RNA–Protein interactions for RNA: ENST00000439004.1

C1orf140-202, Transcript of Putative uncharacterized protein C1orf140, humanhuman

TSL 1 (best) BASIC

Gene C1orf140, Length 4,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf140-202ENST00000439004 C1orf141Q5JVX7 400 aa7.41□□□□□ -1.22
C1orf140-202ENST00000439004 PPARGC1BQ86YN6 1023 aaKnown RBP7.41□□□□□ -1.22
C1orf140-202ENST00000439004 TRAK1Q9UPV9 953 aa7.41□□□□□ -1.22
C1orf140-202ENST00000439004 PREX1Q8TCU6 1659 aa7.41□□□□□ -1.22
C1orf140-202ENST00000439004 SEPT12Q8IYM1 358 aa7.41□□□□□ -1.22
C1orf140-202ENST00000439004 GJD4Q96KN9 370 aaPredicted RBP7.41□□□□□ -1.22
C1orf140-202ENST00000439004 ARHGEF12Q9NZN5 1544 aa7.4□□□□□ -1.22
C1orf140-202ENST00000439004 HIRIP3Q9BW71 556 aaPredicted RBP7.4□□□□□ -1.22
C1orf140-202ENST00000439004 BCORL1Q5H9F3 1711 aa7.4□□□□□ -1.22
C1orf140-202ENST00000439004 ABCC3O15438 1527 aa7.4□□□□□ -1.22
C1orf140-202ENST00000439004 AK7Q96M32 723 aa7.4□□□□□ -1.22
C1orf140-202ENST00000439004 SENP3-EIF4A1A0A087X0R7 540 aa7.4□□□□□ -1.23
C1orf140-202ENST00000439004 TMF1P82094 1093 aa7.4□□□□□ -1.23
C1orf140-202ENST00000439004 CCDC61Q9Y6R9 512 aa7.4□□□□□ -1.23
C1orf140-202ENST00000439004 GTF3C3Q9Y5Q9 886 aa7.39□□□□□ -1.23
C1orf140-202ENST00000439004 CEP170BQ9Y4F5 1589 aaPredicted RBP7.39□□□□□ -1.23
C1orf140-202ENST00000439004 PTCH1Q13635 1447 aa7.39□□□□□ -1.23
C1orf140-202ENST00000439004 KIF13AQ9H1H9 1805 aa7.39□□□□□ -1.23
C1orf140-202ENST00000439004 ABCC1P33527 1531 aa7.39□□□□□ -1.23
C1orf140-202ENST00000439004 PLCB2Q00722 1185 aa7.39□□□□□ -1.23
C1orf140-202ENST00000439004 TCP11L2Q8N4U5 519 aa7.38□□□□□ -1.23
C1orf140-202ENST00000439004 THRAP3Q9Y2W1 955 aaKnown RBP7.38□□□□□ -1.23
C1orf140-202ENST00000439004 SPG7Q9UQ90 795 aa7.38□□□□□ -1.23
C1orf140-202ENST00000439004 ARHGAP31Q2M1Z3 1444 aa7.38□□□□□ -1.23
C1orf140-202ENST00000439004 PPM1GO15355 546 aaPredicted RBP7.38□□□□□ -1.23
C1orf140-202ENST00000439004 GIGYF1O75420 1035 aaPredicted RBP7.37□□□□□ -1.23
C1orf140-202ENST00000439004 CCER1Q8TC90 406 aaPredicted RBP7.37□□□□□ -1.23
C1orf140-202ENST00000439004 SLC16A10Q8TF71 515 aa7.37□□□□□ -1.23
C1orf140-202ENST00000439004 TFCP2L1Q9NZI6 479 aa7.37□□□□□ -1.23
C1orf140-202ENST00000439004 BRD4O60885 1362 aaPredicted RBP7.37□□□□□ -1.23
C1orf140-202ENST00000439004 CARD11Q9BXL7 1154 aa7.37□□□□□ -1.23
C1orf140-202ENST00000439004 PARD3Q8TEW0 1356 aa7.37□□□□□ -1.23
C1orf140-202ENST00000439004 NSD3Q9BZ95 1437 aa7.37□□□□□ -1.23
C1orf140-202ENST00000439004 ERVK-7P63135 1459 aa7.37□□□□□ -1.23
C1orf140-202ENST00000439004 SAMD9Q5K651 1589 aa7.37□□□□□ -1.23
C1orf140-202ENST00000439004 SIRT1Q96EB6 747 aa7.37□□□□□ -1.23
C1orf140-202ENST00000439004 BTG4Q9NY30 223 aa7.37□□□□□ -1.23
C1orf140-202ENST00000439004 CABP2Q9NPB3 220 aa7.36□□□□□ -1.23
C1orf140-202ENST00000439004 KDM5CP41229 1560 aa7.36□□□□□ -1.23
C1orf140-202ENST00000439004 CENPJQ9HC77 1338 aaPredicted RBP7.36□□□□□ -1.23
C1orf140-202ENST00000439004 DCCP43146 1447 aa7.36□□□□□ -1.23
C1orf140-202ENST00000439004 ZC3H6P61129 1189 aaKnown RBP7.36□□□□□ -1.23
C1orf140-202ENST00000439004 FAM98CQ17RN3 349 aaKnown RBP7.36□□□□□ -1.23
C1orf140-202ENST00000439004 TTC5Q8N0Z6 440 aa7.36□□□□□ -1.23
C1orf140-202ENST00000439004 RTF1Q92541 710 aaKnown RBP7.36□□□□□ -1.23
C1orf140-202ENST00000439004 PRAM1Q96QH2 718 aa7.36□□□□□ -1.23
C1orf140-202ENST00000439004 MPHOSPH9Q99550 1183 aa7.36□□□□□ -1.23
C1orf140-202ENST00000439004 BRINP3Q76B58 766 aa7.36□□□□□ -1.23
C1orf140-202ENST00000439004 REREQ9P2R6 1566 aa7.36□□□□□ -1.23
C1orf140-202ENST00000439004 TRPM2O94759 1503 aa7.35□□□□□ -1.23
C1orf140-202ENST00000439004 LTKP29376 864 aa7.35□□□□□ -1.23
C1orf140-202ENST00000439004 XPCQ01831 940 aaPredicted RBP7.35□□□□□ -1.23
C1orf140-202ENST00000439004 VPS72Q15906 364 aa7.35□□□□□ -1.23
C1orf140-202ENST00000439004 PAXIP1Q6ZW49 1069 aaPredicted RBP7.35□□□□□ -1.23
C1orf140-202ENST00000439004 DPY19L2Q6NUT2 758 aa7.35□□□□□ -1.23
C1orf140-202ENST00000439004 UPF1Q92900 1129 aaKnown RBP eCLIP7.35□□□□□ -1.23
C1orf140-202ENST00000439004 SAMD9LQ8IVG5 1584 aa7.34□□□□□ -1.23
C1orf140-202ENST00000439004 CFAP44Q96MT7 982 aa7.34□□□□□ -1.23
C1orf140-202ENST00000439004 GPBP1L1Q9HC44 474 aaPredicted RBP7.34□□□□□ -1.23
C1orf140-202ENST00000439004 LTV1Q96GA3 475 aaPredicted RBP7.33□□□□□ -1.24
C1orf140-202ENST00000439004 CCDC87Q9NVE4 849 aa7.33□□□□□ -1.24
C1orf140-202ENST00000439004 KNSTRNQ9Y448 316 aa7.33□□□□□ -1.24
C1orf140-202ENST00000439004 PDZRN3Q9UPQ7 1066 aa7.33□□□□□ -1.24
C1orf140-202ENST00000439004 MAP3K1Q13233 1512 aa7.33□□□□□ -1.24
C1orf140-202ENST00000439004 ARHGEF6Q15052 776 aa7.33□□□□□ -1.24
C1orf140-202ENST00000439004 A0A087WZG4 1122 aa7.33□□□□□ -1.24
C1orf140-202ENST00000439004 ADGBQ8N7X0 1667 aa7.32□□□□□ -1.24
C1orf140-202ENST00000439004 CDK19Q9BWU1 502 aa7.32□□□□□ -1.24
C1orf140-202ENST00000439004 PARP3Q9Y6F1 533 aa7.32□□□□□ -1.24
C1orf140-202ENST00000439004 ADAMTSL3P82987 1691 aa7.32□□□□□ -1.24
C1orf140-202ENST00000439004 PLEKHO1Q53GL0 409 aaPredicted RBP7.32□□□□□ -1.24
C1orf140-202ENST00000439004 NUDT16Q96DE0 195 aaKnown RBP7.32□□□□□ -1.24
C1orf140-202ENST00000439004 BLMP54132 1417 aaPredicted RBP7.31□□□□□ -1.24
C1orf140-202ENST00000439004 PCGF6Q9BYE7 350 aa7.31□□□□□ -1.24
C1orf140-202ENST00000439004 TTC21AQ8NDW8 1320 aa7.31□□□□□ -1.24
C1orf140-202ENST00000439004 WASLO00401 505 aaPredicted RBP7.31□□□□□ -1.24
C1orf140-202ENST00000439004 ZPR1O75312 459 aa7.31□□□□□ -1.24
C1orf140-202ENST00000439004 DIP2CQ9Y2E4 1556 aa7.31□□□□□ -1.24
C1orf140-202ENST00000439004 DDX54Q8TDD1 881 aaKnown RBP7.31□□□□□ -1.24
C1orf140-202ENST00000439004 KDM2BQ8NHM5 1336 aa7.31□□□□□ -1.24
C1orf140-202ENST00000439004 KCNQ2O43526 872 aa7.31□□□□□ -1.24
C1orf140-202ENST00000439004 R3HDM1Q15032 1099 aaKnown RBP7.31□□□□□ -1.24
C1orf140-202ENST00000439004 ZNF652Q9Y2D9 606 aa7.31□□□□□ -1.24
C1orf140-202ENST00000439004 SOGA3Q5TF21 947 aa7.3□□□□□ -1.24
C1orf140-202ENST00000439004 ILDR2Q71H61 639 aa7.3□□□□□ -1.24
C1orf140-202ENST00000439004 CCDC7Q96M83 1385 aa7.3□□□□□ -1.24
C1orf140-202ENST00000439004 LMOD1P29536 600 aaPredicted RBP7.3□□□□□ -1.24
C1orf140-202ENST00000439004 ADGRL3Q9HAR2 1447 aa7.3□□□□□ -1.24
C1orf140-202ENST00000439004 KANK4Q5T7N3 995 aaPredicted RBP7.3□□□□□ -1.24
C1orf140-202ENST00000439004 ADRA2BP18089 450 aa7.29□□□□□ -1.24
C1orf140-202ENST00000439004 TEFQ10587 303 aa7.29□□□□□ -1.24
C1orf140-202ENST00000439004 PREX2Q70Z35 1606 aa7.29□□□□□ -1.24
C1orf140-202ENST00000439004 GOLGA2Q08379 1002 aa7.29□□□□□ -1.24
C1orf140-202ENST00000439004 FKBP8Q14318 412 aa7.29□□□□□ -1.24
C1orf140-202ENST00000439004 ZNF330Q9Y3S2 320 aaPredicted RBP7.29□□□□□ -1.24
C1orf140-202ENST00000439004 ARHGEF5Q12774 1597 aa7.29□□□□□ -1.24
C1orf140-202ENST00000439004 HRCP23327 699 aa7.29□□□□□ -1.24
C1orf140-202ENST00000439004 ZBTB47Q9UFB7 747 aaPredicted RBP7.29□□□□□ -1.24
C1orf140-202ENST00000439004 RAB3GAP2Q9H2M9 1393 aa7.28□□□□□ -1.24
C1orf140-202ENST00000439004 IL2RBP14784 551 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms