RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 CCER1Q8TC90 406 aaPredicted RBP23.42■■□□□ 1.34
CTSD-205ENST00000438213 DLC1Q96QB1 1528 aa23.42■■□□□ 1.34
CTSD-205ENST00000438213 BRINP3Q76B58 766 aa23.41■■□□□ 1.34
CTSD-205ENST00000438213 KIAA1210Q9ULL0 1709 aa23.41■■□□□ 1.34
CTSD-205ENST00000438213 MST1RQ04912 1400 aa23.41■■□□□ 1.34
CTSD-205ENST00000438213 NALCNQ8IZF0 1738 aa23.4■■□□□ 1.34
CTSD-205ENST00000438213 ROBO1Q9Y6N7 1651 aa23.4■■□□□ 1.34
CTSD-205ENST00000438213 TIMELESSQ9UNS1 1208 aa23.37■■□□□ 1.33
CTSD-205ENST00000438213 C1orf167Q5SNV9 1468 aa23.36■■□□□ 1.33
CTSD-205ENST00000438213 NBPF8Q3BBV2 869 aa23.36■■□□□ 1.33
CTSD-205ENST00000438213 ESCO1Q5FWF5 840 aa23.35■■□□□ 1.33
CTSD-205ENST00000438213 MINK1Q8N4C8 1332 aaPredicted RBP23.34■■□□□ 1.33
CTSD-205ENST00000438213 NUTM2FA1L443 756 aa23.34■■□□□ 1.33
CTSD-205ENST00000438213 ORAI2Q96SN7 254 aa23.34■■□□□ 1.33
CTSD-205ENST00000438213 ROCK2O75116 1388 aaKnown RBP23.34■■□□□ 1.33
CTSD-205ENST00000438213 CDC42BPGQ6DT37 1551 aa23.33■■□□□ 1.33
CTSD-205ENST00000438213 HIRIP3Q9BW71 556 aaPredicted RBP23.32■■□□□ 1.32
CTSD-205ENST00000438213 WASLO00401 505 aaPredicted RBP23.29■■□□□ 1.32
CTSD-205ENST00000438213 CENPJQ9HC77 1338 aaPredicted RBP23.29■■□□□ 1.32
CTSD-205ENST00000438213 CARD11Q9BXL7 1154 aa23.28■■□□□ 1.32
CTSD-205ENST00000438213 TRPM1Q7Z4N2 1603 aa23.27■■□□□ 1.32
CTSD-205ENST00000438213 LRRC59Q96AG4 307 aaKnown RBP23.27■■□□□ 1.32
CTSD-205ENST00000438213 EIF3AQ14152 1382 aaKnown RBP23.27■■□□□ 1.31
CTSD-205ENST00000438213 PHLPP1O60346 1717 aa23.26■■□□□ 1.31
CTSD-205ENST00000438213 AHDC1Q5TGY3 1603 aaPredicted RBP23.26■■□□□ 1.31
CTSD-205ENST00000438213 DDX17Q92841 729 aaKnown RBP23.25■■□□□ 1.31
CTSD-205ENST00000438213 GPRASP1Q5JY77 1395 aa23.25■■□□□ 1.31
CTSD-205ENST00000438213 JCADQ9P266 1359 aa23.25■■□□□ 1.31
CTSD-205ENST00000438213 FOXO3O43524 673 aa23.24■■□□□ 1.31
CTSD-205ENST00000438213 NPHP3Q7Z494 1330 aa23.24■■□□□ 1.31
CTSD-205ENST00000438213 ARHGEF28Q8N1W1 1705 aaKnown RBP23.24■■□□□ 1.31
CTSD-205ENST00000438213 CDK19Q9BWU1 502 aa23.23■■□□□ 1.31
CTSD-205ENST00000438213 PHF8Q9UPP1 1060 aa23.23■■□□□ 1.31
CTSD-205ENST00000438213 FMN2Q9NZ56 1722 aa23.22■■□□□ 1.31
CTSD-205ENST00000438213 ANKARQ7Z5J8 1434 aa23.22■■□□□ 1.31
CTSD-205ENST00000438213 ADGRB2O60241 1585 aa23.22■■□□□ 1.31
CTSD-205ENST00000438213 RALGAPBQ86X10 1494 aa23.2■■□□□ 1.3
CTSD-205ENST00000438213 SOS2Q07890 1332 aaPredicted RBP23.2■■□□□ 1.3
CTSD-205ENST00000438213 NUDT16Q96DE0 195 aaKnown RBP23.19■■□□□ 1.3
CTSD-205ENST00000438213 COL16A1Q07092 1604 aaPredicted RBP23.19■■□□□ 1.3
CTSD-205ENST00000438213 PSME1Q06323 249 aa23.17■■□□□ 1.3
CTSD-205ENST00000438213 NHSL1Q5SYE7 1610 aa23.17■■□□□ 1.3
CTSD-205ENST00000438213 SPATA31A6Q5VVP1 1343 aa23.16■■□□□ 1.3
CTSD-205ENST00000438213 SRPK2P78362 688 aaKnown RBP23.16■■□□□ 1.3
CTSD-205ENST00000438213 KRT28Q7Z3Y7 464 aa23.16■■□□□ 1.3
CTSD-205ENST00000438213 PMFBP1Q8TBY8 1022 aa23.16■■□□□ 1.3
CTSD-205ENST00000438213 DISP3Q9P2K9 1392 aa23.15■■□□□ 1.3
CTSD-205ENST00000438213 EVC2Q86UK5 1308 aa23.15■■□□□ 1.3
CTSD-205ENST00000438213 PRR36Q9H6K5 1346 aa23.15■■□□□ 1.3
CTSD-205ENST00000438213 TULP4Q9NRJ4 1543 aa23.15■■□□□ 1.3
CTSD-205ENST00000438213 CCDC61Q9Y6R9 512 aa23.15■■□□□ 1.3
CTSD-205ENST00000438213 XPCQ01831 940 aaPredicted RBP23.14■■□□□ 1.29
CTSD-205ENST00000438213 NGDNQ8NEJ9 315 aaKnown RBP23.13■■□□□ 1.29
CTSD-205ENST00000438213 SLC24A1O60721 1099 aa23.11■■□□□ 1.29
CTSD-205ENST00000438213 PHF23Q9BUL5 403 aaPredicted RBP23.11■■□□□ 1.29
CTSD-205ENST00000438213 CABP2Q9NPB3 220 aa23.11■■□□□ 1.29
CTSD-205ENST00000438213 KIF1AQ12756 1690 aa23.11■■□□□ 1.29
CTSD-205ENST00000438213 RGPD8O14715 1765 aaPredicted RBP23.11■■□□□ 1.29
CTSD-205ENST00000438213 NUTM2BA6NNL0 878 aaPredicted RBP23.09■■□□□ 1.29
CTSD-205ENST00000438213 NUTM2EB1AL46 878 aaPredicted RBP23.09■■□□□ 1.29
CTSD-205ENST00000438213 NUTM2AQ8IVF1 878 aaPredicted RBP23.09■■□□□ 1.29
CTSD-205ENST00000438213 PLEKHG3A1L390 1219 aa23.08■■□□□ 1.29
CTSD-205ENST00000438213 PNPLA6Q8IY17 1366 aa23.08■■□□□ 1.29
CTSD-205ENST00000438213 PXDNQ92626 1479 aa23.08■■□□□ 1.29
CTSD-205ENST00000438213 MED1Q15648 1581 aaPredicted RBP23.08■■□□□ 1.29
CTSD-205ENST00000438213 QRICH2Q9H0J4 1663 aa23.08■■□□□ 1.29
CTSD-205ENST00000438213 USP32Q8NFA0 1604 aa23.08■■□□□ 1.28
CTSD-205ENST00000438213 MEX3CQ5U5Q3 659 aaKnown RBP23.07■■□□□ 1.28
CTSD-205ENST00000438213 SPATA31A3Q5VYP0 1347 aa23.07■■□□□ 1.28
CTSD-205ENST00000438213 ATP7BP35670 1465 aa23.06■■□□□ 1.28
CTSD-205ENST00000438213 SBNO2Q9Y2G9 1366 aa23.06■■□□□ 1.28
CTSD-205ENST00000438213 ST20-MTHFSA0A0A6YYL1 179 aa23.06■■□□□ 1.28
CTSD-205ENST00000438213 SHPRHQ149N8 1683 aa23.06■■□□□ 1.28
CTSD-205ENST00000438213 SBNO1A3KN83 1393 aa23.04■■□□□ 1.28
CTSD-205ENST00000438213 LMOD2Q6P5Q4 547 aa23.03■■□□□ 1.28
CTSD-205ENST00000438213 CABP1Q9NZU7 370 aa23.03■■□□□ 1.28
CTSD-205ENST00000438213 ACEP12821 1306 aa23.03■■□□□ 1.28
CTSD-205ENST00000438213 PAK3O75914 559 aaPredicted RBP23.01■■□□□ 1.27
CTSD-205ENST00000438213 USP47Q96K76 1375 aa23.01■■□□□ 1.27
CTSD-205ENST00000438213 PPIP5K1Q6PFW1 1433 aa23■■□□□ 1.27
CTSD-205ENST00000438213 ITSN1Q15811 1721 aa23■■□□□ 1.27
CTSD-205ENST00000438213 PUS7Q96PZ0 661 aaKnown RBP23■■□□□ 1.27
CTSD-205ENST00000438213 POLR3AO14802 1390 aaPredicted RBP23■■□□□ 1.27
CTSD-205ENST00000438213 TESK2Q96S53 571 aa22.99■■□□□ 1.27
CTSD-205ENST00000438213 ARHGEF10O15013 1369 aa22.99■■□□□ 1.27
CTSD-205ENST00000438213 ATAD2Q6PL18 1390 aa22.99■■□□□ 1.27
CTSD-205ENST00000438213 TNS3Q68CZ2 1445 aa22.99■■□□□ 1.27
CTSD-205ENST00000438213 ADAMTS2O95450 1211 aa22.97■■□□□ 1.27
CTSD-205ENST00000438213 HAP1P54257 671 aaPredicted RBP22.96■■□□□ 1.27
CTSD-205ENST00000438213 ZNF692Q9BU19 519 aaPredicted RBP22.96■■□□□ 1.27
CTSD-205ENST00000438213 LRP6O75581 1613 aa22.96■■□□□ 1.27
CTSD-205ENST00000438213 TMF1P82094 1093 aa22.95■■□□□ 1.26
CTSD-205ENST00000438213 ZNF772Q68DY9 489 aaPredicted RBP22.93■■□□□ 1.26
CTSD-205ENST00000438213 NGLY1Q96IV0 654 aa22.93■■□□□ 1.26
CTSD-205ENST00000438213 C8orf37Q96NL8 207 aa22.93■■□□□ 1.26
CTSD-205ENST00000438213 RGS17Q9UGC6 210 aaPredicted RBP22.93■■□□□ 1.26
CTSD-205ENST00000438213 BRD4O60885 1362 aaPredicted RBP22.92■■□□□ 1.26
CTSD-205ENST00000438213 EIF4G2P78344 907 aaKnown RBP eCLIP22.92■■□□□ 1.26
CTSD-205ENST00000438213 CDCA8Q53HL2 280 aa22.92■■□□□ 1.26
CTSD-205ENST00000438213 TMC1Q8TDI8 760 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms