RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 ARHGEF5Q12774 1597 aa14.66□□□□□ -0.06
TRAPPC9-202ENST00000438773 CCDC61Q9Y6R9 512 aa14.65□□□□□ -0.06
TRAPPC9-202ENST00000438773 STK31Q9BXU1 1019 aa14.65□□□□□ -0.06
TRAPPC9-202ENST00000438773 SAMD9LQ8IVG5 1584 aa14.64□□□□□ -0.07
TRAPPC9-202ENST00000438773 TTC37Q6PGP7 1564 aa14.64□□□□□ -0.07
TRAPPC9-202ENST00000438773 ZKSCAN2Q63HK3 967 aa14.63□□□□□ -0.07
TRAPPC9-202ENST00000438773 NUDT16Q96DE0 195 aaKnown RBP14.63□□□□□ -0.07
TRAPPC9-202ENST00000438773 ZNF692Q9BU19 519 aaPredicted RBP14.63□□□□□ -0.07
TRAPPC9-202ENST00000438773 APBB1O00213 710 aa14.63□□□□□ -0.07
TRAPPC9-202ENST00000438773 ANKLE2Q86XL3 938 aa14.63□□□□□ -0.07
TRAPPC9-202ENST00000438773 PRKAR2BP31323 418 aa14.62□□□□□ -0.07
TRAPPC9-202ENST00000438773 MYO5CQ9NQX4 1742 aa14.62□□□□□ -0.07
TRAPPC9-202ENST00000438773 UHRF1BP1Q6BDS2 1440 aa14.62□□□□□ -0.07
TRAPPC9-202ENST00000438773 ATF3P18847 181 aa14.61□□□□□ -0.07
TRAPPC9-202ENST00000438773 SLC4A10Q6U841 1118 aa14.61□□□□□ -0.07
TRAPPC9-202ENST00000438773 ADGBQ8N7X0 1667 aa14.61□□□□□ -0.07
TRAPPC9-202ENST00000438773 POLR1AO95602 1720 aaPredicted RBP14.61□□□□□ -0.07
TRAPPC9-202ENST00000438773 NAP1L5Q96NT1 182 aaPredicted RBP14.6□□□□□ -0.07
TRAPPC9-202ENST00000438773 ABTB2Q8N961 1025 aa14.6□□□□□ -0.07
TRAPPC9-202ENST00000438773 OS9Q13438 667 aaPredicted RBP14.6□□□□□ -0.07
TRAPPC9-202ENST00000438773 BACH2Q9BYV9 841 aa14.6□□□□□ -0.07
TRAPPC9-202ENST00000438773 CENPQQ7L2Z9 268 aaPredicted RBP14.59□□□□□ -0.07
TRAPPC9-202ENST00000438773 ANP32BQ92688 251 aaKnown RBP14.59□□□□□ -0.07
TRAPPC9-202ENST00000438773 ESCO1Q5FWF5 840 aa14.59□□□□□ -0.07
TRAPPC9-202ENST00000438773 PROSER2Q86WR7 435 aaPredicted RBP14.59□□□□□ -0.07
TRAPPC9-202ENST00000438773 SLKQ9H2G2 1235 aaPredicted RBP14.59□□□□□ -0.07
TRAPPC9-202ENST00000438773 LRPPRCP42704 1394 aaKnown RBP14.59□□□□□ -0.07
TRAPPC9-202ENST00000438773 KDM5CP41229 1560 aa14.58□□□□□ -0.07
TRAPPC9-202ENST00000438773 MAST1Q9Y2H9 1570 aa14.58□□□□□ -0.07
TRAPPC9-202ENST00000438773 AMER1Q5JTC6 1135 aaPredicted RBP14.58□□□□□ -0.08
TRAPPC9-202ENST00000438773 CASC1Q6TDU7 716 aa14.58□□□□□ -0.08
TRAPPC9-202ENST00000438773 GZF1Q9H116 711 aaPredicted RBP14.58□□□□□ -0.08
TRAPPC9-202ENST00000438773 ZCCHC11Q5TAX3 1644 aaKnown RBP14.57□□□□□ -0.08
TRAPPC9-202ENST00000438773 RRS1Q15050 365 aaKnown RBP14.57□□□□□ -0.08
TRAPPC9-202ENST00000438773 TNRQ92752 1358 aa14.57□□□□□ -0.08
TRAPPC9-202ENST00000438773 WASLO00401 505 aaPredicted RBP14.57□□□□□ -0.08
TRAPPC9-202ENST00000438773 GNAI1P63096 354 aa14.57□□□□□ -0.08
TRAPPC9-202ENST00000438773 DZIP1LQ8IYY4 767 aaKnown RBP14.57□□□□□ -0.08
TRAPPC9-202ENST00000438773 PANK1Q8TE04 598 aa14.57□□□□□ -0.08
TRAPPC9-202ENST00000438773 PREX2Q70Z35 1606 aa14.56□□□□□ -0.08
TRAPPC9-202ENST00000438773 MEX3CQ5U5Q3 659 aaKnown RBP14.56□□□□□ -0.08
TRAPPC9-202ENST00000438773 AMOTL2Q9Y2J4 779 aa14.56□□□□□ -0.08
TRAPPC9-202ENST00000438773 CHMP4AQ9BY43 222 aa14.56□□□□□ -0.08
TRAPPC9-202ENST00000438773 DMRT2Q9Y5R5 561 aa14.56□□□□□ -0.08
TRAPPC9-202ENST00000438773 PRKCSHP14314 528 aaPredicted RBP14.56□□□□□ -0.08
TRAPPC9-202ENST00000438773 CFAP65Q6ZU64 1925 aaKnown RBP14.56□□□□□ -0.08
TRAPPC9-202ENST00000438773 NCLP19338 710 aaKnown RBP14.55□□□□□ -0.08
TRAPPC9-202ENST00000438773 TEFQ10587 303 aa14.55□□□□□ -0.08
TRAPPC9-202ENST00000438773 GLIPR1L2Q4G1C9 344 aa14.55□□□□□ -0.08
TRAPPC9-202ENST00000438773 TSR2Q969E8 191 aaKnown RBP14.55□□□□□ -0.08
TRAPPC9-202ENST00000438773 PER1O15534 1290 aaPredicted RBP14.55□□□□□ -0.08
TRAPPC9-202ENST00000438773 C20orf194Q5TEA3 1177 aa14.55□□□□□ -0.08
TRAPPC9-202ENST00000438773 NEO1Q92859 1461 aa14.55□□□□□ -0.08
TRAPPC9-202ENST00000438773 SULT6B1Q6IMI4 303 aa14.55□□□□□ -0.08
TRAPPC9-202ENST00000438773 BCAR3O75815 825 aa14.54□□□□□ -0.08
TRAPPC9-202ENST00000438773 ABCC1P33527 1531 aa14.54□□□□□ -0.08
TRAPPC9-202ENST00000438773 CDC42BPAQ5VT25 1732 aa14.54□□□□□ -0.08
TRAPPC9-202ENST00000438773 EXOSC9Q06265 439 aaKnown RBP14.54□□□□□ -0.08
TRAPPC9-202ENST00000438773 NME9Q86XW9 330 aa14.54□□□□□ -0.08
TRAPPC9-202ENST00000438773 GPRASP1Q5JY77 1395 aa14.54□□□□□ -0.08
TRAPPC9-202ENST00000438773 C1orf141Q5JVX7 400 aa14.53□□□□□ -0.08
TRAPPC9-202ENST00000438773 WWC1Q8IX03 1113 aa14.53□□□□□ -0.08
TRAPPC9-202ENST00000438773 EIF2AK4Q9P2K8 1649 aaKnown RBP14.53□□□□□ -0.08
TRAPPC9-202ENST00000438773 RBM33Q96EV2 1170 aaKnown RBP14.52□□□□□ -0.09
TRAPPC9-202ENST00000438773 DDX19BQ9UMR2 479 aa14.52□□□□□ -0.09
TRAPPC9-202ENST00000438773 PARD3Q8TEW0 1356 aa14.51□□□□□ -0.09
TRAPPC9-202ENST00000438773 WDR63Q8IWG1 891 aa14.51□□□□□ -0.09
TRAPPC9-202ENST00000438773 ARID3AQ99856 593 aa14.51□□□□□ -0.09
TRAPPC9-202ENST00000438773 YEATS2Q9ULM3 1422 aa14.51□□□□□ -0.09
TRAPPC9-202ENST00000438773 KIF16BQ96L93 1317 aa14.51□□□□□ -0.09
TRAPPC9-202ENST00000438773 SLFN5Q08AF3 891 aa14.51□□□□□ -0.09
TRAPPC9-202ENST00000438773 NECTIN2Q92692 538 aa14.51□□□□□ -0.09
TRAPPC9-202ENST00000438773 ZNF330Q9Y3S2 320 aaPredicted RBP14.51□□□□□ -0.09
TRAPPC9-202ENST00000438773 ZMYM3Q14202 1370 aa14.51□□□□□ -0.09
TRAPPC9-202ENST00000438773 TRIM44Q96DX7 344 aaPredicted RBP14.51□□□□□ -0.09
TRAPPC9-202ENST00000438773 TSPYL4Q9UJ04 414 aa14.51□□□□□ -0.09
TRAPPC9-202ENST00000438773 NPATQ14207 1427 aa14.51□□□□□ -0.09
TRAPPC9-202ENST00000438773 ATP10AO60312 1499 aa14.5□□□□□ -0.09
TRAPPC9-202ENST00000438773 BRPF3Q9ULD4 1205 aa14.5□□□□□ -0.09
TRAPPC9-202ENST00000438773 RIMS2Q9UQ26 1411 aa14.5□□□□□ -0.09
TRAPPC9-202ENST00000438773 CARD14Q9BXL6 1004 aa14.5□□□□□ -0.09
TRAPPC9-202ENST00000438773 ADCY10Q96PN6 1610 aa14.5□□□□□ -0.09
TRAPPC9-202ENST00000438773 FCHSD2O94868 740 aa14.5□□□□□ -0.09
TRAPPC9-202ENST00000438773 TMPOP42166 694 aaKnown RBP14.49□□□□□ -0.09
TRAPPC9-202ENST00000438773 HMMRO75330 724 aa14.49□□□□□ -0.09
TRAPPC9-202ENST00000438773 EMILIN1Q9Y6C2 1016 aa14.49□□□□□ -0.09
TRAPPC9-202ENST00000438773 EIF2S2P20042 333 aaKnown RBP14.49□□□□□ -0.09
TRAPPC9-202ENST00000438773 API5Q9BZZ5 524 aaKnown RBP14.49□□□□□ -0.09
TRAPPC9-202ENST00000438773 PHF23Q9BUL5 403 aaPredicted RBP14.48□□□□□ -0.09
TRAPPC9-202ENST00000438773 COL17A1Q9UMD9 1497 aaPredicted RBP14.48□□□□□ -0.09
TRAPPC9-202ENST00000438773 CLASP1Q7Z460 1538 aa14.48□□□□□ -0.09
TRAPPC9-202ENST00000438773 PIP4K2BP78356 416 aa14.47□□□□□ -0.09
TRAPPC9-202ENST00000438773 FYB1O15117 783 aa14.47□□□□□ -0.09
TRAPPC9-202ENST00000438773 FBLN1P23142 703 aa14.47□□□□□ -0.09
TRAPPC9-202ENST00000438773 NLRP2Q9NX02 1062 aa14.47□□□□□ -0.09
TRAPPC9-202ENST00000438773 XPCQ01831 940 aaPredicted RBP14.47□□□□□ -0.09
TRAPPC9-202ENST00000438773 ANKRD45Q5TZF3 282 aa14.46□□□□□ -0.09
TRAPPC9-202ENST00000438773 ANKRD36BQ8N2N9 1353 aa14.46□□□□□ -0.09
TRAPPC9-202ENST00000438773 ASXL1Q8IXJ9 1541 aa14.46□□□□□ -0.09
TRAPPC9-202ENST00000438773 PDE3AQ14432 1141 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms