RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 BRINP3Q76B58 766 aa6.63□□□□□ -1.35
EDEM3-203ENST00000439962 CABLES1Q8TDN4 633 aa6.63□□□□□ -1.35
EDEM3-203ENST00000439962 NEXMIFQ5QGS0 1516 aa6.62□□□□□ -1.35
EDEM3-203ENST00000439962 SRPK2P78362 688 aaKnown RBP6.62□□□□□ -1.35
EDEM3-203ENST00000439962 SPATA31E1Q6ZUB1 1445 aa6.61□□□□□ -1.35
EDEM3-203ENST00000439962 RPGRIP1LQ68CZ1 1315 aa6.61□□□□□ -1.35
EDEM3-203ENST00000439962 C8orf37Q96NL8 207 aa6.61□□□□□ -1.35
EDEM3-203ENST00000439962 GTF3C3Q9Y5Q9 886 aa6.61□□□□□ -1.35
EDEM3-203ENST00000439962 NBPF8Q3BBV2 869 aa6.61□□□□□ -1.35
EDEM3-203ENST00000439962 C14orf93Q9H972 538 aaKnown RBP6.61□□□□□ -1.35
EDEM3-203ENST00000439962 CABP2Q9NPB3 220 aa6.6□□□□□ -1.35
EDEM3-203ENST00000439962 CPS1P31327 1500 aa6.6□□□□□ -1.35
EDEM3-203ENST00000439962 PSME1Q06323 249 aa6.59□□□□□ -1.35
EDEM3-203ENST00000439962 NGDNQ8NEJ9 315 aaKnown RBP6.59□□□□□ -1.35
EDEM3-203ENST00000439962 TMC1Q8TDI8 760 aa6.59□□□□□ -1.35
EDEM3-203ENST00000439962 CARD11Q9BXL7 1154 aa6.59□□□□□ -1.35
EDEM3-203ENST00000439962 ALKQ9UM73 1620 aa6.59□□□□□ -1.35
EDEM3-203ENST00000439962 YTHDC2Q9H6S0 1430 aaKnown RBP6.59□□□□□ -1.35
EDEM3-203ENST00000439962 A0A0G2JS52 829 aa6.59□□□□□ -1.36
EDEM3-203ENST00000439962 MYT1Q01538 1121 aa6.59□□□□□ -1.36
EDEM3-203ENST00000439962 ROCK2O75116 1388 aaKnown RBP6.58□□□□□ -1.36
EDEM3-203ENST00000439962 NRXN3Q9Y4C0 1643 aa6.58□□□□□ -1.36
EDEM3-203ENST00000439962 NGLY1Q96IV0 654 aa6.57□□□□□ -1.36
EDEM3-203ENST00000439962 CDK19Q9BWU1 502 aa6.57□□□□□ -1.36
EDEM3-203ENST00000439962 USP35Q9P2H5 1018 aa6.57□□□□□ -1.36
EDEM3-203ENST00000439962 CCDC9Q9Y3X0 531 aaKnown RBP6.57□□□□□ -1.36
EDEM3-203ENST00000439962 PIK3C2GO75747 1445 aa6.57□□□□□ -1.36
EDEM3-203ENST00000439962 CHD2O14647 1828 aaKnown RBP6.57□□□□□ -1.36
EDEM3-203ENST00000439962 XIRP1Q702N8 1843 aaKnown RBP6.56□□□□□ -1.36
EDEM3-203ENST00000439962 LAMC1P11047 1609 aa6.56□□□□□ -1.36
EDEM3-203ENST00000439962 KRT28Q7Z3Y7 464 aa6.56□□□□□ -1.36
EDEM3-203ENST00000439962 PHF8Q9UPP1 1060 aa6.56□□□□□ -1.36
EDEM3-203ENST00000439962 ROBO1Q9Y6N7 1651 aa6.56□□□□□ -1.36
EDEM3-203ENST00000439962 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.55□□□□□ -1.36
EDEM3-203ENST00000439962 PPLO60437 1756 aa6.55□□□□□ -1.36
EDEM3-203ENST00000439962 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.55□□□□□ -1.36
EDEM3-203ENST00000439962 LRPPRCP42704 1394 aaKnown RBP6.55□□□□□ -1.36
EDEM3-203ENST00000439962 ZC3H6P61129 1189 aaKnown RBP6.55□□□□□ -1.36
EDEM3-203ENST00000439962 NKTRP30414 1462 aaKnown RBP6.55□□□□□ -1.36
EDEM3-203ENST00000439962 ADGRL3Q9HAR2 1447 aa6.55□□□□□ -1.36
EDEM3-203ENST00000439962 ST20-MTHFSA0A0A6YYL1 179 aa6.55□□□□□ -1.36
EDEM3-203ENST00000439962 POTEAQ6S8J7 498 aa6.55□□□□□ -1.36
EDEM3-203ENST00000439962 LRRC59Q96AG4 307 aaKnown RBP6.55□□□□□ -1.36
EDEM3-203ENST00000439962 NUDT16Q96DE0 195 aaKnown RBP6.55□□□□□ -1.36
EDEM3-203ENST00000439962 CABP1Q9NZU7 370 aa6.55□□□□□ -1.36
EDEM3-203ENST00000439962 PIK3R4Q99570 1358 aa6.54□□□□□ -1.36
EDEM3-203ENST00000439962 PRR36Q9H6K5 1346 aa6.54□□□□□ -1.36
EDEM3-203ENST00000439962 CENPJQ9HC77 1338 aaPredicted RBP6.54□□□□□ -1.36
EDEM3-203ENST00000439962 WASLO00401 505 aaPredicted RBP6.54□□□□□ -1.36
EDEM3-203ENST00000439962 CHRNA2Q15822 529 aa6.54□□□□□ -1.36
EDEM3-203ENST00000439962 SETBP1Q9Y6X0 1596 aa6.54□□□□□ -1.36
EDEM3-203ENST00000439962 C1orf167Q5SNV9 1468 aa6.54□□□□□ -1.36
EDEM3-203ENST00000439962 MST1RQ04912 1400 aa6.54□□□□□ -1.36
EDEM3-203ENST00000439962 ANP32CO43423 234 aa6.54□□□□□ -1.36
EDEM3-203ENST00000439962 ASXL1Q8IXJ9 1541 aa6.54□□□□□ -1.36
EDEM3-203ENST00000439962 RGS17Q9UGC6 210 aaPredicted RBP6.53□□□□□ -1.36
EDEM3-203ENST00000439962 ABCC11Q96J66 1382 aa6.53□□□□□ -1.36
EDEM3-203ENST00000439962 KDM5AP29375 1690 aaKnown RBP6.53□□□□□ -1.36
EDEM3-203ENST00000439962 STRN4Q9NRL3 753 aa6.53□□□□□ -1.36
EDEM3-203ENST00000439962 FAM135BQ49AJ0 1406 aa6.53□□□□□ -1.36
EDEM3-203ENST00000439962 NPHP3Q7Z494 1330 aa6.52□□□□□ -1.36
EDEM3-203ENST00000439962 FBLN1P23142 703 aa6.52□□□□□ -1.37
EDEM3-203ENST00000439962 FAM182BQ5T319 152 aa6.52□□□□□ -1.37
EDEM3-203ENST00000439962 ABTB2Q8N961 1025 aa6.52□□□□□ -1.37
EDEM3-203ENST00000439962 PRAG1Q86YV5 1406 aa6.52□□□□□ -1.37
EDEM3-203ENST00000439962 NALCNQ8IZF0 1738 aa6.52□□□□□ -1.37
EDEM3-203ENST00000439962 SLC12A5Q9H2X9 1139 aa6.52□□□□□ -1.37
EDEM3-203ENST00000439962 RALGAPBQ86X10 1494 aa6.52□□□□□ -1.37
EDEM3-203ENST00000439962 ACEP12821 1306 aa6.52□□□□□ -1.37
EDEM3-203ENST00000439962 AFF2P51816 1311 aa6.52□□□□□ -1.37
EDEM3-203ENST00000439962 EIF4G2P78344 907 aaKnown RBP eCLIP6.51□□□□□ -1.37
EDEM3-203ENST00000439962 JCADQ9P266 1359 aa6.51□□□□□ -1.37
EDEM3-203ENST00000439962 TNNT2P45379 298 aaPredicted RBP6.51□□□□□ -1.37
EDEM3-203ENST00000439962 QTRT2Q9H974 415 aaKnown RBP6.51□□□□□ -1.37
EDEM3-203ENST00000439962 ZRANB1Q9UGI0 708 aa6.51□□□□□ -1.37
EDEM3-203ENST00000439962 PHLPP1O60346 1717 aa6.51□□□□□ -1.37
EDEM3-203ENST00000439962 YTHDC1Q96MU7 727 aaKnown RBP6.5□□□□□ -1.37
EDEM3-203ENST00000439962 USP21Q9UK80 565 aa6.5□□□□□ -1.37
EDEM3-203ENST00000439962 CCDC61Q9Y6R9 512 aa6.5□□□□□ -1.37
EDEM3-203ENST00000439962 PTCH1Q13635 1447 aa6.5□□□□□ -1.37
EDEM3-203ENST00000439962 RGPD8O14715 1765 aaPredicted RBP6.5□□□□□ -1.37
EDEM3-203ENST00000439962 DIP2AQ14689 1571 aa6.5□□□□□ -1.37
EDEM3-203ENST00000439962 NWD1Q149M9 1564 aa6.5□□□□□ -1.37
EDEM3-203ENST00000439962 NLRP6P59044 892 aa6.5□□□□□ -1.37
EDEM3-203ENST00000439962 XRN1Q8IZH2 1706 aaKnown RBP6.49□□□□□ -1.37
EDEM3-203ENST00000439962 GPRASP1Q5JY77 1395 aa6.49□□□□□ -1.37
EDEM3-203ENST00000439962 KTN1Q86UP2 1357 aaKnown RBP6.49□□□□□ -1.37
EDEM3-203ENST00000439962 PRDM11Q9NQV5 511 aa6.49□□□□□ -1.37
EDEM3-203ENST00000439962 MYOM2P54296 1465 aa6.49□□□□□ -1.37
EDEM3-203ENST00000439962 PPM1GO15355 546 aaPredicted RBP6.49□□□□□ -1.37
EDEM3-203ENST00000439962 ERICH6BQ5W0A0 696 aa6.49□□□□□ -1.37
EDEM3-203ENST00000439962 LTV1Q96GA3 475 aaPredicted RBP6.49□□□□□ -1.37
EDEM3-203ENST00000439962 EVC2Q86UK5 1308 aa6.49□□□□□ -1.37
EDEM3-203ENST00000439962 IQSEC2Q5JU85 1478 aa6.49□□□□□ -1.37
EDEM3-203ENST00000439962 CCDC7Q96M83 1385 aa6.49□□□□□ -1.37
EDEM3-203ENST00000439962 DDX10Q13206 875 aaKnown RBP6.48□□□□□ -1.37
EDEM3-203ENST00000439962 BTG4Q9NY30 223 aa6.48□□□□□ -1.37
EDEM3-203ENST00000439962 LRP6O75581 1613 aa6.48□□□□□ -1.37
EDEM3-203ENST00000439962 SETD1AO15047 1707 aaKnown RBP6.48□□□□□ -1.37
EDEM3-203ENST00000439962 ADGRB1O14514 1584 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms