RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 DLC1Q96QB1 1528 aa27.94■■■□□ 2.06
SEMA3B-206ENST00000439487 FAM135BQ49AJ0 1406 aa27.93■■■□□ 2.06
SEMA3B-206ENST00000439487 NBPF8Q3BBV2 869 aa27.93■■■□□ 2.06
SEMA3B-206ENST00000439487 SLAIN2Q9P270 581 aa27.93■■■□□ 2.06
SEMA3B-206ENST00000439487 DCCP43146 1447 aa27.92■■■□□ 2.06
SEMA3B-206ENST00000439487 ARHGEF28Q8N1W1 1705 aaKnown RBP27.92■■■□□ 2.06
SEMA3B-206ENST00000439487 PRAM1Q96QH2 718 aa27.92■■■□□ 2.06
SEMA3B-206ENST00000439487 ROBO1Q9Y6N7 1651 aa27.91■■■□□ 2.06
SEMA3B-206ENST00000439487 SAFB2Q14151 953 aaKnown RBP eCLIP27.9■■■□□ 2.06
SEMA3B-206ENST00000439487 POGKQ9P215 609 aa27.9■■■□□ 2.06
SEMA3B-206ENST00000439487 MST1RQ04912 1400 aa27.85■■■□□ 2.05
SEMA3B-206ENST00000439487 CDC42BPGQ6DT37 1551 aa27.85■■■□□ 2.05
SEMA3B-206ENST00000439487 HSPA1LP34931 641 aa27.83■■■□□ 2.05
SEMA3B-206ENST00000439487 ROCK2O75116 1388 aaKnown RBP27.83■■■□□ 2.05
SEMA3B-206ENST00000439487 FMN2Q9NZ56 1722 aa27.8■■■□□ 2.04
SEMA3B-206ENST00000439487 RGPD8O14715 1765 aaPredicted RBP27.79■■■□□ 2.04
SEMA3B-206ENST00000439487 C1orf167Q5SNV9 1468 aa27.79■■■□□ 2.04
SEMA3B-206ENST00000439487 MINK1Q8N4C8 1332 aaPredicted RBP27.79■■■□□ 2.04
SEMA3B-206ENST00000439487 TIMELESSQ9UNS1 1208 aa27.79■■■□□ 2.04
SEMA3B-206ENST00000439487 RALGAPBQ86X10 1494 aa27.77■■■□□ 2.04
SEMA3B-206ENST00000439487 NUTM2FA1L443 756 aa27.77■■■□□ 2.04
SEMA3B-206ENST00000439487 BRINP3Q76B58 766 aa27.77■■■□□ 2.04
SEMA3B-206ENST00000439487 HIRIP3Q9BW71 556 aaPredicted RBP27.77■■■□□ 2.04
SEMA3B-206ENST00000439487 ADGRB2O60241 1585 aa27.76■■■□□ 2.03
SEMA3B-206ENST00000439487 PHLPP1O60346 1717 aa27.75■■■□□ 2.03
SEMA3B-206ENST00000439487 GPRASP1Q5JY77 1395 aa27.75■■■□□ 2.03
SEMA3B-206ENST00000439487 QRICH2Q9H0J4 1663 aa27.73■■■□□ 2.03
SEMA3B-206ENST00000439487 ORAI2Q96SN7 254 aa27.73■■■□□ 2.03
SEMA3B-206ENST00000439487 CARD11Q9BXL7 1154 aa27.73■■■□□ 2.03
SEMA3B-206ENST00000439487 CENPJQ9HC77 1338 aaPredicted RBP27.71■■■□□ 2.03
SEMA3B-206ENST00000439487 NHSL1Q5SYE7 1610 aa27.69■■■□□ 2.02
SEMA3B-206ENST00000439487 AHDC1Q5TGY3 1603 aaPredicted RBP27.68■■■□□ 2.02
SEMA3B-206ENST00000439487 ESCO1Q5FWF5 840 aa27.68■■■□□ 2.02
SEMA3B-206ENST00000439487 WASLO00401 505 aaPredicted RBP27.67■■■□□ 2.02
SEMA3B-206ENST00000439487 USP32Q8NFA0 1604 aa27.67■■■□□ 2.02
SEMA3B-206ENST00000439487 DDX17Q92841 729 aaKnown RBP27.66■■■□□ 2.02
SEMA3B-206ENST00000439487 COL16A1Q07092 1604 aaPredicted RBP27.65■■■□□ 2.02
SEMA3B-206ENST00000439487 EIF3AQ14152 1382 aaKnown RBP27.64■■■□□ 2.02
SEMA3B-206ENST00000439487 CDK19Q9BWU1 502 aa27.62■■■□□ 2.01
SEMA3B-206ENST00000439487 TULP4Q9NRJ4 1543 aa27.62■■■□□ 2.01
SEMA3B-206ENST00000439487 ANKARQ7Z5J8 1434 aa27.61■■■□□ 2.01
SEMA3B-206ENST00000439487 KIF1AQ12756 1690 aa27.6■■■□□ 2.01
SEMA3B-206ENST00000439487 PRR36Q9H6K5 1346 aa27.6■■■□□ 2.01
SEMA3B-206ENST00000439487 PHF8Q9UPP1 1060 aa27.57■■■□□ 2
SEMA3B-206ENST00000439487 ITSN1Q15811 1721 aa27.57■■■□□ 2
SEMA3B-206ENST00000439487 FOXO3O43524 673 aa27.56■■■□□ 2
SEMA3B-206ENST00000439487 NUDT16Q96DE0 195 aaKnown RBP27.55■■■□□ 2
SEMA3B-206ENST00000439487 ATP7BP35670 1465 aa27.54■■■□□ 2
SEMA3B-206ENST00000439487 PMFBP1Q8TBY8 1022 aa27.54■■■□□ 2
SEMA3B-206ENST00000439487 NPHP3Q7Z494 1330 aa27.53■■■□□ 2
SEMA3B-206ENST00000439487 SRPK2P78362 688 aaKnown RBP27.53■■■□□ 2
SEMA3B-206ENST00000439487 CABP2Q9NPB3 220 aa27.53■■■□□ 2
SEMA3B-206ENST00000439487 SOS2Q07890 1332 aaPredicted RBP27.52■■■□□ 2
SEMA3B-206ENST00000439487 XPCQ01831 940 aaPredicted RBP27.52■■■□□ 2
SEMA3B-206ENST00000439487 TOPAZ1Q8N9V7 1692 aa27.52■■■□□ 2
SEMA3B-206ENST00000439487 EVC2Q86UK5 1308 aa27.51■■□□□ 1.99
SEMA3B-206ENST00000439487 JCADQ9P266 1359 aa27.5■■□□□ 1.99
SEMA3B-206ENST00000439487 SHPRHQ149N8 1683 aa27.5■■□□□ 1.99
SEMA3B-206ENST00000439487 ST20-MTHFSA0A0A6YYL1 179 aa27.5■■□□□ 1.99
SEMA3B-206ENST00000439487 PXDNQ92626 1479 aa27.5■■□□□ 1.99
SEMA3B-206ENST00000439487 USP47Q96K76 1375 aa27.49■■□□□ 1.99
SEMA3B-206ENST00000439487 LRRC59Q96AG4 307 aaKnown RBP27.49■■□□□ 1.99
SEMA3B-206ENST00000439487 SBNO2Q9Y2G9 1366 aa27.48■■□□□ 1.99
SEMA3B-206ENST00000439487 KRT28Q7Z3Y7 464 aa27.46■■□□□ 1.99
SEMA3B-206ENST00000439487 CCDC61Q9Y6R9 512 aa27.46■■□□□ 1.99
SEMA3B-206ENST00000439487 PSME1Q06323 249 aa27.44■■□□□ 1.98
SEMA3B-206ENST00000439487 MED1Q15648 1581 aaPredicted RBP27.43■■□□□ 1.98
SEMA3B-206ENST00000439487 NGDNQ8NEJ9 315 aaKnown RBP27.43■■□□□ 1.98
SEMA3B-206ENST00000439487 TESK2Q96S53 571 aa27.43■■□□□ 1.98
SEMA3B-206ENST00000439487 PPIP5K1Q6PFW1 1433 aa27.41■■□□□ 1.98
SEMA3B-206ENST00000439487 PNPLA6Q8IY17 1366 aa27.41■■□□□ 1.98
SEMA3B-206ENST00000439487 PLEKHG3A1L390 1219 aa27.4■■□□□ 1.98
SEMA3B-206ENST00000439487 TRPM3Q9HCF6 1732 aaPredicted RBP27.39■■□□□ 1.98
SEMA3B-206ENST00000439487 ACEP12821 1306 aa27.39■■□□□ 1.97
SEMA3B-206ENST00000439487 CABP1Q9NZU7 370 aa27.38■■□□□ 1.97
SEMA3B-206ENST00000439487 SPATA31A6Q5VVP1 1343 aa27.37■■□□□ 1.97
SEMA3B-206ENST00000439487 SPATA31A3Q5VYP0 1347 aa27.37■■□□□ 1.97
SEMA3B-206ENST00000439487 POLR3AO14802 1390 aaPredicted RBP27.35■■□□□ 1.97
SEMA3B-206ENST00000439487 COL22A1Q8NFW1 1626 aaPredicted RBP27.35■■□□□ 1.97
SEMA3B-206ENST00000439487 NUTM2BA6NNL0 878 aaPredicted RBP27.35■■□□□ 1.97
SEMA3B-206ENST00000439487 NUTM2EB1AL46 878 aaPredicted RBP27.35■■□□□ 1.97
SEMA3B-206ENST00000439487 NUTM2AQ8IVF1 878 aaPredicted RBP27.35■■□□□ 1.97
SEMA3B-206ENST00000439487 SBNO1A3KN83 1393 aa27.35■■□□□ 1.97
SEMA3B-206ENST00000439487 ATAD2Q6PL18 1390 aa27.35■■□□□ 1.97
SEMA3B-206ENST00000439487 LRP6O75581 1613 aa27.34■■□□□ 1.97
SEMA3B-206ENST00000439487 TNS3Q68CZ2 1445 aa27.33■■□□□ 1.97
SEMA3B-206ENST00000439487 SLC24A1O60721 1099 aa27.32■■□□□ 1.96
SEMA3B-206ENST00000439487 EIF4G2P78344 907 aaKnown RBP eCLIP27.32■■□□□ 1.96
SEMA3B-206ENST00000439487 ALS2Q96Q42 1657 aa27.32■■□□□ 1.96
SEMA3B-206ENST00000439487 AKAP12Q02952 1782 aa27.32■■□□□ 1.96
SEMA3B-206ENST00000439487 HSPA5P11021 654 aaKnown RBP27.31■■□□□ 1.96
SEMA3B-206ENST00000439487 TMF1P82094 1093 aa27.31■■□□□ 1.96
SEMA3B-206ENST00000439487 LMOD2Q6P5Q4 547 aa27.31■■□□□ 1.96
SEMA3B-206ENST00000439487 PAK3O75914 559 aaPredicted RBP27.3■■□□□ 1.96
SEMA3B-206ENST00000439487 PUS7Q96PZ0 661 aaKnown RBP27.29■■□□□ 1.96
SEMA3B-206ENST00000439487 TMC1Q8TDI8 760 aa27.27■■□□□ 1.96
SEMA3B-206ENST00000439487 PLEKHG5O94827 1062 aa27.26■■□□□ 1.95
SEMA3B-206ENST00000439487 MEX3CQ5U5Q3 659 aaKnown RBP27.26■■□□□ 1.95
SEMA3B-206ENST00000439487 ARHGEF10O15013 1369 aa27.25■■□□□ 1.95
SEMA3B-206ENST00000439487 PHF23Q9BUL5 403 aaPredicted RBP27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms