975 USP21Q9UK80 565 aa30.07■■■□□ 2.4
CDKN3-204ENST00000442975 QRICH2Q9H0J4 1663 aa30.07■■■□□ 2.4
CDKN3-204ENST00000442975 CABLES1Q8TDN4 633 aa30.06■■■□□ 2.4
CDKN3-204ENST00000442975 ITSN1Q15811 1721 aa30.05■■■□□ 2.4
CDKN3-204ENST00000442975 PAK3O75914 559 aaPredicted RBP30.05■■■□□ 2.4
CDKN3-204ENST00000442975 QTRT2Q9H974 415 aaKnown RBP30.05■■■□□ 2.4
CDKN3-204ENST00000442975 CCDC61Q9Y6R9 512 aa30.04■■■□□ 2.4
CDKN3-204ENST00000442975 FNBP4Q8N3X1 1017 aaPredicted RBP30.03■■■□□ 2.4
CDKN3-204ENST00000442975 PCGF6Q9BYE7 350 aa30.03■■■□□ 2.4
CDKN3-204ENST00000442975 CABP2Q9NPB3 220 aa30.03■■■□□ 2.4
CDKN3-204ENST00000442975 RALGAPBQ86X10 1494 aa30.01■■■□□ 2.4
CDKN3-204ENST00000442975 TRPM3Q9HCF6 1732 aaPredicted RBP30.01■■■□□ 2.39
CDKN3-204ENST00000442975 TOPAZ1Q8N9V7 1692 aa30.01■■■□□ 2.39
CDKN3-204ENST00000442975 CARD11Q9BXL7 1154 aa30■■■□□ 2.39
CDKN3-204ENST00000442975 PPIP5K1Q6PFW1 1433 aa29.99■■■□□ 2.39
CDKN3-204ENST00000442975 RBM6P78332 1123 aaKnown RBP29.99■■■□□ 2.39
CDKN3-204ENST00000442975 TRPC5Q9UL62 973 aaPredicted RBP29.99■■■□□ 2.39
CDKN3-204ENST00000442975 ACEP12821 1306 aa29.98■■■□□ 2.39
CDKN3-204ENST00000442975 POLR3AO14802 1390 aaPredicted RBP29.97■■■□□ 2.39
CDKN3-204ENST00000442975 EVC2Q86UK5 1308 aa29.96■■■□□ 2.39
CDKN3-204ENST00000442975 CDK12Q9NYV4 1490 aaPredicted RBP29.96■■■□□ 2.39
CDKN3-204ENST00000442975 PLEKHG3A1L390 1219 aa29.95■■■□□ 2.39
CDKN3-204ENST00000442975 RGS12O14924 1447 aa29.95■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms