RNA–Protein interactions for RNA: ENST00000439338.5

UBE2F-212, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 873 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-212ENST00000439338 SIRT1Q96EB6 747 aa29.74■■■□□ 2.35
UBE2F-212ENST00000439338 DLC1Q96QB1 1528 aa29.74■■■□□ 2.35
UBE2F-212ENST00000439338 SIN3AQ96ST3 1273 aa29.72■■■□□ 2.35
UBE2F-212ENST00000439338 JCADQ9P266 1359 aa29.72■■■□□ 2.35
UBE2F-212ENST00000439338 PRAM1Q96QH2 718 aa29.69■■■□□ 2.34
UBE2F-212ENST00000439338 FMN2Q9NZ56 1722 aa29.68■■■□□ 2.34
UBE2F-212ENST00000439338 DDX17Q92841 729 aaKnown RBP29.67■■■□□ 2.34
UBE2F-212ENST00000439338 ORAI2Q96SN7 254 aa29.67■■■□□ 2.34
UBE2F-212ENST00000439338 TRAK1Q9UPV9 953 aa29.67■■■□□ 2.34
UBE2F-212ENST00000439338 KIAA1210Q9ULL0 1709 aa29.67■■■□□ 2.34
UBE2F-212ENST00000439338 SAFB2Q14151 953 aaKnown RBP eCLIP29.66■■■□□ 2.34
UBE2F-212ENST00000439338 PHF23Q9BUL5 403 aaPredicted RBP29.66■■■□□ 2.34
UBE2F-212ENST00000439338 SHPRHQ149N8 1683 aa29.66■■■□□ 2.34
UBE2F-212ENST00000439338 NEUROD1Q13562 356 aa29.65■■■□□ 2.34
UBE2F-212ENST00000439338 ILDR2Q71H61 639 aa29.65■■■□□ 2.34
UBE2F-212ENST00000439338 POGKQ9P215 609 aa29.65■■■□□ 2.34
UBE2F-212ENST00000439338 NUTM2FA1L443 756 aa29.63■■■□□ 2.33
UBE2F-212ENST00000439338 L3MBTL2Q969R5 705 aa29.62■■■□□ 2.33
UBE2F-212ENST00000439338 ARHGEF28Q8N1W1 1705 aaKnown RBP29.62■■■□□ 2.33
UBE2F-212ENST00000439338 ESCO1Q5FWF5 840 aa29.6■■■□□ 2.33
UBE2F-212ENST00000439338 ADGRB2O60241 1585 aa29.6■■■□□ 2.33
UBE2F-212ENST00000439338 SPATA31A6Q5VVP1 1343 aa29.56■■■□□ 2.32
UBE2F-212ENST00000439338 RGPD8O14715 1765 aaPredicted RBP29.56■■■□□ 2.32
UBE2F-212ENST00000439338 LRP6O75581 1613 aa29.56■■■□□ 2.32
UBE2F-212ENST00000439338 NBPF1Q3BBV0 1214 aa29.55■■■□□ 2.32
UBE2F-212ENST00000439338 LRRC59Q96AG4 307 aaKnown RBP29.55■■■□□ 2.32
UBE2F-212ENST00000439338 SOS2Q07890 1332 aaPredicted RBP29.54■■■□□ 2.32
UBE2F-212ENST00000439338 MINK1Q8N4C8 1332 aaPredicted RBP29.53■■■□□ 2.32
UBE2F-212ENST00000439338 KIF1AQ12756 1690 aa29.53■■■□□ 2.32
UBE2F-212ENST00000439338 HIRIP3Q9BW71 556 aaPredicted RBP29.52■■■□□ 2.32
UBE2F-212ENST00000439338 PNPLA6Q8IY17 1366 aa29.52■■■□□ 2.32
UBE2F-212ENST00000439338 NPHP3Q7Z494 1330 aa29.51■■■□□ 2.32
UBE2F-212ENST00000439338 USP32Q8NFA0 1604 aa29.5■■■□□ 2.31
UBE2F-212ENST00000439338 TRPM1Q7Z4N2 1603 aa29.49■■■□□ 2.31
UBE2F-212ENST00000439338 PXDNQ92626 1479 aa29.49■■■□□ 2.31
UBE2F-212ENST00000439338 RGS17Q9UGC6 210 aaPredicted RBP29.49■■■□□ 2.31
UBE2F-212ENST00000439338 FOXO3O43524 673 aa29.48■■■□□ 2.31
UBE2F-212ENST00000439338 ANKARQ7Z5J8 1434 aa29.47■■■□□ 2.31
UBE2F-212ENST00000439338 NUTM2BA6NNL0 878 aaPredicted RBP29.46■■■□□ 2.31
UBE2F-212ENST00000439338 NUTM2EB1AL46 878 aaPredicted RBP29.46■■■□□ 2.31
UBE2F-212ENST00000439338 XPCQ01831 940 aaPredicted RBP29.46■■■□□ 2.31
UBE2F-212ENST00000439338 NUTM2AQ8IVF1 878 aaPredicted RBP29.46■■■□□ 2.31
UBE2F-212ENST00000439338 MEX3CQ5U5Q3 659 aaKnown RBP29.45■■■□□ 2.31
UBE2F-212ENST00000439338 TULP4Q9NRJ4 1543 aa29.45■■■□□ 2.3
UBE2F-212ENST00000439338 PHF8Q9UPP1 1060 aa29.44■■■□□ 2.3
UBE2F-212ENST00000439338 EIF3AQ14152 1382 aaKnown RBP29.43■■■□□ 2.3
UBE2F-212ENST00000439338 WASLO00401 505 aaPredicted RBP29.43■■■□□ 2.3
UBE2F-212ENST00000439338 TONSLQ96HA7 1378 aa29.42■■■□□ 2.3
UBE2F-212ENST00000439338 COL22A1Q8NFW1 1626 aaPredicted RBP29.4■■■□□ 2.3
UBE2F-212ENST00000439338 PRR36Q9H6K5 1346 aa29.4■■■□□ 2.3
UBE2F-212ENST00000439338 PCGF6Q9BYE7 350 aa29.38■■■□□ 2.29
UBE2F-212ENST00000439338 ROCK2O75116 1388 aaKnown RBP29.38■■■□□ 2.29
UBE2F-212ENST00000439338 NBPF8Q3BBV2 869 aa29.37■■■□□ 2.29
UBE2F-212ENST00000439338 PMFBP1Q8TBY8 1022 aa29.36■■■□□ 2.29
UBE2F-212ENST00000439338 QRICH2Q9H0J4 1663 aa29.36■■■□□ 2.29
UBE2F-212ENST00000439338 POTEAQ6S8J7 498 aa29.35■■■□□ 2.29
UBE2F-212ENST00000439338 KRT28Q7Z3Y7 464 aa29.35■■■□□ 2.29
UBE2F-212ENST00000439338 CENPJQ9HC77 1338 aaPredicted RBP29.35■■■□□ 2.29
UBE2F-212ENST00000439338 ATP7BP35670 1465 aa29.35■■■□□ 2.29
UBE2F-212ENST00000439338 ITSN1Q15811 1721 aa29.34■■■□□ 2.29
UBE2F-212ENST00000439338 CDK19Q9BWU1 502 aa29.32■■■□□ 2.28
UBE2F-212ENST00000439338 SPATA31A3Q5VYP0 1347 aa29.31■■■□□ 2.28
UBE2F-212ENST00000439338 SOCS7O14512 581 aa29.31■■■□□ 2.28
UBE2F-212ENST00000439338 TNS3Q68CZ2 1445 aa29.29■■■□□ 2.28
UBE2F-212ENST00000439338 GPRASP1Q5JY77 1395 aa29.29■■■□□ 2.28
UBE2F-212ENST00000439338 ADAMTS2O95450 1211 aa29.29■■■□□ 2.28
UBE2F-212ENST00000439338 PSME1Q06323 249 aa29.29■■■□□ 2.28
UBE2F-212ENST00000439338 NUDT16Q96DE0 195 aaKnown RBP29.29■■■□□ 2.28
UBE2F-212ENST00000439338 TOPAZ1Q8N9V7 1692 aa29.28■■■□□ 2.28
UBE2F-212ENST00000439338 C8orf37Q96NL8 207 aa29.28■■■□□ 2.28
UBE2F-212ENST00000439338 SBNO1A3KN83 1393 aa29.27■■■□□ 2.28
UBE2F-212ENST00000439338 AFF2P51816 1311 aa29.27■■■□□ 2.28
UBE2F-212ENST00000439338 RALGAPBQ86X10 1494 aa29.27■■■□□ 2.28
UBE2F-212ENST00000439338 TRPM3Q9HCF6 1732 aaPredicted RBP29.26■■■□□ 2.27
UBE2F-212ENST00000439338 ZNF772Q68DY9 489 aaPredicted RBP29.26■■■□□ 2.27
UBE2F-212ENST00000439338 NGDNQ8NEJ9 315 aaKnown RBP29.23■■■□□ 2.27
UBE2F-212ENST00000439338 MARF1Q9Y4F3 1742 aaKnown RBP29.23■■■□□ 2.27
UBE2F-212ENST00000439338 SRPK2P78362 688 aaKnown RBP29.2■■■□□ 2.26
UBE2F-212ENST00000439338 LMOD2Q6P5Q4 547 aa29.2■■■□□ 2.26
UBE2F-212ENST00000439338 CARD11Q9BXL7 1154 aa29.2■■■□□ 2.26
UBE2F-212ENST00000439338 ALS2Q96Q42 1657 aa29.19■■■□□ 2.26
UBE2F-212ENST00000439338 ARHGEF10O15013 1369 aa29.19■■■□□ 2.26
UBE2F-212ENST00000439338 NGLY1Q96IV0 654 aa29.19■■■□□ 2.26
UBE2F-212ENST00000439338 CABP2Q9NPB3 220 aa29.19■■■□□ 2.26
UBE2F-212ENST00000439338 CCDC61Q9Y6R9 512 aa29.19■■■□□ 2.26
UBE2F-212ENST00000439338 ABCA3Q99758 1704 aa29.18■■■□□ 2.26
UBE2F-212ENST00000439338 PLEKHG5O94827 1062 aa29.15■■■□□ 2.26
UBE2F-212ENST00000439338 CLSPNQ9HAW4 1339 aa29.15■■■□□ 2.26
UBE2F-212ENST00000439338 POLR3AO14802 1390 aaPredicted RBP29.14■■■□□ 2.26
UBE2F-212ENST00000439338 PPIP5K1Q6PFW1 1433 aa29.14■■■□□ 2.26
UBE2F-212ENST00000439338 ACEP12821 1306 aa29.14■■■□□ 2.25
UBE2F-212ENST00000439338 EVC2Q86UK5 1308 aa29.14■■■□□ 2.25
UBE2F-212ENST00000439338 PLEKHG3A1L390 1219 aa29.13■■■□□ 2.25
UBE2F-212ENST00000439338 CABLES1Q8TDN4 633 aa29.13■■■□□ 2.25
UBE2F-212ENST00000439338 PAK3O75914 559 aaPredicted RBP29.11■■■□□ 2.25
UBE2F-212ENST00000439338 HAP1P54257 671 aaPredicted RBP29.11■■■□□ 2.25
UBE2F-212ENST00000439338 FNBP4Q8N3X1 1017 aaPredicted RBP29.1■■■□□ 2.25
UBE2F-212ENST00000439338 USP21Q9UK80 565 aa29.1■■■□□ 2.25
UBE2F-212ENST00000439338 RXRBP28702 533 aa29.08■■■□□ 2.25
UBE2F-212ENST00000439338 QTRT2Q9H974 415 aaKnown RBP29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms